Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 9.0e-78 293.5 147 100.0
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 8.8e-57 223.8 142 84.5
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 4.5e-37 158.3 85 92.9
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 1.1e-35 153.7 85 89.4
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.1e-35 153.7 85 89.4
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 3.5e-29 132.1 85 74.1
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 4.2e-27 125.2 85 70.6
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 1.6e-26 123.2 85 69.4
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 2.1e-26 122.9 85 70.6
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 1.8e-22 109.8 85 63.5
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 2.7e-21 105.9 85 57.6
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 2.7e-21 105.9 88 56.8
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 2.7e-21 105.9 85 57.6
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 2.7e-21 105.9 88 56.8
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 2.7e-21 105.9 88 56.8
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 4.5e-21 105.1 86 57.0
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 4.5e-21 105.1 86 57.0
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 1.0e-20 104.0 85 56.5
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.3e-20 103.6 85 57.6
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 3.8e-20 102.1 81 63.0
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 3.8e-20 102.1 85 58.8
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 1.5e-19 100.1 85 56.5
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 1.9e-19 99.8 86 54.7
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 1.9e-19 99.8 85 54.1
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 5.5e-19 98.2 85 52.9
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 5.5e-19 98.2 85 56.5
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 5.5e-19 98.2 85 55.3
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 7.2e-19 97.8 85 55.3
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 7.2e-19 97.8 86 57.0
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 9.5e-19 97.4 84 54.8
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 1.6e-18 96.7 85 52.9
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 2.1e-18 96.3 85 56.5
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 2.1e-18 96.3 85 56.5
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 2.1e-18 96.3 85 52.9
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.8e-18 95.9 93 51.6
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.8e-18 95.9 85 56.5
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 3.6e-18 95.5 85 52.9
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 6.1e-18 94.7 85 56.5
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 8.0e-18 94.4 85 55.3
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 2.3e-17 92.8 85 52.9
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 2.3e-17 92.8 85 54.1
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 2.3e-17 92.8 85 54.1
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 2.3e-17 92.8 85 52.9
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 3.0e-17 92.4 90 50.0
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 5.2e-17 91.7 78 57.7
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 5.2e-17 91.7 85 52.9
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 1.2e-16 90.5 85 50.6
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.2e-16 90.5 85 55.3
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 1.2e-16 90.5 85 54.1
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 1.5e-16 90.1 88 50.0
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 2.0e-16 89.7 85 50.6
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 3.4e-16 89.0 85 49.4
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 3.4e-16 89.0 85 47.1
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 5.7e-16 88.2 85 49.4
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 5.7e-16 88.2 85 51.8
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 7.5e-16 87.8 85 48.2
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 9.8e-16 87.4 81 50.6
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 1.3e-15 87.0 85 51.8
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 2.8e-15 85.9 85 48.2
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.8e-15 85.9 85 50.6
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 2.8e-15 85.9 85 50.6
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 6.3e-15 84.7 83 51.8
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 6.3e-15 84.7 85 47.1
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 6.3e-15 84.7 85 49.4
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 8.3e-15 84.3 85 47.1
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 8.3e-15 84.3 82 54.9
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 8.3e-15 84.3 86 50.0
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 1.1e-14 84.0 85 52.9
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 1.4e-14 83.6 85 48.2
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 1.8e-14 83.2 85 52.9
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 1.8e-14 83.2 86 45.3
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 2.4e-14 82.8 85 44.7
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 3.1e-14 82.4 85 43.5
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 4.1e-14 82.0 85 44.7
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 4.1e-14 82.0 85 49.4
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 5.4e-14 81.6 85 44.7
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 5.4e-14 81.6 82 47.6
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 7.0e-14 81.3 81 48.1
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 7.0e-14 81.3 85 48.2
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 9.2e-14 80.9 85 45.9
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 1.2e-13 80.5 86 44.2
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 1.2e-13 80.5 86 44.2
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 1.6e-13 80.1 81 49.4
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 1.6e-13 80.1 85 45.9
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 2.0e-13 79.7 83 49.4
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 2.7e-13 79.3 80 50.0
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 3.5e-13 79.0 74 51.4
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 5.9e-13 78.2 85 47.1
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 5.9e-13 78.2 82 45.1
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 1.0e-12 77.4 81 46.9
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 5.0e-12 75.1 86 48.8
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 1.1e-11 73.9 85 43.5
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 1.1e-11 73.9 104 39.4
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 1.5e-11 73.6 85 42.4
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 1.9e-11 73.2 85 41.2
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 2.5e-11 72.8 74 48.6
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 5.6e-11 71.6 64 53.1
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 2.1e-10 69.7 173 30.6
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 2.1e-10 69.7 85 42.4
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 2.8e-10 69.3 81 43.2
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 2.3e-09 66.2 89 41.6
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 2.3e-09 66.2 85 41.2
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 1.5e-08 63.5 60 55.0
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 2.0e-08 63.2 92 38.0
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 2.4e-06 56.2 85 32.9


User provided reference genes

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