Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 5.5e-173 610.9 319 100.0
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 1.8e-163 579.3 322 95.3
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.2e-162 576.6 322 95.3
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 1.1e-160 570.1 323 93.2
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 7.5e-138 494.2 321 81.0
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 4.9e-137 491.5 325 79.1
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 6.8e-123 444.5 236 97.0
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 3.4e-122 442.2 323 70.6
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 4.4e-122 441.8 323 70.3
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 4.4e-122 441.8 322 72.4
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 7.6e-122 441.0 325 71.1
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 2.9e-121 439.1 321 70.1
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 4.2e-120 435.3 321 68.5
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 2.7e-119 432.6 322 70.5
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 7.8e-119 431.0 329 68.7
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 1.3e-118 430.3 321 69.5
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 1.7e-118 429.9 323 69.0
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 3.0e-118 429.1 322 69.6
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 3.9e-118 428.7 326 69.0
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 5.1e-118 428.3 321 69.5
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 8.7e-118 427.6 324 69.1
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 8.7e-118 427.6 326 68.1
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.5e-117 426.8 322 68.6
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 1.9e-117 426.4 324 67.9
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 5.6e-117 424.9 320 67.8
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 7.3e-117 424.5 325 68.0
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 1.3e-116 423.7 325 68.9
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 1.3e-116 423.7 324 68.5
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 2.8e-116 422.5 325 68.9
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 4.8e-116 421.8 322 67.4
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 1.8e-115 419.9 313 69.6
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 5.3e-115 418.3 318 68.6
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 1.5e-114 416.8 319 66.5
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 1.5e-114 416.8 321 67.9
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 3.4e-114 415.6 321 66.4
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 7.6e-114 414.5 315 67.6
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 9.9e-114 414.1 317 68.5
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 1.3e-113 413.7 323 63.8
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 1.7e-113 413.3 322 65.5
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 1.7e-113 413.3 321 66.7
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 1.7e-113 413.3 326 64.4
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 2.2e-113 412.9 322 66.5
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 2.2e-113 412.9 321 66.7
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 2.9e-113 412.5 282 70.6
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 3.8e-113 412.1 321 66.7
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 3.8e-113 412.1 322 67.7
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 4.9e-113 411.8 318 66.7
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 4.9e-113 411.8 327 65.4
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 4.9e-113 411.8 272 73.2
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 6.4e-113 411.4 322 65.2
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 8.4e-113 411.0 321 64.2
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 1.4e-112 410.2 322 65.2
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 2.4e-112 409.5 291 68.7
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 5.4e-112 408.3 324 67.0
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 9.3e-112 407.5 274 73.0
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 9.3e-112 407.5 212 99.1
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 2.1e-111 406.4 297 66.7
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 1.0e-110 404.1 277 71.1
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 1.7e-110 403.3 328 65.5
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 2.3e-110 402.9 254 76.8
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 3.9e-110 402.1 321 64.2
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 1.1e-109 400.6 254 76.4
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 1.5e-109 400.2 333 64.9
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 1.9e-109 399.8 320 63.8
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 2.5e-109 399.4 344 62.8
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 7.3e-109 397.9 320 64.1
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 9.6e-109 397.5 324 63.6
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 3.6e-108 395.6 322 63.4
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 1.1e-107 394.0 319 64.3
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 1.2e-106 390.6 322 62.7
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 3.4e-106 389.0 362 58.0
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 6.4e-105 384.8 306 65.4
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 8.4e-105 384.4 333 61.6
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 7.1e-104 381.3 276 66.7
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 2.7e-103 379.4 321 61.4
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 1.0e-102 377.5 288 64.6
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 1.0e-102 377.5 322 62.1
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 1.1e-101 374.0 312 61.9
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 1.5e-101 373.6 270 67.4
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 1.9e-101 373.2 299 63.2
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 3.3e-101 372.5 299 63.5
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 2.8e-100 369.4 306 62.4
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 4.8e-100 368.6 301 62.5
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 1.1e-99 367.5 237 73.8
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 1.8e-99 366.7 326 61.3
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.8e-99 366.7 237 76.4
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 2.4e-99 366.3 249 69.1
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 5.3e-99 365.2 300 61.7
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.2e-98 364.0 234 75.6
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 2.6e-98 362.8 271 71.2
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 4.5e-98 362.1 251 69.7
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 4.1e-91 339.0 267 65.2
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 2.6e-90 336.3 212 75.0
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 8.4e-89 331.3 271 60.1
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.4e-88 330.5 299 58.5
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 3.5e-87 325.9 277 61.0
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 6.7e-86 321.6 255 62.0
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 5.9e-82 308.5 381 47.5
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 8.2e-76 288.1 281 51.6
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 1.2e-71 274.2 249 60.6
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 7.9e-71 271.6 219 65.8
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 2.6e-69 266.5 281 48.0
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 1.3e-68 264.2 300 46.3
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 4.1e-67 259.2 276 49.3
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 2.9e-65 253.1 243 51.9
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.1e-59 234.6 148 76.4
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 2.4e-51 206.8 268 40.7
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 7.0e-51 205.3 144 68.8
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 2.7e-42 176.8 105 80.0
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.3e-30 137.1 87 77.0
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 6.8e-30 135.6 87 77.0
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.0e-25 121.7 80 73.8
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 1.7e-20 104.4 73 68.5
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 8.3e-20 102.1 65 69.2
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.2e-19 100.1 64 70.3
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 1.2e-18 98.2 261 30.3
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 1.1e-08 65.1 158 38.6
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 1.4e-06 58.2 35 74.3
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 1.4e-06 58.2 36 72.2


User provided reference genes

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