Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.0e-82 310.1 160 100.0
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 1.1e-81 306.6 160 98.8
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 3.3e-81 305.1 160 98.8
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 3.3e-81 305.1 160 98.8
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 1.7e-69 266.2 165 85.5
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 6.6e-66 254.2 164 82.3
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 3.0e-58 228.8 161 79.5
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 8.6e-58 227.3 164 75.6
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 5.6e-57 224.6 156 77.6
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 2.8e-56 222.2 165 73.9
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 2.8e-56 222.2 159 76.7
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 3.6e-56 221.9 159 76.1
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 6.2e-56 221.1 162 75.3
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 6.2e-56 221.1 166 72.9
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 1.1e-55 220.3 163 75.5
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 2.3e-55 219.2 158 75.3
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 3.1e-55 218.8 170 74.1
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 5.2e-55 218.0 162 75.3
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 8.9e-55 217.2 158 72.2
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 8.9e-55 217.2 168 70.8
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.2e-54 216.9 160 74.4
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.2e-54 216.9 168 72.0
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 1.5e-54 216.5 162 74.1
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 1.5e-54 216.5 163 76.1
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 1.5e-54 216.5 162 74.7
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 1.5e-54 216.5 164 74.4
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 2.0e-54 216.1 160 72.5
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 2.6e-54 215.7 165 71.5
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 5.8e-54 214.5 139 78.4
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 5.8e-54 214.5 157 72.0
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 1.3e-53 213.4 164 75.6
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 1.3e-53 213.4 164 75.6
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.3e-53 213.4 158 75.3
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 1.3e-53 213.4 163 71.2
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 1.7e-53 213.0 162 72.2
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 3.7e-53 211.8 166 71.1
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 4.9e-53 211.5 137 79.6
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 6.4e-53 211.1 165 70.9
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 6.4e-53 211.1 135 77.8
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 6.4e-53 211.1 163 72.4
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 8.3e-53 210.7 162 72.2
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 8.3e-53 210.7 141 77.3
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 8.3e-53 210.7 135 78.5
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 8.3e-53 210.7 137 79.6
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 1.1e-52 210.3 161 73.3
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 1.1e-52 210.3 163 74.2
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 1.1e-52 210.3 161 73.3
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 1.4e-52 209.9 166 72.9
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 1.9e-52 209.5 165 69.1
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 1.9e-52 209.5 163 73.6
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 1.9e-52 209.5 163 73.6
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 1.9e-52 209.5 163 73.6
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 2.4e-52 209.1 166 71.1
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 3.2e-52 208.8 140 79.3
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 3.2e-52 208.8 163 71.8
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 3.2e-52 208.8 160 71.9
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 4.1e-52 208.4 159 71.7
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 4.1e-52 208.4 161 72.7
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 4.1e-52 208.4 161 72.7
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 4.1e-52 208.4 160 71.9
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 4.1e-52 208.4 139 78.4
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 5.4e-52 208.0 162 71.6
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 5.4e-52 208.0 162 71.6
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 9.2e-52 207.2 161 73.3
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 9.2e-52 207.2 161 73.3
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 1.2e-51 206.8 163 71.8
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.2e-51 206.8 136 81.6
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 1.2e-51 206.8 121 84.3
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.6e-51 206.5 157 70.7
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 2.1e-51 206.1 163 71.2
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 2.1e-51 206.1 153 73.2
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 2.7e-51 205.7 135 80.0
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 2.7e-51 205.7 139 78.4
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 4.6e-51 204.9 135 80.0
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 4.6e-51 204.9 158 69.0
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 6.0e-51 204.5 158 71.5
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 6.0e-51 204.5 158 71.5
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 6.0e-51 204.5 152 71.7
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 6.0e-51 204.5 137 78.1
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 7.8e-51 204.1 152 72.4
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 7.8e-51 204.1 161 70.8
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 1.0e-50 203.8 155 71.0
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.3e-50 203.4 150 73.3
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.7e-50 203.0 159 70.4
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 1.7e-50 203.0 133 76.7
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 2.3e-50 202.6 160 67.5
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 5.1e-50 201.4 162 67.3
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 5.1e-50 201.4 159 66.7
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 6.6e-50 201.1 162 67.3
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 6.6e-50 201.1 152 71.7
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 8.6e-50 200.7 139 77.0
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.1e-49 200.3 160 66.2
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 3.3e-49 198.7 163 69.9
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 3.3e-49 198.7 161 69.6
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 5.6e-49 198.0 162 66.7
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 2.8e-48 195.7 140 74.3
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 3.6e-48 195.3 137 73.7
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 3.6e-48 195.3 137 73.7
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 4.7e-48 194.9 137 73.7
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 8.1e-48 194.1 160 68.1
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.4e-47 193.4 168 66.7
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 1.4e-47 193.4 108 86.1
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 4.0e-47 191.8 108 88.0
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 5.2e-47 191.4 158 69.0
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 1.5e-46 189.9 101 92.1
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 2.0e-46 189.5 165 66.1
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 7.6e-46 187.6 99 92.9
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 1.7e-45 186.4 137 73.0
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 1.1e-44 183.7 139 69.8
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 4.2e-44 181.8 148 65.5
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 7.1e-44 181.0 158 62.0
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 1.7e-42 176.4 101 85.1
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.3e-42 176.0 151 64.9
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 1.2e-40 170.2 165 64.8
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 1.1e-39 167.2 153 63.4
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 2.9e-37 159.1 159 52.2
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 1.1e-36 157.1 97 74.2
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 7.8e-35 151.0 135 57.8
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 7.3e-33 144.4 118 62.7
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 9.6e-33 144.1 137 54.0
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 6.2e-32 141.4 159 55.3
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 1.2e-30 137.1 165 48.5
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 4.9e-29 131.7 74 85.1
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 1.1e-20 104.0 89 56.2
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 1.1e-17 94.0 53 88.7
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 2.5e-17 92.8 86 54.7
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 7.4e-17 91.3 51 90.2
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 7.4e-17 91.3 51 90.2
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 9.6e-17 90.9 97 50.5
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 2.1e-11 73.2 122 36.1
Potri.006G254200 Populus trichocarpa HOM05D005265 ORTHO05D006326 7.7e-06 54.7 130 33.1
MELO3C007091.2 Cucumis melo HOM05D005265 ORTHO05D006326 1.0e-05 54.3 120 35.0


User provided reference genes

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