Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 7.3e-79 297.0 132 100.0
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 6.8e-77 290.4 132 98.5
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 6.8e-77 290.4 132 98.5
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 6.8e-77 290.4 132 98.5
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 7.6e-76 287.0 132 97.0
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 2.4e-74 282.0 132 94.7
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.1e-73 278.9 145 89.0
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 2.1e-73 278.9 132 92.4
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 2.3e-72 275.4 132 90.9
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 3.3e-71 271.6 132 88.6
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 5.6e-71 270.8 132 88.6
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 5.6e-71 270.8 132 89.4
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 5.6e-71 270.8 132 87.9
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 5.6e-71 270.8 132 87.9
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 5.6e-71 270.8 132 89.4
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 9.6e-71 270.0 132 88.6
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 2.1e-70 268.9 132 88.6
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 2.1e-70 268.9 132 87.9
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 2.8e-70 268.5 132 87.9
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 2.8e-70 268.5 132 89.4
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 2.8e-70 268.5 132 87.9
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 2.8e-70 268.5 132 87.9
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 3.6e-70 268.1 132 87.9
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 3.6e-70 268.1 132 87.9
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 4.7e-70 267.7 132 89.4
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 4.7e-70 267.7 132 89.4
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 4.7e-70 267.7 132 89.4
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 4.7e-70 267.7 132 89.4
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 4.7e-70 267.7 132 87.1
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 4.7e-70 267.7 132 87.9
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 4.7e-70 267.7 132 87.9
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 6.2e-70 267.3 132 88.6
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 8.1e-70 266.9 133 90.2
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 8.1e-70 266.9 132 87.1
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 8.1e-70 266.9 132 87.1
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 8.1e-70 266.9 132 87.1
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 8.1e-70 266.9 132 88.6
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 8.1e-70 266.9 132 87.9
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 8.1e-70 266.9 132 85.6
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 8.1e-70 266.9 132 85.6
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 8.1e-70 266.9 132 89.4
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 8.1e-70 266.9 132 87.1
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 1.1e-69 266.5 132 87.9
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 1.1e-69 266.5 132 87.9
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 1.4e-69 266.2 131 89.3
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 1.4e-69 266.2 131 89.3
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 1.8e-69 265.8 132 87.9
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 1.8e-69 265.8 132 88.6
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 1.8e-69 265.8 132 88.6
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.8e-69 265.8 132 88.6
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 1.8e-69 265.8 132 87.1
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 1.8e-69 265.8 132 87.9
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 1.8e-69 265.8 132 87.1
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 2.4e-69 265.4 132 87.9
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 2.4e-69 265.4 132 88.6
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 2.4e-69 265.4 132 88.6
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 2.4e-69 265.4 132 86.4
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 3.1e-69 265.0 132 87.1
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 4.0e-69 264.6 132 87.1
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 4.0e-69 264.6 132 86.4
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 5.2e-69 264.2 132 87.1
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 5.2e-69 264.2 132 87.1
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 5.2e-69 264.2 132 87.1
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 5.2e-69 264.2 132 87.1
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 6.9e-69 263.8 132 87.9
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 8.9e-69 263.5 132 87.1
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 8.9e-69 263.5 132 87.1
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 1.2e-68 263.1 132 87.1
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.2e-68 263.1 132 86.4
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 1.2e-68 263.1 132 87.9
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 1.2e-68 263.1 132 86.4
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.5e-68 262.7 132 84.8
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.5e-68 262.7 132 85.6
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.5e-68 262.7 132 85.6
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 2.6e-68 261.9 132 87.1
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 3.4e-68 261.5 132 86.4
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 3.4e-68 261.5 132 85.6
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 4.4e-68 261.2 132 84.8
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 4.4e-68 261.2 132 88.6
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 4.4e-68 261.2 132 85.6
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 4.4e-68 261.2 132 84.8
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 5.8e-68 260.8 137 83.9
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 5.8e-68 260.8 129 89.1
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 5.8e-68 260.8 132 86.4
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 7.6e-68 260.4 132 84.8
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 7.6e-68 260.4 132 84.8
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 7.6e-68 260.4 132 86.4
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 1.3e-67 259.6 129 87.6
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.7e-67 259.2 132 84.8
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 2.2e-67 258.8 132 86.4
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 2.9e-67 258.5 132 84.8
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 3.8e-67 258.1 140 82.9
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 6.4e-67 257.3 153 75.8
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 8.4e-67 256.9 132 85.6
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 1.1e-66 256.5 153 77.1
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 1.1e-66 256.5 132 83.3
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 2.4e-66 255.4 153 75.8
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 1.9e-63 245.7 132 78.8
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 2.8e-62 241.9 120 89.2
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 3.1e-61 238.4 131 77.9
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 2.6e-60 235.3 132 75.0
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 1.9e-58 229.2 134 73.9
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 2.5e-55 218.8 133 70.7
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 9.9e-52 206.8 132 72.7
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 3.9e-48 194.9 129 68.2
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 3.9e-48 194.9 136 64.0
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 1.5e-47 193.0 102 83.3
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.9e-47 192.6 132 68.9
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 9.6e-47 190.3 132 69.7
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 3.1e-37 158.7 102 70.6
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 2.3e-32 142.5 83 80.7
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 4.5e-28 128.3 65 83.1
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 4.2e-26 121.7 132 50.0
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 2.3e-24 115.9 92 63.0
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 2.3e-24 115.9 58 82.8
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 2.0e-23 112.8 61 77.0
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 3.7e-22 108.6 56 80.4
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 6.3e-22 107.8 61 73.8
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 8.2e-22 107.5 50 92.0
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 6.7e-16 87.8 68 58.8
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 2.5e-10 69.3 43 72.1


User provided reference genes

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