Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2371 Fragaria x ananassa HOM05D000300 ORTHO05D008505 1.7e-56 222.6 129 100.0
FvH4_3g20100 Fragaria vesca HOM05D000300 ORTHO05D008505 2.5e-39 165.6 226 52.2
FAN21G2789 Fragaria x ananassa HOM05D000300 ORTHO05D008505 1.0e-37 160.2 223 52.9
FAN11G2262 Fragaria x ananassa HOM05D000300 ORTHO05D008505 1.4e-37 159.8 227 51.5
RcHm_v2.0_Chr5g0033901 Rosa chinensis HOM05D000300 ORTHO05D008505 4.5e-33 144.8 232 49.1
Prupe.4G183600 Prunus persica HOM05D000300 ORTHO05D008505 4.2e-31 138.3 65 96.9
vmacro11851 Vaccinium macrocarpon HOM05D000300 ORTHO05D008505 1.6e-30 136.3 65 95.4
Oeu060546.1 Olea europaea HOM05D000300 ORTHO05D008505 4.7e-30 134.8 65 95.4
Sabra11G0105000 Salix brachista HOM05D000300 ORTHO05D008505 4.7e-30 134.8 65 95.4
ECA240G3136 Erigeron canadensis HOM05D000300 ORTHO05D008505 6.1e-30 134.4 65 95.4
Potri.011G121000 Populus trichocarpa HOM05D000300 ORTHO05D008505 6.1e-30 134.4 65 95.4
Cpa.g.sc80.49 Carica papaya HOM05D000300 ORTHO05D008505 1.0e-29 133.7 65 93.8
Dinv04313 Davidia involucrata HOM05D000300 ORTHO05D008505 1.0e-29 133.7 65 93.8
HanXRQChr03g0078531 Helianthus annuus HOM05D000300 ORTHO05D008505 1.0e-29 133.7 65 93.8
Manes.03G111900 Manihot esculenta HOM05D000300 ORTHO05D008505 1.0e-29 133.7 65 93.8
Hma1.2p1_1738F.1_g299980 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 1.4e-29 133.3 65 93.8
MD03G1225800 Malus domestica HOM05D000300 ORTHO05D008505 1.4e-29 133.3 65 93.8
MD11G1245300 Malus domestica HOM05D000300 ORTHO05D008505 1.4e-29 133.3 65 93.8
Actinidia12817 Actinidia chinensis HOM05D000300 ORTHO05D008505 2.3e-29 132.5 65 93.8
Atru.chr2.2664 Acer truncatum HOM05D000300 ORTHO05D008505 3.0e-29 132.1 65 92.3
CSS0002162 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D008505 3.0e-29 132.1 65 92.3
Ciclev10007647m.g Citrus clementina HOM05D000300 ORTHO05D000383 4.0e-29 131.7 100 77.0
Duzib213G0972 Durio zibethinus HOM05D000300 ORTHO05D008505 4.0e-29 131.7 65 89.2
Thecc.07G080900 Theobroma cacao HOM05D000300 ORTHO05D008505 4.0e-29 131.7 65 89.2
Aqoxy1G02483 Aquilegia oxysepala HOM05D000300 ORTHO05D008505 5.2e-29 131.3 65 92.3
CANSAT56G2812 Cannabis sativa HOM05D000300 ORTHO05D008505 5.2e-29 131.3 65 92.3
Gohir.A04G028900 Gossypium hirsutum HOM05D000300 ORTHO05D008505 5.2e-29 131.3 65 90.8
Gohir.D05G358300 Gossypium hirsutum HOM05D000300 ORTHO05D008505 5.2e-29 131.3 65 90.8
Gorai.009G390800 Gossypium raimondii HOM05D000300 ORTHO05D008505 5.2e-29 131.3 65 90.8
Lsat_1_v5_gn_9_97040 Lactuca sativa HOM05D000300 ORTHO05D008505 6.8e-29 131.0 65 92.3
QL08p020830 Quercus lobata HOM05D000300 ORTHO05D008505 8.8e-29 130.6 65 92.3
Solyc12g013790.3 Solanum lycopersicum HOM05D000300 ORTHO05D008505 8.8e-29 130.6 65 89.2
Sopen12g007100 Solanum pennellii HOM05D000300 ORTHO05D008505 8.8e-29 130.6 65 89.2
PGSC0003DMG400015358 Solanum tuberosum HOM05D000300 ORTHO05D008505 8.8e-29 130.6 65 89.2
TWI38G1039 Tripterygium wilfordii HOM05D000300 ORTHO05D008505 8.8e-29 130.6 65 92.3
PGR031G2267 Punica granatum HOM05D000300 ORTHO05D008505 1.2e-28 130.2 65 92.3
Cc05_g12170 Coffea canephora HOM05D000300 ORTHO05D000383 1.5e-28 129.8 65 90.8
Hma1.2p1_1618F.1_g293900 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 1.5e-28 129.8 65 89.2
Lalb_Chr20g0109791 Lupinus albus HOM05D000300 ORTHO05D008505 2.0e-28 129.4 65 89.2
Lj3g0005060 Lotus japonicus HOM05D000300 ORTHO05D008505 2.6e-28 129.0 65 89.2
Nn1g06576 Nelumbo nucifera HOM05D000300 ORTHO05D008505 2.6e-28 129.0 65 90.8
Peaxi162Scf00000g00412 Petunia axillaris HOM05D000300 ORTHO05D008505 2.6e-28 129.0 65 87.7
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 3.4e-28 128.6 65 90.8
DCAR_013093 Daucus carota HOM05D000300 ORTHO05D008505 3.4e-28 128.6 65 90.8
PSO541G3772 Papaver somniferum HOM05D000300 ORTHO05D008505 4.4e-28 128.3 65 87.7
PSO675G9140 Papaver somniferum HOM05D000300 ORTHO05D008505 4.4e-28 128.3 65 87.7
Phvul.005G071500 Phaseolus vulgaris HOM05D000300 ORTHO05D008505 4.4e-28 128.3 65 89.2
Psat3g101080 Pisum sativum HOM05D000300 ORTHO05D008505 4.4e-28 128.3 65 89.2
VMungo1080G0699 Vigna mungo HOM05D000300 ORTHO05D008505 4.4e-28 128.3 65 89.2
Glyma.12G223300 Glycine max HOM05D000300 ORTHO05D008505 5.7e-28 127.9 65 87.7
Glyma.13G278100 Glycine max HOM05D000300 ORTHO05D008505 5.7e-28 127.9 65 87.7
GSVIVG01014363001 Vitis vinifera HOM05D000300 ORTHO05D000383 5.7e-28 127.9 101 74.3
arahy.Tifrunner.gnm1.ann1.UT5NS3 Arachis hypogaea HOM05D000300 ORTHO05D008505 7.5e-28 127.5 65 89.2
arahy.Tifrunner.gnm1.ann1.Z7GNQ3 Arachis hypogaea HOM05D000300 ORTHO05D008505 7.5e-28 127.5 65 89.2
ClCG10G006870 Citrullus lanatus HOM05D000300 ORTHO05D008505 7.5e-28 127.5 65 87.7
MELO3C016520.2 Cucumis melo HOM05D000300 ORTHO05D008505 7.5e-28 127.5 65 87.7
THA.LOC104813391 Tarenaya hassleriana HOM05D000300 ORTHO05D008505 7.5e-28 127.5 65 87.7
HPP92_025994 Vanilla planifolia HOM05D000300 ORTHO05D008505 7.5e-28 127.5 65 87.7
SalBow7G1295 Salvia bowleyana HOM05D000300 ORTHO05D008505 9.8e-28 127.1 65 89.2
SalBow7G3546 Salvia bowleyana HOM05D000300 ORTHO05D008505 9.8e-28 127.1 65 89.2
CiPaw.11G167900 Carya illinoinensis HOM05D000300 ORTHO05D008505 2.2e-27 125.9 65 89.2
CsaV3_3G006220 Cucumis sativus L. HOM05D000300 ORTHO05D008505 2.2e-27 125.9 65 86.2
Medtr2g079460 Medicago truncatula HOM05D000300 ORTHO05D008505 2.2e-27 125.9 65 87.7
Migut.M00819 Erythranthe guttata HOM05D000300 ORTHO05D008505 2.8e-27 125.6 65 86.2
Aa31LG3G10120 Aethionema arabicum HOM05D000300 ORTHO05D008505 3.7e-27 125.2 65 86.2
Os04g0530300 Oryza sativa ssp. japonica HOM05D000300 ORTHO05D008505 3.7e-27 125.2 64 89.1
Sed0021435 Sechium edule HOM05D000300 ORTHO05D008505 4.9e-27 124.8 65 86.2
TPR.G38968 Trifolium pratense HOM05D000300 ORTHO05D008505 4.9e-27 124.8 65 86.2
Zm00001eb075780 Zea mays HOM05D000300 ORTHO05D008505 4.9e-27 124.8 65 87.7
MSTRG.6839 Avicennia marina HOM05D000300 ORTHO05D008505 6.3e-27 124.4 65 87.7
Sc16g0006940 Simmondsia chinensis HOM05D000300 ORTHO05D008505 6.3e-27 124.4 65 86.2
MD11G1132100 Malus domestica HOM05D000300 ORTHO05D008505 1.1e-26 123.6 64 87.5
Carub.0008s1409 Capsella rubella HOM05D000300 ORTHO05D008505 7.0e-26 120.9 65 84.6
Thhalv10013922m.g Eutrema salsugineum HOM05D000300 ORTHO05D008505 7.0e-26 120.9 65 84.6
AL8G28840 Arabidopsis lyrata HOM05D000300 ORTHO05D008505 9.2e-26 120.6 65 84.6
AT5G53800 Arabidopsis thaliana HOM05D000300 ORTHO05D008505 9.2e-26 120.6 65 84.6
BcaB08g35739 Brassica carinata HOM05D000300 ORTHO05D008505 9.2e-26 120.6 65 83.1
BcaC04g20418 Brassica carinata HOM05D000300 ORTHO05D008505 9.2e-26 120.6 65 83.1
A10p11170 Brassica napus HOM05D000300 ORTHO05D008505 9.2e-26 120.6 65 83.1
C09p43740 Brassica napus HOM05D000300 ORTHO05D008505 9.2e-26 120.6 65 83.1
BolC9t57259H Brassica oleracea HOM05D000300 ORTHO05D008505 9.2e-26 120.6 65 83.1
BraA10t43209Z Brassica rapa HOM05D000300 ORTHO05D008505 9.2e-26 120.6 65 83.1
Sp6g15870 Schrenkiella parvula HOM05D000300 ORTHO05D008505 9.2e-26 120.6 65 83.1
Nitab4.5_0007374g0020 Nicotiana tabacum HOM05D000300 ORTHO05D008505 3.5e-25 118.6 81 70.4
SEGI_35024 Sequoiadendron giganteum HOM05D000300 ORTHO05D008505 4.5e-25 118.2 65 80.0
ATR0680G062 Amborella trichopoda HOM05D000300 ORTHO05D008505 2.5e-23 112.5 65 80.0
Mapoly0026s0140 Marchantia polymorpha HOM05D000300 ORTHO05D008505 7.3e-23 110.9 63 74.6
AagrBONN_evm.TU.Sc2ySwM_340.171 Anthoceros agrestis HOM05D000300 ORTHO05D008505 2.1e-22 109.4 63 73.0
Pp3c25_13690 Physcomitrium patens HOM05D000300 ORTHO05D008505 4.7e-22 108.2 65 75.4
SGA_v2.0_scaffold34G13828 Striga asiatica HOM05D000300 ORTHO05D008505 4.0e-21 105.1 98 59.2
CBR_g12199 Chara braunii HOM05D000300 ORTHO05D008505 1.2e-20 103.6 66 69.7
Haze_09412 Corylus avellana HOM05D000300 ORTHO05D008505 1.5e-20 103.2 65 78.5
Nitab4.5_0000662g0230 Nicotiana tabacum HOM05D000300 ORTHO05D008505 1.5e-20 103.2 52 86.5
Hund02219 Selenicereus undatus HOM05D000300 ORTHO05D008505 1.5e-20 103.2 54 85.2
MD11G1245600 Malus domestica HOM05D000300 ORTHO05D008505 3.4e-20 102.1 48 93.8
Rhsim06G0197200 Rhododendron simsii HOM05D000300 ORTHO05D008505 2.9e-19 99.0 46 97.8
Ah.04g164930 Amaranthus hybridus HOM05D000300 ORTHO05D008505 3.7e-19 98.6 54 77.8
unitig_747.g21571 Utricularia gibba HOM05D000300 ORTHO05D008505 1.4e-18 96.7 59 76.3
Ca_01834_v3 Cicer arietinum L. HOM05D000300 ORTHO05D008505 7.0e-18 94.4 125 48.0
CDE02G0965 Ceratophyllum demersum HOM05D000300 ORTHO05D008505 2.0e-17 92.8 46 91.3
SMO367G0821 Selaginella moellendorffii HOM05D000300 ORTHO05D008505 2.7e-17 92.4 48 81.2
Nn1g04059 Nelumbo nucifera HOM05D000300 ORTHO05D008505 3.0e-16 89.0 70 68.6
MCO10G111 Micromonas commoda HOM05D000300 ORTHO05D008505 7.5e-12 74.3 58 53.4
Cre03.g176050 Chlamydomonas reinhardtii HOM05D000300 ORTHO05D008505 2.2e-11 72.8 62 50.0
GSVIVG01014364001 Vitis vinifera HOM05D000300 ORTHO05D008505 7.0e-10 67.8 32 90.6
EL10Ac4g08146 Beta vulgaris HOM05D000300 ORTHO05D008505 3.6e-06 55.5 49 57.1


User provided reference genes

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