Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2272 Fragaria x ananassa HOM05D000462 ORTHO05D198862 8.4e-39 163.3 88 100.0
FvH4_3g08560 Fragaria vesca HOM05D000462 ORTHO05D003661 1.9e-35 152.1 88 95.5
FAN11G2527 Fragaria x ananassa HOM05D000462 ORTHO05D003661 1.9e-35 152.1 88 95.5
FAN16G0259 Fragaria x ananassa HOM05D000462 ORTHO05D003661 4.3e-35 151.0 89 94.4
FAN21G2365 Fragaria x ananassa HOM05D000462 ORTHO05D206211 9.6e-35 149.8 93 93.5
RcHm_v2.0_Chr5g0009281 Rosa chinensis HOM05D000462 ORTHO05D003661 2.5e-22 108.6 88 78.4
MD10G1289000 Malus domestica HOM05D000462 ORTHO05D003661 3.7e-18 94.7 90 70.0
MD05G1310100 Malus domestica HOM05D000462 ORTHO05D003661 3.4e-16 88.2 90 64.4
QL05p042292 Quercus lobata HOM05D000462 ORTHO05D003661 5.0e-15 84.3 92 62.0
QL05p042444 Quercus lobata HOM05D000462 ORTHO05D003661 5.0e-15 84.3 93 61.3
COL.COLO4_31417 Corchorus olitorius HOM05D000462 ORTHO05D003661 6.5e-15 84.0 88 61.4
Thecc.06G180900 Theobroma cacao HOM05D000462 ORTHO05D003661 8.5e-15 83.6 92 63.0
Gohir.A09G073600 Gossypium hirsutum HOM05D000462 ORTHO05D003661 1.9e-14 82.4 92 58.7
TWI38G2149 Tripterygium wilfordii HOM05D000462 ORTHO05D003661 7.2e-14 80.5 97 56.7
Duzib235G1455 Durio zibethinus HOM05D000462 ORTHO05D003661 1.2e-13 79.7 92 58.7
Gorai.006G088300 Gossypium raimondii HOM05D000462 ORTHO05D003661 1.2e-13 79.7 92 57.6
Gohir.A10G028000 Gossypium hirsutum HOM05D000462 ORTHO05D003661 3.6e-13 78.2 92 59.8
Manes.16G032200 Manihot esculenta HOM05D000462 ORTHO05D003661 3.6e-13 78.2 91 59.3
Atru.chr10.1797 Acer truncatum HOM05D000462 ORTHO05D003661 1.0e-12 76.6 92 56.5
Gohir.D09G073300 Gossypium hirsutum HOM05D000462 ORTHO05D003661 1.0e-12 76.6 92 56.5
PGR042G1640 Punica granatum HOM05D000462 ORTHO05D003661 1.8e-12 75.9 100 56.0
TWI63G1835 Tripterygium wilfordii HOM05D000462 ORTHO05D003661 1.8e-12 75.9 97 53.6
Ciclev10015416m.g Citrus clementina HOM05D000462 ORTHO05D003661 2.3e-12 75.5 96 54.2
Gohir.D10G028400 Gossypium hirsutum HOM05D000462 ORTHO05D003661 2.3e-12 75.5 92 57.6
Hma1.2p1_0558F.1_g178460 Hydrangea macrophylla HOM05D000462 ORTHO05D003661 2.3e-12 75.5 97 56.7
Sed0006869 Sechium edule HOM05D000462 ORTHO05D003661 2.3e-12 75.5 92 51.1
Gorai.011G030200 Gossypium raimondii HOM05D000462 ORTHO05D003661 3.9e-12 74.7 92 57.6
Sabra11G0040000 Salix brachista HOM05D000462 ORTHO05D003661 5.1e-12 74.3 92 57.6
Sp2g10970 Schrenkiella parvula HOM05D000462 ORTHO05D003661 8.8e-12 73.6 92 54.3
Potri.011G057800 Populus trichocarpa HOM05D000462 ORTHO05D003661 1.5e-11 72.8 92 58.7
Nitab4.5_0006826g0010 Nicotiana tabacum HOM05D000462 ORTHO05D003661 3.3e-11 71.6 91 58.2
Nitab4.5_0003315g0040 Nicotiana tabacum HOM05D000462 ORTHO05D003661 4.3e-11 71.2 93 55.9
Psat7g116120 Pisum sativum HOM05D000462 ORTHO05D003661 4.3e-11 71.2 89 55.1
A06p46170 Brassica napus HOM05D000462 ORTHO05D003661 7.4e-11 70.5 92 54.3
BraA06t27481Z Brassica rapa HOM05D000462 ORTHO05D003661 7.4e-11 70.5 92 54.3
Manes.17G049400 Manihot esculenta HOM05D000462 ORTHO05D003661 7.4e-11 70.5 91 53.8
Sabra04G0030700 Salix brachista HOM05D000462 ORTHO05D003661 7.4e-11 70.5 92 56.5
GSVIVG01021114001 Vitis vinifera HOM05D000462 ORTHO05D003661 9.7e-11 70.1 95 51.6
BcaC06g31496 Brassica carinata HOM05D000462 ORTHO05D003661 1.3e-10 69.7 91 52.7
SalBow8G4854 Salvia bowleyana HOM05D000462 ORTHO05D003661 3.7e-10 68.2 92 52.2
C07p29290 Brassica napus HOM05D000462 ORTHO05D003661 6.3e-10 67.4 92 53.3
Haze_06371 Corylus avellana HOM05D000462 ORTHO05D003661 6.3e-10 67.4 96 56.2
Thhalv10000901m.g Eutrema salsugineum HOM05D000462 ORTHO05D003661 6.3e-10 67.4 92 52.2
SalBow8G4614 Salvia bowleyana HOM05D000462 ORTHO05D003661 6.3e-10 67.4 92 52.2
CiPaw.09G063500 Carya illinoinensis HOM05D000462 ORTHO05D003661 1.1e-09 66.6 91 53.8
Nn1g06410 Nelumbo nucifera HOM05D000462 ORTHO05D003661 1.1e-09 66.6 95 51.6
DCAR_028054 Daucus carota HOM05D000462 ORTHO05D003661 1.4e-09 66.2 87 52.9
Aa31LG9G6780 Aethionema arabicum HOM05D000462 ORTHO05D003661 1.8e-09 65.9 95 49.5
Hund23810 Selenicereus undatus HOM05D000462 ORTHO05D003661 1.8e-09 65.9 100 53.0
Cpa.g.sc27.1 Carica papaya HOM05D000462 ORTHO05D003661 2.4e-09 65.5 98 53.1
AUR62031073 Chenopodium quinoa HOM05D000462 ORTHO05D003661 2.4e-09 65.5 93 47.3
BcaC03g16831 Brassica carinata HOM05D000462 ORTHO05D003661 4.1e-09 64.7 93 54.8
BolC7t43471H Brassica oleracea HOM05D000462 ORTHO05D003661 4.1e-09 64.7 92 52.2
MELO3C007259.2 Cucumis melo HOM05D000462 ORTHO05D003661 4.1e-09 64.7 99 50.5
Lalb_Chr05g0218571 Lupinus albus HOM05D000462 ORTHO05D003661 4.1e-09 64.7 92 52.2
CARHR175740 Cardamine hirsuta HOM05D000462 ORTHO05D003661 5.3e-09 64.3 94 50.0
Sopen10g004760 Solanum pennellii HOM05D000462 ORTHO05D003661 5.3e-09 64.3 102 47.1
arahy.Tifrunner.gnm1.ann1.012SKZ Arachis hypogaea HOM05D000462 ORTHO05D003661 6.9e-09 63.9 91 50.5
AUR62014867 Chenopodium quinoa HOM05D000462 ORTHO05D003661 9.1e-09 63.5 93 45.2
Oeu012154.1 Olea europaea HOM05D000462 ORTHO05D003661 1.2e-08 63.2 96 49.0
Sc17g0005940 Simmondsia chinensis HOM05D000462 ORTHO05D003661 1.2e-08 63.2 96 49.0
A02p29670 Brassica napus HOM05D000462 ORTHO05D003661 1.5e-08 62.8 90 54.4
BraA02t07992Z Brassica rapa HOM05D000462 ORTHO05D003661 1.5e-08 62.8 90 54.4
Cc02_g13860 Coffea canephora HOM05D000462 ORTHO05D003661 1.5e-08 62.8 99 45.5
Peaxi162Scf00490g00028 Petunia axillaris HOM05D000462 ORTHO05D003661 1.5e-08 62.8 97 52.6
arahy.Tifrunner.gnm1.ann1.IN1E3L Arachis hypogaea HOM05D000462 ORTHO05D003661 2.6e-08 62.0 91 49.5
EL10Ac8g20437 Beta vulgaris HOM05D000462 ORTHO05D003661 2.6e-08 62.0 91 47.3
ClCG01G023270 Citrullus lanatus HOM05D000462 ORTHO05D003661 3.4e-08 61.6 99 47.5
Migut.H01469 Erythranthe guttata HOM05D000462 ORTHO05D003661 3.4e-08 61.6 98 52.0
Lj1A1201T79 Lonicera japonica HOM05D000462 ORTHO05D003661 3.4e-08 61.6 97 50.5
Lj4g0010932 Lotus japonicus HOM05D000462 ORTHO05D003661 3.4e-08 61.6 93 53.8
AT5G46110 Arabidopsis thaliana HOM05D000462 ORTHO05D003661 4.5e-08 61.2 93 48.4
C02p47070 Brassica napus HOM05D000462 ORTHO05D003661 4.5e-08 61.2 90 54.4
BolC2t10755H Brassica oleracea HOM05D000462 ORTHO05D003661 4.5e-08 61.2 90 54.4
Rhsim02G0135000 Rhododendron simsii HOM05D000462 ORTHO05D003661 5.9e-08 60.8 99 50.5
TPR.G19915 Trifolium pratense HOM05D000462 ORTHO05D003661 7.7e-08 60.5 88 51.1
Ah.09g237580 Amaranthus hybridus HOM05D000462 ORTHO05D003661 1.0e-07 60.1 91 47.3
AL8G12380 Arabidopsis lyrata HOM05D000462 ORTHO05D003661 1.0e-07 60.1 95 48.4
Ca_18590_v3 Cicer arietinum L. HOM05D000462 ORTHO05D003661 1.3e-07 59.7 89 52.8
Actinidia07603 Actinidia chinensis HOM05D000462 ORTHO05D003661 1.7e-07 59.3 97 45.4
Actinidia26142 Actinidia chinensis HOM05D000462 ORTHO05D003661 1.7e-07 59.3 100 45.0
CSS0029967 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D003661 1.7e-07 59.3 102 47.1
MBI07_g38301_MAGBIO Magnolia biondii HOM05D000462 ORTHO05D003661 1.7e-07 59.3 91 50.5
PGSC0003DMG400022832 Solanum tuberosum HOM05D000462 ORTHO05D003661 1.7e-07 59.3 107 44.9
TAR624G1273 Trochodendron aralioides HOM05D000462 ORTHO05D003661 1.7e-07 59.3 96 46.9
Carub.0008s0182 Capsella rubella HOM05D000462 ORTHO05D003661 2.2e-07 58.9 94 48.9
CAN.G313.17 Capsicum annuum HOM05D000462 ORTHO05D003661 3.8e-07 58.2 96 44.8
Glyma.07G201300 Glycine max HOM05D000462 ORTHO05D003661 5.0e-07 57.8 92 50.0
VMungo0251G1211 Vigna mungo HOM05D000462 ORTHO05D003661 8.5e-07 57.0 92 50.0
Phvul.002G232300 Phaseolus vulgaris HOM05D000462 ORTHO05D003661 1.1e-06 56.6 92 48.9
Glyma.13G175100 Glycine max HOM05D000462 ORTHO05D003661 2.5e-06 55.5 93 50.5
Lsat_1_v5_gn_1_120800 Lactuca sativa HOM05D000462 ORTHO05D003661 4.2e-06 54.7 101 45.5


User provided reference genes

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