Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 5.2e-97 357.8 196 100.0
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 3.4e-96 355.1 196 99.0
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 5.7e-96 354.4 196 98.5
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 9.8e-96 353.6 196 98.5
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 9.8e-96 353.6 196 98.5
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 5.0e-92 341.3 196 93.4
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 6.6e-84 314.3 196 85.7
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 8.6e-84 313.9 196 86.2
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 3.3e-83 312.0 196 84.7
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 4.9e-79 298.1 195 81.0
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 1.0e-76 290.4 196 79.1
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 1.3e-76 290.0 196 79.6
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 2.3e-76 289.3 195 79.5
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 7.3e-75 284.3 194 78.9
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 2.3e-73 279.3 198 77.3
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 2.3e-73 279.3 198 77.3
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 3.1e-73 278.9 196 77.6
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 3.1e-73 278.9 197 76.6
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 4.0e-73 278.5 196 75.0
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 5.2e-73 278.1 195 75.4
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 5.2e-73 278.1 195 74.4
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 1.5e-72 276.6 196 75.0
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 2.0e-72 276.2 196 73.5
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 2.6e-72 275.8 196 73.0
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 2.6e-72 275.8 197 74.1
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 3.4e-72 275.4 197 75.6
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 3.4e-72 275.4 195 76.9
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 5.8e-72 274.6 196 74.0
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 7.5e-72 274.2 195 75.4
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 9.8e-72 273.9 199 76.4
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 9.8e-72 273.9 198 73.7
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 1.3e-71 273.5 194 77.8
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 1.3e-71 273.5 197 73.1
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 2.2e-71 272.7 199 76.4
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 2.2e-71 272.7 196 74.5
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 2.2e-71 272.7 194 75.8
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 3.7e-71 271.9 199 73.9
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 3.7e-71 271.9 198 77.3
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 3.7e-71 271.9 194 77.3
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 3.7e-71 271.9 192 76.6
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 3.7e-71 271.9 196 74.5
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 6.4e-71 271.2 198 74.7
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 6.4e-71 271.2 198 74.7
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 6.4e-71 271.2 198 74.7
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 6.4e-71 271.2 198 74.7
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 6.4e-71 271.2 199 77.9
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 6.4e-71 271.2 199 74.9
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 1.4e-70 270.0 195 75.4
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.4e-70 270.0 194 76.3
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 3.2e-70 268.9 198 74.2
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 3.2e-70 268.9 198 74.2
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 4.1e-70 268.5 192 74.0
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 4.1e-70 268.5 194 74.2
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 7.0e-70 267.7 199 72.9
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 9.2e-70 267.3 198 74.7
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 9.2e-70 267.3 192 74.5
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 9.2e-70 267.3 197 75.1
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.2e-69 266.9 198 75.8
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 2.1e-69 266.2 200 72.0
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 2.7e-69 265.8 197 74.6
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 4.6e-69 265.0 198 75.8
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 4.6e-69 265.0 199 72.4
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 6.0e-69 264.6 199 72.4
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.7e-68 263.1 192 72.9
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 6.6e-68 261.2 200 74.5
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.1e-67 260.4 197 72.1
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.9e-67 259.6 197 71.6
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 1.9e-67 259.6 195 70.3
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 2.5e-67 259.2 197 72.6
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 3.3e-67 258.8 198 71.2
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 3.3e-67 258.8 195 71.3
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 7.3e-67 257.7 196 74.5
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 1.6e-66 256.5 197 73.6
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 2.8e-66 255.8 196 69.4
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 2.8e-66 255.8 161 82.6
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 4.7e-66 255.0 197 71.6
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 1.8e-65 253.1 215 69.8
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 2.3e-65 252.7 202 70.8
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 3.1e-65 252.3 200 67.5
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 4.0e-65 251.9 197 71.6
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 4.0e-65 251.9 197 73.6
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 4.0e-65 251.9 195 69.2
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 4.0e-65 251.9 191 68.1
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 1.2e-64 250.4 191 67.5
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 1.2e-64 250.4 199 69.8
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 1.5e-64 250.0 192 69.8
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 1.5e-64 250.0 191 68.1
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 1.5e-64 250.0 193 69.4
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 2.6e-64 249.2 197 69.5
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.7e-63 246.5 196 68.9
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 2.2e-63 246.1 192 70.3
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 8.3e-63 244.2 193 69.4
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 1.4e-62 243.4 160 80.0
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 1.4e-62 243.4 147 85.7
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 3.2e-62 242.3 197 67.0
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 3.5e-61 238.8 195 67.2
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 2.4e-57 226.1 148 79.7
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 8.9e-57 224.2 194 59.8
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 4.4e-48 195.3 156 60.9
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 6.4e-47 191.4 200 52.0
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 2.5e-43 179.5 141 68.8
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 1.1e-41 174.1 157 55.4
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 6.4e-39 164.9 194 46.9
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 8.4e-39 164.5 194 46.9
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 1.1e-38 164.1 105 82.9
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.1e-38 164.1 194 46.9
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 2.4e-38 162.9 182 48.9
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.2e-38 162.5 194 46.4
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 3.5e-37 159.1 102 82.4
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 2.3e-36 156.4 103 81.6
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 4.3e-35 152.1 94 85.1
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 4.0e-33 145.6 103 77.7
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 1.3e-28 130.6 102 71.6
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 3.3e-27 125.9 90 76.7
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 2.4e-25 119.8 92 70.7
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 2.0e-24 116.7 86 66.3
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 6.5e-23 111.7 165 37.0
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 1.2e-21 107.5 71 78.9
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 1.3e-20 104.0 167 37.1
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 6.7e-20 101.7 95 65.3
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 5.9e-16 88.6 162 30.9
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.7e-15 87.0 72 58.3
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 1.9e-14 83.6 88 54.5
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 1.4e-12 77.4 156 35.9
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 2.2e-10 70.1 43 74.4
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 5.3e-09 65.5 91 40.7
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 3.4e-08 62.8 38 73.7


User provided reference genes

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