Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2151 Fragaria x ananassa HOM05D000023 ORTHO05D009195 1.5e-32 142.1 68 100.0
FvH4_2g24751 Fragaria vesca HOM05D000023 ORTHO05D009195 3.2e-14 81.3 39 92.3
FAN16G2502 Fragaria x ananassa HOM05D000023 ORTHO05D009195 3.6e-13 77.8 37 94.6
FvH4_3g30831 Fragaria vesca HOM05D017247 ORTHO05D009195 1.0e-12 76.3 40 82.5
FvH4_6g06672 Fragaria vesca HOM05D000023 ORTHO05D009195 1.0e-12 76.3 39 84.6
FvH4_3g32705 Fragaria vesca HOM05D000023 ORTHO05D009195 1.4e-12 75.9 40 85.0
RcHm_v2.0_Chr6g0251571 Rosa chinensis HOM05D000023 ORTHO05D000014 3.0e-12 74.7 39 79.5
FvH4_1g21381 Fragaria vesca HOM05D008281 ORTHO05D009195 8.8e-12 73.2 39 82.1
FvH4_3g29752 Fragaria vesca HOM05D000023 ORTHO05D009195 8.8e-12 73.2 42 76.2
RcHm_v2.0_Chr1g0314441 Rosa chinensis HOM05D000023 ORTHO05D000014 8.8e-12 73.2 39 79.5
FAN09G4181 Fragaria x ananassa HOM05D000023 ORTHO05D009195 2.0e-11 72.0 40 77.5
FvH4_6g28273 Fragaria vesca HOM05D000023 ORTHO05D009195 1.1e-09 66.2 39 69.2
Thhalv10022981m.g Eutrema salsugineum HOM05D000023 ORTHO05D000014 1.4e-09 65.9 65 55.4
Hma1.2p1_1153F.1_g262110 Hydrangea macrophylla HOM05D000023 ORTHO05D009195 3.5e-08 61.2 38 65.8
Hma1.2p1_2002F.1_g310750 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.9e-08 60.5 39 64.1
AL2G10350 Arabidopsis lyrata HOM05D001159 ORTHO05D009195 7.7e-08 60.1 39 66.7
Thhalv10026863m.g Eutrema salsugineum HOM05D000023 ORTHO05D000014 1.0e-07 59.7 50 58.0
FvH4_4g22271 Fragaria vesca HOM05D000047 ORTHO05D001383 1.0e-07 59.7 39 66.7
FvH4_5g39742 Fragaria vesca HOM05D000023 ORTHO05D000014 1.0e-07 59.7 39 66.7
BolC6t35411H Brassica oleracea HOM05D000023 ORTHO05D000014 1.3e-07 59.3 68 45.6
BraA05t19791Z Brassica rapa HOM05D000023 ORTHO05D000014 1.3e-07 59.3 67 47.8
BolC2t11716H Brassica oleracea HOM05D000023 ORTHO05D000014 1.7e-07 58.9 67 46.3
BolC9t58958H Brassica oleracea HOM05D000023 ORTHO05D000014 1.7e-07 58.9 67 47.8
BolC3t19320H Brassica oleracea HOM05D000023 ORTHO05D000014 2.3e-07 58.5 39 61.5
FAN02G2175 Fragaria x ananassa HOM05D000023 ORTHO05D009195 2.9e-07 58.2 39 64.1
BraA04t15802Z Brassica rapa HOM05D000023 ORTHO05D000014 3.8e-07 57.8 40 60.0
BraA05t21268Z Brassica rapa HOM05D000023 ORTHO05D009195 3.8e-07 57.8 41 58.5
Thhalv10002303m.g Eutrema salsugineum HOM05D000023 ORTHO05D000014 5.0e-07 57.4 48 58.3
Atru.chr12.1929 Acer truncatum HOM05D000023 ORTHO05D000014 8.6e-07 56.6 39 56.4
Atru.chr12.1937 Acer truncatum HOM05D000023 ORTHO05D000014 8.6e-07 56.6 39 56.4
AL1G48110 Arabidopsis lyrata HOM05D000023 ORTHO05D000014 8.6e-07 56.6 39 53.8
BolC6t36375H Brassica oleracea HOM05D000023 ORTHO05D000014 8.6e-07 56.6 40 55.0
BolC6t36377H Brassica oleracea HOM05D000023 ORTHO05D009195 8.6e-07 56.6 40 55.0
BraA03t15324Z Brassica rapa HOM05D000023 ORTHO05D009195 1.1e-06 56.2 39 51.3
Sp3g26510 Schrenkiella parvula HOM05D000023 ORTHO05D000014 1.9e-06 55.5 39 53.8
Sp5g19130 Schrenkiella parvula HOM05D000023 ORTHO05D000014 1.9e-06 55.5 39 53.8
C08p10210 Brassica napus HOM05D000023 ORTHO05D009195 2.5e-06 55.1 39 51.3
C03p79510 Brassica napus HOM05D000023 ORTHO05D009195 3.3e-06 54.7 41 56.1
Rhsim08G0134200 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.2e-06 54.3 58 46.6
Sp6g14040 Schrenkiella parvula HOM05D000023 ORTHO05D000014 4.2e-06 54.3 39 51.3
Ah.13g073040 Amaranthus hybridus HOM05D000023 ORTHO05D000014 5.5e-06 53.9 37 56.8
EL10Ac3g06256 Beta vulgaris HOM05D000023 ORTHO05D000014 5.5e-06 53.9 37 56.8
AUR62002557 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.5e-06 53.9 37 56.8
AUR62029977 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.5e-06 53.9 37 56.8
Rhsim01G0081000 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.5e-06 53.9 39 56.4
Rhsim05G0190500 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.5e-06 53.9 39 56.4
Hund22657 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.5e-06 53.9 37 56.8
Atru.chr1.1880 Acer truncatum HOM05D000023 ORTHO05D000014 7.2e-06 53.5 39 53.8
Atru.chr9.374 Acer truncatum HOM05D000023 ORTHO05D000014 7.2e-06 53.5 64 39.1
Aa31LG8G4400 Aethionema arabicum HOM05D000023 ORTHO05D000014 7.2e-06 53.5 37 56.8
C06p12270 Brassica napus HOM05D000023 ORTHO05D000014 7.2e-06 53.5 37 56.8
CANSAT80G1619 Cannabis sativa HOM05D000023 ORTHO05D000014 7.2e-06 53.5 37 56.8
Rhsim07G0175200 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.2e-06 53.5 38 57.9
Ciclev10004312m.g Citrus clementina HOM05D000023 ORTHO05D000014 9.5e-06 53.1 48 50.0


User provided reference genes

Program Settings