Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2105 Fragaria x ananassa HOM05D004490 ORTHO05D005353 5.8e-175 617.5 312 100.0
FAN21G1156 Fragaria x ananassa HOM05D004490 ORTHO05D005353 6.1e-84 315.1 185 88.1
FAN11G3016 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.9e-78 296.2 176 88.1
FvH4_3g44892 Fragaria vesca HOM05D004490 ORTHO05D005353 6.8e-59 231.9 166 77.7
RcHm_v2.0_Chr5g0082701 Rosa chinensis HOM05D004490 ORTHO05D005353 1.3e-54 217.6 166 74.7
RcHm_v2.0_Chr5g0081671 Rosa chinensis HOM05D004490 ORTHO05D005353 3.0e-54 216.5 165 73.9
MD04G1003500 Malus domestica HOM05D004490 ORTHO05D005353 1.5e-45 187.6 158 64.6
Prupe.8G058000 Prunus persica HOM05D004490 ORTHO05D005353 9.6e-45 184.9 157 66.9
RcHm_v2.0_Chr4g0398261 Rosa chinensis HOM05D004490 ORTHO05D005353 5.2e-43 179.1 160 65.0
Cfa018184 Carpinus fangiana HOM05D004490 ORTHO05D005353 1.3e-41 174.5 157 63.1
Cc10_g11460 Coffea canephora HOM05D004490 ORTHO05D005353 1.7e-41 174.1 157 62.4
Haze_17934 Corylus avellana HOM05D004490 ORTHO05D005353 2.9e-41 173.3 158 63.9
FAN11G0711 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.4e-40 171.0 141 68.8
arahy.Tifrunner.gnm1.ann1.2Y7GNB Arachis hypogaea HOM05D004490 ORTHO05D005353 2.4e-40 170.2 145 63.4
arahy.Tifrunner.gnm1.ann1.90XUFN Arachis hypogaea HOM05D004490 ORTHO05D005353 2.4e-40 170.2 145 63.4
FvH4_4g06470 Fragaria vesca HOM05D004490 ORTHO05D005353 2.4e-40 170.2 148 64.9
FAN12G1529 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.4e-40 170.2 148 64.9
Lalb_Chr21g0305821 Lupinus albus HOM05D004490 ORTHO05D005353 2.4e-40 170.2 144 63.2
Glyma.20G175700 Glycine max HOM05D004490 ORTHO05D005353 3.2e-40 169.9 147 65.3
Hma1.2p1_0363F.1_g136660 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 4.2e-40 169.5 157 59.2
Duzib177G0006 Durio zibethinus HOM05D004490 ORTHO05D005353 5.4e-40 169.1 157 62.4
Glyma.10G216200 Glycine max HOM05D004490 ORTHO05D005353 5.4e-40 169.1 150 64.0
Cpa.g.sc66.44 Carica papaya HOM05D004490 ORTHO05D005353 7.1e-40 168.7 155 58.1
FAN07G2233 Fragaria x ananassa HOM05D004490 ORTHO05D005353 7.1e-40 168.7 148 64.2
Ca_10614_v3 Cicer arietinum L. HOM05D004490 ORTHO05D005353 9.3e-40 168.3 158 60.8
FAN17G1649 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.2e-39 167.9 148 64.2
Phvul.007G089700 Phaseolus vulgaris HOM05D004490 ORTHO05D005353 1.6e-39 167.5 148 62.2
TWI63G0531 Tripterygium wilfordii HOM05D004490 ORTHO05D005353 1.6e-39 167.5 157 58.6
GSVIVG01034483001 Vitis vinifera HOM05D004490 ORTHO05D005353 1.6e-39 167.5 159 62.3
FvH4_3g44960 Fragaria vesca HOM05D004490 ORTHO05D005353 2.7e-39 166.8 110 86.4
CiPaw.16G061300 Carya illinoinensis HOM05D004490 ORTHO05D005353 3.5e-39 166.4 148 64.2
VMungo0720G0360 Vigna mungo HOM05D004490 ORTHO05D005353 3.5e-39 166.4 148 62.2
Gorai.013G140400 Gossypium raimondii HOM05D004490 ORTHO05D005353 6.0e-39 165.6 159 62.3
Psat6g187400 Pisum sativum HOM05D004490 ORTHO05D005353 6.0e-39 165.6 147 63.3
Lj5g0002115 Lotus japonicus HOM05D004490 ORTHO05D005353 7.8e-39 165.2 145 60.7
Medtr1g096410 Medicago truncatula HOM05D004490 ORTHO05D005353 7.8e-39 165.2 144 61.8
Eucgr.F04124 Eucalyptus grandis HOM05D004490 ORTHO05D005353 1.3e-38 164.5 157 60.5
Manes.02G191800 Manihot esculenta HOM05D004490 ORTHO05D005353 1.3e-38 164.5 145 62.1
SalBow7G0993 Salvia bowleyana HOM05D004490 ORTHO05D005353 1.3e-38 164.5 160 60.0
Ah.05g178090 Amaranthus hybridus HOM05D004490 ORTHO05D005353 1.7e-38 164.1 159 57.2
MELO3C024104.2 Cucumis melo HOM05D004490 ORTHO05D005353 1.7e-38 164.1 161 57.1
CsaV3_7G024020 Cucumis sativus L. HOM05D004490 ORTHO05D005353 1.7e-38 164.1 161 57.1
Gohir.D13G125400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 2.3e-38 163.7 159 61.0
Gohir.A13G121400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 3.9e-38 162.9 159 60.4
SalBow4G3000 Salvia bowleyana HOM05D004490 ORTHO05D005353 3.9e-38 162.9 160 59.4
ClCG09G010540 Citrullus lanatus HOM05D004490 ORTHO05D005353 5.1e-38 162.5 162 57.4
Lsat_1_v5_gn_5_105541 Lactuca sativa HOM05D004490 ORTHO05D005353 5.1e-38 162.5 159 55.3
EL10Ac1g00080 Beta vulgaris HOM05D004490 ORTHO05D005353 6.6e-38 162.2 159 57.9
Atru.chr12.1269 Acer truncatum HOM05D004490 ORTHO05D005353 1.1e-37 161.4 158 57.0
MSTRG.1522 Avicennia marina HOM05D004490 ORTHO05D005353 1.1e-37 161.4 157 57.3
THA.LOC104816311 Tarenaya hassleriana HOM05D004490 ORTHO05D005353 1.1e-37 161.4 162 56.8
Hund27085 Selenicereus undatus HOM05D004490 ORTHO05D005353 1.5e-37 161.0 149 60.4
TPR.G8816 Trifolium pratense HOM05D004490 ORTHO05D005353 1.9e-37 160.6 146 57.5
FvH4_3g44966 Fragaria vesca HOM05D004490 ORTHO05D005353 2.5e-37 160.2 109 82.6
Potri.019G083700 Populus trichocarpa HOM05D004490 ORTHO05D005353 4.3e-37 159.5 145 60.7
SGA_v2.0_scaffold118G32473 Striga asiatica HOM05D004490 ORTHO05D005353 7.3e-37 158.7 145 59.3
TAR208G0002 Trochodendron aralioides HOM05D004490 ORTHO05D005353 7.3e-37 158.7 148 59.5
CARHR056930 Cardamine hirsuta HOM05D004490 ORTHO05D005353 9.6e-37 158.3 164 55.5
Thecc.08G183200 Theobroma cacao HOM05D004490 ORTHO05D005353 9.6e-37 158.3 158 59.5
Aqoxy2G03181 Aquilegia oxysepala HOM05D004490 ORTHO05D005353 1.3e-36 157.9 160 53.8
EL10Ac1g00082 Beta vulgaris HOM05D004490 ORTHO05D005353 1.3e-36 157.9 163 55.8
Dinv41710 Davidia involucrata HOM05D004490 ORTHO05D005353 1.6e-36 157.5 160 58.1
Carub.0002s1095 Capsella rubella HOM05D004490 ORTHO05D005353 2.1e-36 157.1 164 54.3
QL02p033840 Quercus lobata HOM05D004490 ORTHO05D005353 2.1e-36 157.1 142 62.0
Migut.C01248 Erythranthe guttata HOM05D004490 ORTHO05D005353 3.6e-36 156.4 162 55.6
HanXRQChr10g0290501 Helianthus annuus HOM05D004490 ORTHO05D005353 4.8e-36 156.0 159 56.6
Sc23g0001210 Simmondsia chinensis HOM05D004490 ORTHO05D005353 6.2e-36 155.6 165 54.5
Ciclev10000724m.g Citrus clementina HOM05D004490 ORTHO05D005353 8.1e-36 155.2 145 61.4
ECA234G1973 Erigeron canadensis HOM05D004490 ORTHO05D005353 8.1e-36 155.2 159 54.7
Oeu021013.3 Olea europaea HOM05D004490 ORTHO05D005353 1.1e-35 154.8 157 55.4
Nn5g27710 Nelumbo nucifera HOM05D004490 ORTHO05D005353 1.8e-35 154.1 146 59.6
CANSAT64G2929 Cannabis sativa HOM05D004490 ORTHO05D005353 2.4e-35 153.7 163 55.2
DCAR_014360 Daucus carota HOM05D004490 ORTHO05D005353 3.1e-35 153.3 157 54.1
AUR62022689 Chenopodium quinoa HOM05D004490 ORTHO05D005353 5.3e-35 152.5 159 54.1
Sabra19G0095100 Salix brachista HOM05D004490 ORTHO05D005353 5.3e-35 152.5 145 57.9
AL2G20400 Arabidopsis lyrata HOM05D004490 ORTHO05D005353 9.0e-35 151.8 164 52.4
PSO017G7136 Papaver somniferum HOM05D004490 ORTHO05D005353 1.5e-34 151.0 145 55.9
AT1G65280 Arabidopsis thaliana HOM05D004490 ORTHO05D005353 2.0e-34 150.6 164 51.8
PSO063G0599 Papaver somniferum HOM05D004490 ORTHO05D005353 2.0e-34 150.6 145 56.6
Lj7A289G25 Lonicera japonica HOM05D004490 ORTHO05D005353 3.4e-34 149.8 177 52.5
CSS0027711 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 2.2e-33 147.1 158 55.1
AUR62022497 Chenopodium quinoa HOM05D004490 ORTHO05D005353 8.4e-33 145.2 159 52.8
CSS0045593 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 1.9e-32 144.1 158 54.4
A09p29500 Brassica napus HOM05D004490 ORTHO05D005353 2.4e-32 143.7 167 50.9
BraA09t38516Z Brassica rapa HOM05D004490 ORTHO05D005353 2.4e-32 143.7 167 50.9
Thhalv10028527m.g Eutrema salsugineum HOM05D004490 ORTHO05D005353 3.2e-32 143.3 165 51.5
PGR102G0893 Punica granatum HOM05D004490 ORTHO05D005353 3.2e-32 143.3 150 56.7
Sp6g08010 Schrenkiella parvula HOM05D004490 ORTHO05D005353 3.2e-32 143.3 166 50.6
BcaC04g20957 Brassica carinata HOM05D004490 ORTHO05D005353 9.3e-32 141.7 167 50.3
BNapus_Darmor_BZH_scaffold_278p00040 Brassica napus HOM05D004490 ORTHO05D005353 9.3e-32 141.7 167 50.3
BolC9t56586H Brassica oleracea HOM05D004490 ORTHO05D005353 9.3e-32 141.7 167 50.3
AUR62004649 Chenopodium quinoa HOM05D004490 ORTHO05D005353 1.6e-31 141.0 161 51.6
HPP92_020159 Vanilla planifolia HOM05D004490 ORTHO05D005353 6.0e-31 139.0 145 56.6
CDE08G1471 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 1.8e-30 137.5 156 51.9
RcHm_v2.0_Chr5g0082081 Rosa chinensis HOM05D004490 ORTHO05D005353 3.0e-30 136.7 91 81.3
Aa31LG9G14890 Aethionema arabicum HOM05D004490 ORTHO05D005353 1.9e-29 134.0 149 53.7
Solyc11g018670.3 Solanum lycopersicum HOM05D004490 ORTHO05D005353 3.3e-29 133.3 159 49.7
BcaB01g01408 Brassica carinata HOM05D004490 ORTHO05D005353 5.6e-29 132.5 168 47.6
CDE02G3308 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 7.4e-29 132.1 156 51.3
Os01g0521500 Oryza sativa ssp. japonica HOM05D004490 ORTHO05D005353 6.2e-28 129.0 162 48.1
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 8.1e-28 128.6 136 55.1
ATR1098G081 Amborella trichopoda HOM05D004490 ORTHO05D008312 8.1e-28 128.6 148 52.7
SEGI_05919 Sequoiadendron giganteum HOM05D004490 ORTHO05D005353 1.1e-27 128.3 145 51.7
Peaxi162Scf00848g00115 Petunia axillaris HOM05D004490 ORTHO05D005353 1.4e-27 127.9 158 50.0
Sopen11g009650 Solanum pennellii HOM05D004490 ORTHO05D005353 9.0e-27 125.2 159 48.4
unitig_699.g19825 Utricularia gibba HOM05D004490 ORTHO05D005353 2.6e-26 123.6 156 47.4
Zm00001eb427930 Zea mays HOM05D004490 ORTHO05D005353 4.9e-25 119.4 144 45.8
CBR_g58400 Chara braunii HOM05D004490 ORTHO05D005353 1.9e-24 117.5 159 43.4
Nitab4.5_0000277g0020 Nicotiana tabacum HOM05D004490 ORTHO05D005353 2.4e-24 117.1 157 44.6
Pp3c14_7350 Physcomitrium patens HOM05D004490 ORTHO05D005353 9.3e-24 115.2 158 45.6
Mapoly0003s0077 Marchantia polymorpha HOM05D004490 ORTHO05D005353 4.6e-23 112.8 162 43.2
Prupe.3G081100 Prunus persica HOM05D004490 ORTHO05D005353 1.0e-22 111.7 153 46.4
CAN.G905.35 Capsicum annuum HOM05D004490 ORTHO05D005353 3.0e-22 110.2 158 44.9
vmacro11670 Vaccinium macrocarpon HOM05D004490 ORTHO05D005353 1.5e-21 107.8 156 44.2
CSS0029963 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 1.6e-20 104.4 158 43.0
Rhsim11G0059700 Rhododendron simsii HOM05D004490 ORTHO05D005353 1.6e-20 104.4 165 43.0
AagrBONN_evm.TU.Sc2ySwM_228.3521 Anthoceros agrestis HOM05D004490 ORTHO05D005353 5.3e-19 99.4 152 42.1
SHI09004 Sapria himalayana HOM05D004490 ORTHO05D005353 1.5e-18 97.8 157 41.4
Sopen01g003870 Solanum pennellii HOM05D004490 ORTHO05D005353 5.8e-18 95.9 140 42.1
PGSC0003DMG400016394 Solanum tuberosum HOM05D004490 ORTHO05D002367 1.1e-16 91.7 140 37.9
TAR622G0885 Trochodendron aralioides HOM05D004490 ORTHO05D005353 5.5e-16 89.4 91 61.5
TAR630G0004 Trochodendron aralioides HOM05D004490 ORTHO05D005353 5.5e-16 89.4 91 62.6
FAN11G1351 Fragaria x ananassa HOM05D023187 ORTHO05D207007 1.8e-14 84.3 54 79.6
SHI41020 Sapria himalayana HOM05D004490 ORTHO05D005353 8.7e-14 82.0 95 52.6
SHI54375 Sapria himalayana HOM05D004490 ORTHO05D005353 2.5e-13 80.5 95 51.6
Hma1.2p1_0363F.1_g136650 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 1.2e-10 71.6 62 62.9
PRCOL_00002362 Prasinoderma coloniale HOM05D004490 ORTHO05D005353 5.0e-09 66.2 141 41.1
Gorai.012G182200 Gossypium raimondii HOM05D004490 ORTHO05D005353 9.3e-08 62.0 156 38.5
Actinidia03513 Actinidia chinensis HOM05D004490 ORTHO05D005353 4.6e-07 59.7 69 49.3
FAN25G0239 Fragaria x ananassa HOM05D021869 ORTHO05D029530 5.1e-06 56.2 51 52.9
FAN21G3040 Fragaria x ananassa HOM05D021869 ORTHO05D029530 6.7e-06 55.8 51 52.9


User provided reference genes

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