Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 4.3e-178 627.9 315 100.0
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 3.2e-173 611.7 312 98.4
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.1e-170 603.2 312 97.8
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 1.2e-159 566.6 312 91.0
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 7.2e-125 451.1 309 73.5
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 3.0e-123 445.7 310 72.9
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 3.1e-112 409.1 302 68.9
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 2.0e-111 406.4 302 68.9
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 3.5e-111 405.6 302 67.5
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 7.8e-111 404.4 314 65.3
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 7.8e-111 404.4 302 67.2
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 3.8e-110 402.1 301 67.8
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 5.6e-109 398.3 301 65.8
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 4.7e-108 395.2 302 66.6
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 4.7e-108 395.2 309 65.7
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 6.1e-108 394.8 303 66.3
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 6.1e-108 394.8 302 65.9
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 8.0e-108 394.4 314 64.3
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 1.8e-107 393.3 310 64.8
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 2.3e-107 392.9 301 65.1
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 6.8e-107 391.3 308 64.3
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 8.9e-107 391.0 300 66.0
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 2.0e-106 389.8 308 64.3
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 2.0e-106 389.8 303 66.0
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 2.0e-106 389.8 305 64.9
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 2.6e-106 389.4 304 65.1
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 3.4e-106 389.0 310 64.8
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 4.4e-106 388.7 308 64.0
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 4.4e-106 388.7 308 64.0
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 4.4e-106 388.7 308 64.0
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 4.4e-106 388.7 308 64.0
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 4.4e-106 388.7 301 66.1
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 4.4e-106 388.7 302 64.6
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 5.7e-106 388.3 310 62.9
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 1.3e-105 387.1 301 64.5
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 6.4e-105 384.8 302 63.6
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 6.4e-105 384.8 306 64.7
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 7.0e-104 381.3 303 62.7
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 9.2e-104 380.9 300 63.7
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 1.6e-103 380.2 302 63.2
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 2.0e-103 379.8 309 62.5
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 3.5e-103 379.0 311 62.1
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 2.3e-102 376.3 302 63.6
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 5.0e-102 375.2 311 61.7
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 6.6e-102 374.8 300 63.7
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 1.1e-101 374.0 301 62.5
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 1.1e-101 374.0 304 63.2
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.5e-101 373.6 301 63.5
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 3.3e-101 372.5 309 61.5
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 5.6e-101 371.7 311 62.1
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.2e-100 370.5 308 61.0
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 6.2e-100 368.2 303 62.4
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 8.0e-100 367.9 301 62.8
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 8.0e-100 367.9 303 62.4
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 1.1e-99 367.5 303 61.7
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 1.1e-99 367.5 286 65.7
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 2.3e-99 366.3 304 62.2
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 6.8e-99 364.8 301 61.8
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 8.9e-99 364.4 306 60.1
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 1.5e-98 363.6 300 62.0
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 2.0e-98 363.2 302 61.3
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 2.6e-98 362.8 305 62.0
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 7.5e-98 361.3 307 60.9
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 9.8e-98 360.9 297 62.6
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 1.7e-97 360.1 300 59.0
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.9e-96 356.7 306 58.5
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 2.4e-96 356.3 303 61.1
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 5.4e-96 355.1 299 60.5
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 5.4e-96 355.1 306 58.2
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 1.0e-94 350.9 302 59.6
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 1.0e-94 350.9 304 59.2
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 3.9e-94 349.0 299 58.5
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 2.5e-93 346.3 302 60.3
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 2.5e-93 346.3 304 57.9
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 3.3e-93 345.9 303 58.7
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 2.1e-92 343.2 302 57.0
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 3.6e-92 342.4 311 57.9
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 8.1e-92 341.3 321 56.7
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 9.9e-90 334.3 304 58.6
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 2.2e-89 333.2 303 57.4
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 2.1e-87 326.6 356 51.1
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 7.8e-87 324.7 306 57.2
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 8.6e-86 321.2 273 61.9
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 8.6e-86 321.2 304 53.0
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 3.3e-85 319.3 302 55.0
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 3.3e-85 319.3 308 54.9
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 1.6e-84 317.0 264 61.7
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 1.8e-83 313.5 265 58.9
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 8.9e-83 311.2 295 56.3
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 6.4e-81 305.1 329 51.4
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 9.2e-80 301.2 278 55.4
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 5.1e-78 295.4 296 55.1
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 1.5e-77 293.9 296 54.7
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 2.1e-76 290.0 271 55.4
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 6.2e-76 288.5 360 46.7
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 1.5e-69 267.3 303 48.2
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 2.1e-68 263.5 303 49.5
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 2.0e-58 230.3 265 51.3
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 2.0e-50 203.8 367 37.1
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 3.8e-49 199.5 264 44.7
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 1.3e-44 184.5 184 53.8
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 1.1e-43 181.4 133 66.9
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 1.2e-42 177.9 171 55.0
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 8.8e-38 161.8 130 60.8
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 2.5e-37 160.2 182 48.4
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 4.3e-37 159.5 130 60.0
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 1.3e-36 157.9 190 51.1
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 3.7e-36 156.4 130 58.5
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 1.1e-32 144.8 127 61.4
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 7.2e-32 142.1 126 54.8
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 2.3e-22 110.5 209 36.8
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 5.2e-22 109.4 89 59.6
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 7.4e-21 105.5 200 31.5
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 1.7e-20 104.4 89 58.4
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 1.2e-13 81.6 123 39.0
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 7.7e-10 68.9 61 62.3
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 3.2e-08 63.5 102 38.2
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 2.1e-07 60.8 54 57.4


User provided reference genes

Program Settings