Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.6e-230 802.4 395 100.0
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 9.4e-215 750.0 395 94.9
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.6e-214 749.2 395 94.9
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 6.1e-214 747.3 395 94.4
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 8.8e-205 716.8 395 90.4
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 8.9e-189 663.7 394 82.0
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 1.5e-188 662.9 393 82.2
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 5.8e-188 661.0 394 81.7
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 6.6e-176 620.9 391 78.0
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 5.2e-173 611.3 391 77.2
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 8.9e-173 610.5 390 76.7
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 1.3e-171 606.7 392 76.0
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 2.9e-171 605.5 392 75.8
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 1.4e-170 603.2 393 75.6
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 1.9e-170 602.8 416 71.6
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 2.4e-170 602.4 391 75.7
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 3.2e-170 602.1 395 75.9
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 3.5e-169 598.6 394 74.6
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 2.3e-168 595.9 401 73.8
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 6.6e-168 594.3 391 76.5
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 8.7e-168 594.0 391 74.9
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 8.7e-168 594.0 390 76.4
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 1.5e-167 593.2 391 75.7
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 1.9e-167 592.8 392 75.8
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 4.3e-167 591.7 391 75.7
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 7.3e-167 590.9 395 74.4
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 1.2e-164 583.6 393 73.5
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 1.5e-164 583.2 345 80.9
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 2.6e-164 582.4 393 74.3
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 2.6e-164 582.4 391 74.4
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 4.4e-164 581.6 391 73.9
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 1.7e-163 579.7 392 73.5
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 2.2e-163 579.3 383 76.2
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 2.9e-163 578.9 392 72.7
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 2.4e-162 575.9 391 73.7
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 2.4e-162 575.9 393 72.3
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 3.2e-162 575.5 394 73.1
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 5.4e-162 574.7 391 72.4
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 1.6e-161 573.2 387 72.9
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 4.6e-161 571.6 392 72.4
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 4.6e-161 571.6 392 73.2
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 1.0e-160 570.5 394 72.3
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 1.7e-160 569.7 393 73.0
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 8.7e-160 567.4 391 71.6
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 1.1e-159 567.0 395 70.9
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 4.3e-159 565.1 396 70.7
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 5.6e-159 564.7 395 71.6
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 2.8e-158 562.4 319 82.1
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 4.8e-158 561.6 321 82.9
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 6.2e-158 561.2 391 72.1
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 8.1e-158 560.8 396 70.2
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 1.1e-157 560.5 391 72.4
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 2.4e-157 559.3 395 70.9
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 9.0e-157 557.4 391 71.6
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 2.6e-156 555.8 392 70.2
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 5.8e-156 554.7 391 69.8
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 5.8e-156 554.7 394 70.1
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 5.8e-156 554.7 395 68.9
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 9.9e-156 553.9 394 69.3
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 9.9e-156 553.9 410 69.5
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 3.8e-155 552.0 399 68.9
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 3.8e-155 552.0 368 75.0
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 4.9e-155 551.6 396 68.4
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 4.9e-155 551.6 397 69.8
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 4.9e-155 551.6 392 72.4
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 1.4e-154 550.1 395 67.8
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 4.2e-154 548.5 392 67.9
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 7.1e-154 547.7 395 67.6
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 9.3e-154 547.4 396 68.2
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 1.2e-153 547.0 398 69.1
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 1.2e-153 547.0 398 69.3
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 1.2e-153 547.0 398 69.1
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 1.6e-153 546.6 397 68.5
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 3.5e-153 545.4 396 68.4
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 3.5e-153 545.4 394 69.3
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 4.6e-153 545.0 397 69.3
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 4.6e-153 545.0 397 68.5
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 6.0e-153 544.7 337 77.2
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 1.0e-152 543.9 336 76.8
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 1.0e-152 543.9 393 68.4
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 1.0e-152 543.9 398 69.1
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 1.0e-152 543.9 398 69.1
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 1.3e-152 543.5 324 79.0
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 1.3e-152 543.5 364 73.4
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 1.8e-152 543.1 307 82.4
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 5.1e-152 541.6 328 76.8
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 6.7e-152 541.2 360 75.6
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 1.9e-151 539.7 398 69.1
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 5.6e-151 538.1 394 67.3
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 9.6e-151 537.3 337 74.2
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 4.8e-150 535.0 321 76.9
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 8.1e-150 534.3 394 68.8
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 8.1e-150 534.3 394 67.0
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 6.9e-149 531.2 347 70.6
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 2.6e-148 529.3 395 66.8
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 5.8e-148 528.1 318 78.0
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 1.3e-147 526.9 318 77.4
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 9.3e-146 520.8 325 74.5
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 9.3e-146 520.8 320 75.3
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 2.7e-145 519.2 367 68.4
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 2.7e-145 519.2 397 65.2
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 2.7e-145 519.2 325 74.5
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 7.9e-145 517.7 325 74.2
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 2.3e-144 516.2 324 74.1
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 2.3e-144 516.2 392 67.1
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 6.7e-144 514.6 391 66.5
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 1.6e-142 510.0 362 72.4
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 2.8e-142 509.2 327 73.4
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 3.1e-141 505.8 327 72.5
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 4.0e-141 505.4 400 63.8
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 5.3e-141 505.0 321 72.6
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 5.3e-141 505.0 330 72.4
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 5.8e-140 501.5 322 72.4
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 1.3e-139 500.4 320 73.1
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 1.9e-138 496.5 391 64.2
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 2.5e-138 496.1 367 68.9
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 1.2e-137 493.8 304 73.7
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 4.6e-137 491.9 362 71.3
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 1.1e-135 487.3 307 72.3
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 3.3e-135 485.7 320 71.6
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 1.4e-133 480.3 328 69.5
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 8.5e-131 471.1 318 69.5
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 7.2e-130 468.0 338 69.5
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 9.4e-130 467.6 362 67.1
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.6e-129 466.8 337 69.4
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 1.1e-125 454.1 298 69.8
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 1.8e-125 453.4 340 71.2
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 1.7e-123 446.8 397 59.4
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 1.7e-123 446.8 293 72.4
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 3.8e-123 445.7 257 79.4
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 4.2e-122 442.2 241 86.3
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 3.0e-120 436.0 318 62.3
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 2.8e-118 429.5 354 64.1
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 4.8e-118 428.7 302 62.6
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 5.0e-115 418.7 302 64.6
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 5.7e-111 405.2 259 77.2
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 2.2e-110 403.3 200 97.5
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 7.0e-109 398.3 326 57.4
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 9.1e-109 397.9 334 56.6
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 5.5e-106 388.7 233 76.8
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 4.7e-105 385.6 299 60.9
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.4e-104 384.0 249 75.1
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 2.9e-99 366.3 199 85.9
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 6.5e-99 365.2 222 84.2
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 1.9e-98 363.6 400 51.0
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 2.2e-94 350.1 248 73.4
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 2.8e-94 349.7 233 72.1
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 5.5e-90 335.5 216 76.4
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 6.2e-73 278.9 358 44.4
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 8.0e-73 278.5 343 46.1
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 8.3e-70 268.5 323 44.6
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 7.0e-69 265.4 219 62.6
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 1.5e-66 257.7 296 47.0
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 4.7e-65 252.7 311 44.1
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 4.9e-62 242.7 195 66.7
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 7.1e-53 212.2 120 80.8
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 1.6e-52 211.1 153 71.2
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 1.6e-41 174.5 283 39.2
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 3.2e-37 160.2 94 83.0
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 7.1e-37 159.1 94 81.9
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 7.1e-37 159.1 158 57.0
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 9.3e-37 158.7 158 57.0
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 7.9e-36 155.6 94 79.8
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 2.3e-35 154.1 131 62.6
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 3.0e-35 153.7 94 79.8
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 1.5e-31 141.4 98 75.5
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 9.3e-29 132.1 76 75.0
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 2.1e-28 131.0 340 29.4
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 1.5e-26 124.8 66 86.4
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 8.2e-25 119.0 74 71.6
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 4.0e-24 116.7 160 45.0
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 1.2e-23 115.2 94 66.0
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 2.9e-22 110.5 116 52.6
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.4e-21 108.2 63 76.2
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 1.0e-19 102.1 113 50.4
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 5.7e-18 96.3 61 70.5
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 3.1e-16 90.5 252 31.7
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 2.0e-15 87.8 51 80.4
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 6.1e-12 76.3 47 74.5
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 1.4e-11 75.1 42 81.0
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 6.3e-09 66.2 45 66.7
Hma1.2p1_1039F.1_g250810 Hydrangea macrophylla HOM05D001854 ORTHO05D001800 1.2e-07 62.0 39 71.8
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 1.5e-07 61.6 36 80.6
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 2.0e-07 61.2 39 71.8
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 2.0e-07 61.2 39 71.8


User provided reference genes

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