Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 7.7e-107 390.6 209 100.0
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 7.7e-107 390.6 209 100.0
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 4.4e-102 374.8 219 93.2
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.3e-101 373.2 219 93.2
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.2e-101 372.5 219 92.7
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 4.7e-96 354.8 209 92.8
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 2.3e-87 325.9 215 82.3
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 2.7e-51 206.1 215 56.7
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 3.5e-51 205.7 226 56.2
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 8.1e-48 194.5 217 59.9
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 5.8e-46 188.3 211 59.7
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 1.2e-43 180.6 215 56.3
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.1e-43 179.9 212 53.8
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 8.7e-42 174.5 215 53.0
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 1.5e-41 173.7 206 54.4
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 1.9e-41 173.3 211 54.0
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 3.3e-41 172.6 214 54.2
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 4.3e-41 172.2 209 54.1
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 9.6e-41 171.0 209 51.7
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 1.6e-40 170.2 217 53.0
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 3.6e-40 169.1 213 51.2
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 4.8e-40 168.7 207 53.6
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 3.1e-39 166.0 211 51.2
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 3.1e-39 166.0 224 49.6
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 4.0e-39 165.6 223 49.3
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 9.0e-39 164.5 206 52.9
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 2.0e-38 163.3 211 50.2
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 2.6e-38 162.9 211 49.8
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 1.3e-37 160.6 215 48.8
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 2.9e-37 159.5 224 51.3
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 1.9e-36 156.8 214 48.1
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 9.3e-36 154.5 213 50.2
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 7.8e-35 151.4 199 49.2
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 1.0e-34 151.0 214 48.1
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 3.0e-34 149.4 222 49.1
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 4.3e-33 145.6 224 47.8
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 1.3e-32 144.1 209 45.0
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.6e-32 143.7 218 45.4
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 2.4e-31 139.8 204 47.1
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 4.0e-31 139.0 197 46.7
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 5.3e-31 138.7 211 45.5
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 6.9e-31 138.3 216 46.3
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 9.0e-31 137.9 214 43.9
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 2.0e-30 136.7 198 49.0
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 3.4e-30 136.0 211 45.0
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 4.5e-30 135.6 207 49.8
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 7.6e-30 134.8 227 45.8
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 2.2e-29 133.3 209 43.5
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 4.9e-29 132.1 204 44.6
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 8.4e-29 131.3 215 44.2
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 1.1e-28 131.0 199 42.7
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 1.4e-28 130.6 202 44.6
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 4.2e-28 129.0 215 42.8
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.1e-27 126.7 216 40.3
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 3.5e-27 125.9 200 44.0
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 4.6e-27 125.6 210 41.9
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 6.0e-27 125.2 197 45.2
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 1.3e-26 124.0 222 43.7
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 2.3e-26 123.2 198 41.4
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 3.0e-26 122.9 209 42.1
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 3.0e-26 122.9 201 44.8
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.5e-25 120.6 197 41.6
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 1.9e-25 120.2 233 37.3
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 2.5e-25 119.8 194 45.9
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.5e-25 119.8 200 44.0
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 5.6e-25 118.6 202 44.6
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 1.6e-24 117.1 210 40.5
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.6e-24 117.1 196 40.8
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 3.7e-24 115.9 211 43.1
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 3.7e-24 115.9 227 42.3
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.1e-23 114.4 199 42.2
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 6.9e-23 111.7 181 43.6
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.7e-21 107.1 96 60.4
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 1.7e-21 107.1 244 37.3
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 3.8e-21 105.9 192 42.7
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 4.9e-21 105.5 201 42.8
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 4.9e-21 105.5 223 39.0
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 6.5e-21 105.1 209 39.7
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.9e-20 103.6 210 38.6
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 3.2e-20 102.8 150 49.3
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 1.2e-19 100.9 204 39.7
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 1.6e-19 100.5 206 37.4
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 4.6e-19 99.0 192 41.1
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 1.3e-18 97.4 197 41.1
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 3.0e-18 96.3 145 48.3
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 1.5e-17 94.0 158 38.0
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 4.3e-17 92.4 196 36.7
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 1.3e-16 90.9 214 35.5
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.8e-15 87.0 164 39.6
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 5.3e-15 85.5 149 40.3
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 6.5e-13 78.6 209 32.5
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 8.4e-13 78.2 161 42.9
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.9e-12 77.0 198 36.9
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.2e-11 74.3 181 32.6
Glyma.02G293000 Glycine max HOM05D007542 ORTHO05D009519 3.1e-07 59.7 119 42.0
SEGI_03822 Sequoiadendron giganteum HOM05D007542 ORTHO05D009519 2.6e-06 56.6 46 58.7


User provided reference genes

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