Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 3.8e-93 344.7 166 100.0
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 4.7e-91 337.8 166 97.6
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 3.0e-90 335.1 167 97.0
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 3.4e-81 305.1 166 89.2
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 3.7e-72 275.0 171 77.8
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 2.4e-71 272.3 171 78.4
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 9.2e-71 270.4 171 76.0
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 7.8e-62 240.7 161 64.6
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 1.8e-58 229.6 170 63.5
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 2.4e-58 229.2 161 64.0
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.0e-57 226.1 156 66.0
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 3.8e-56 221.9 162 63.0
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 4.9e-56 221.5 160 64.4
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 8.4e-56 220.7 159 61.6
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.1e-55 220.3 162 63.0
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 3.2e-55 218.8 160 63.8
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 4.2e-55 218.4 141 70.2
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 5.4e-55 218.0 160 65.0
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 1.2e-54 216.9 141 69.5
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 1.6e-54 216.5 171 61.4
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 3.5e-54 215.3 160 61.9
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 6.0e-54 214.5 164 61.6
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 6.0e-54 214.5 161 61.5
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 1.0e-53 213.8 155 64.5
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 2.3e-53 212.6 160 61.2
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 3.0e-53 212.2 155 63.9
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 3.0e-53 212.2 155 64.5
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 3.9e-53 211.8 160 61.2
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 3.3e-52 208.8 145 62.8
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 4.3e-52 208.4 143 67.1
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 7.3e-52 207.6 144 65.3
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 9.6e-52 207.2 161 59.0
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 1.3e-51 206.8 139 66.2
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 1.3e-51 206.8 146 65.1
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 1.1e-50 203.8 142 66.9
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 1.8e-50 203.0 150 63.3
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 2.4e-50 202.6 161 60.2
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 1.5e-49 199.9 146 61.6
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 2.6e-49 199.1 161 57.8
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 5.8e-49 198.0 149 61.7
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 5.8e-49 198.0 166 58.4
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 1.7e-48 196.4 128 68.0
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 4.9e-48 194.9 160 55.6
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 8.4e-48 194.1 156 62.2
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 1.1e-47 193.7 164 54.9
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 1.4e-47 193.4 144 59.7
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 1.4e-47 193.4 151 58.3
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 1.9e-47 193.0 155 60.0
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 5.4e-47 191.4 145 60.0
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 7.1e-47 191.0 155 59.4
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 9.3e-47 190.7 136 63.2
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 2.7e-46 189.1 156 57.1
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 3.5e-46 188.7 158 55.7
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 3.5e-46 188.7 156 56.4
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 3.5e-46 188.7 156 57.1
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 6.0e-46 188.0 154 57.1
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 1.7e-45 186.4 156 53.8
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 1.7e-45 186.4 156 54.5
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 1.7e-45 186.4 156 54.5
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 2.3e-45 186.0 156 54.5
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 2.3e-45 186.0 156 54.5
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 3.0e-45 185.7 156 53.8
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 3.0e-45 185.7 155 58.7
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 5.1e-45 184.9 156 54.5
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 5.1e-45 184.9 163 56.4
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 5.1e-45 184.9 151 58.3
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 6.6e-45 184.5 156 53.8
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 2.5e-44 182.6 161 55.9
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 7.3e-44 181.0 156 54.5
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 1.6e-43 179.9 158 52.5
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 2.1e-43 179.5 140 56.4
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.1e-43 179.5 137 59.9
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.1e-43 179.5 137 59.9
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 8.1e-43 177.6 162 53.7
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 1.1e-42 177.2 150 56.7
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 2.6e-41 172.6 161 53.4
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 2.6e-41 172.6 158 53.2
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 3.4e-41 172.2 155 52.3
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 3.4e-41 172.2 155 52.3
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 5.8e-41 171.4 114 68.4
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 5.8e-41 171.4 162 52.5
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 1.3e-40 170.2 154 51.9
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 4.9e-40 168.3 152 53.9
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 6.4e-40 167.9 157 52.2
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 1.1e-39 167.2 147 52.4
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.9e-39 166.4 138 56.5
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 3.2e-39 165.6 154 51.3
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 3.5e-38 162.2 138 55.1
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 1.8e-37 159.8 165 50.9
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 1.8e-37 159.8 161 47.8
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 1.8e-37 159.8 161 47.8
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 2.3e-37 159.5 127 53.5
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 2.3e-37 159.5 159 47.2
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 9.6e-36 154.1 120 60.0
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 2.8e-35 152.5 146 52.7
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 4.8e-35 151.8 110 61.8
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 1.5e-33 146.7 162 45.1
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 1.9e-31 139.8 116 54.3
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 2.5e-31 139.4 93 67.7
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 8.7e-29 131.0 155 46.5
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 5.7e-28 128.3 139 46.0
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 1.1e-26 124.0 147 40.1
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 6.9e-26 121.3 141 45.4
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 3.8e-24 115.5 200 33.5
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 2.5e-23 112.8 85 62.4
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 3.2e-23 112.5 128 39.8
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 4.2e-23 112.1 158 38.0
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.6e-22 110.2 80 62.5
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 8.2e-19 97.8 75 54.7
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 4.5e-17 92.0 157 36.9
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 7.2e-15 84.7 137 35.0
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 1.2e-14 84.0 104 39.4
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 3.9e-13 79.0 83 48.2
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 6.7e-13 78.2 67 52.2
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.3e-11 73.9 94 45.7
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 2.4e-10 69.7 111 38.7
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 1.9e-07 60.1 125 29.6
MBI18_g36125_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 9.4e-07 57.8 59 42.4
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.6e-06 57.0 46 58.7
Cfa003473 Carpinus fangiana HOM05D006750 ORTHO05D008426 4.7e-06 55.5 32 71.9


User provided reference genes

Program Settings