Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G1632 Fragaria x ananassa HOM05D000003 ORTHO05D000022 4.2e-92 341.3 164 100.0
FvH4_6g42141 Fragaria vesca HOM05D000003 ORTHO05D000022 3.2e-39 165.6 107 78.5
FvH4_6g19462 Fragaria vesca HOM05D000003 ORTHO05D000022 3.5e-38 162.2 111 76.6
FvH4_5g32912 Fragaria vesca HOM05D000003 ORTHO05D000022 8.6e-37 157.5 173 50.3
FvH4_3g05211 Fragaria vesca HOM05D000003 ORTHO05D000022 7.3e-28 127.9 111 57.7
FvH4_5g15581 Fragaria vesca HOM05D000003 ORTHO05D000022 4.7e-27 125.2 229 35.4
FAN16G2078 Fragaria x ananassa HOM05D005119 ORTHO05D006338 2.4e-23 112.8 198 38.4
FvH4_2g12641 Fragaria vesca HOM05D000003 ORTHO05D000022 2.7e-22 109.4 111 56.8
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 2.5e-20 102.8 233 30.9
FvH4_6g42230 Fragaria vesca HOM05D000003 ORTHO05D000022 3.6e-19 99.0 111 45.9
FvH4_5g23942 Fragaria vesca HOM05D002480 ORTHO05D003145 4.7e-19 98.6 178 33.1
FvH4_3g28252 Fragaria vesca HOM05D000003 ORTHO05D000022 1.4e-18 97.1 97 48.5
FvH4_5g21911 Fragaria vesca HOM05D000003 ORTHO05D000022 4.4e-17 92.0 87 57.5
FAN05G0269 Fragaria x ananassa HOM05D000003 ORTHO05D000022 2.9e-16 89.4 82 53.7
FvH4_4g03801 Fragaria vesca HOM05D000003 ORTHO05D000022 5.4e-15 85.1 101 44.6
FvH4_6g16961 Fragaria vesca HOM05D000003 ORTHO05D000022 9.2e-15 84.3 117 38.5
RcHm_v2.0_Chr4g0404581 Rosa chinensis HOM05D000003 ORTHO05D000022 2.1e-14 83.2 122 42.6
FvH4_5g30301 Fragaria vesca HOM05D000003 ORTHO05D000022 6.0e-14 81.6 106 44.3
FvH4_4g27942 Fragaria vesca HOM05D000003 ORTHO05D000022 1.3e-13 80.5 116 37.1
RcHm_v2.0_Chr4g0422501 Rosa chinensis HOM05D000003 ORTHO05D000022 3.9e-13 79.0 108 41.7
FvH4_6g25081 Fragaria vesca HOM05D000003 ORTHO05D000022 8.7e-13 77.8 84 45.2
FvH4_2g21141 Fragaria vesca HOM05D000003 ORTHO05D000022 4.3e-12 75.5 105 45.7
RcHm_v2.0_Chr1g0356971 Rosa chinensis HOM05D000003 ORTHO05D000022 5.6e-12 75.1 98 46.9
FAN24G0533 Fragaria x ananassa HOM05D000003 ORTHO05D011994 7.3e-12 74.7 166 31.3
RcHm_v2.0_Chr3g0495871 Rosa chinensis HOM05D000003 ORTHO05D000022 7.3e-12 74.7 90 50.0
RcHm_v2.0_Chr4g0393821 Rosa chinensis HOM05D000003 ORTHO05D000022 9.6e-12 74.3 98 44.9
FAN08G0911 Fragaria x ananassa HOM05D025101 ORTHO05D000022 2.1e-11 73.2 69 53.6
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 2.1e-11 73.2 100 43.0
FAN11G2561 Fragaria x ananassa HOM05D011676 ORTHO05D011994 6.2e-11 71.6 152 31.6
FvH4_5g36251 Fragaria vesca HOM05D000003 ORTHO05D000022 1.4e-10 70.5 71 46.5
FAN16G3379 Fragaria x ananassa HOM05D000003 ORTHO05D000022 2.4e-10 69.7 71 56.3
FvH4_6g21761 Fragaria vesca HOM05D062033 ORTHO05D045489 9.0e-10 67.8 65 56.9
Prupe.1G162400 Prunus persica HOM05D000003 ORTHO05D000022 7.6e-09 64.7 108 38.0
FvH4_5g15582 Fragaria vesca HOM05D000003 ORTHO05D000022 9.9e-09 64.3 67 55.2
FAN16G3737 Fragaria x ananassa HOM05D004364 ORTHO05D006299 1.7e-08 63.5 61 57.4
TWI81G0012 Tripterygium wilfordii HOM05D000155 ORTHO05D000022 2.2e-08 63.2 97 35.1
FvH4_1g28481 Fragaria vesca HOM05D000003 ORTHO05D011994 2.9e-08 62.8 86 44.2
QL09p012355 Quercus lobata HOM05D000003 ORTHO05D000167 3.8e-08 62.4 163 27.0
FvH4_5g35851 Fragaria vesca HOM05D000003 ORTHO05D000022 4.9e-08 62.0 99 37.4
FvH4_3g33131 Fragaria vesca HOM05D000003 ORTHO05D000022 6.4e-08 61.6 98 40.8
FvH4_2g11631 Fragaria vesca HOM05D013105 ORTHO05D000022 8.4e-08 61.2 57 50.9
FvH4_6g18903 Fragaria vesca HOM05D000003 ORTHO05D000022 8.4e-08 61.2 109 36.7
FvH4_4g17203 Fragaria vesca HOM05D000003 ORTHO05D000022 1.1e-07 60.8 77 46.8
FvH4_5g19160 Fragaria vesca HOM05D000003 ORTHO05D025552 1.9e-07 60.1 71 42.3
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 3.2e-07 59.3 111 36.0
FvH4_6g34981 Fragaria vesca HOM05D000003 ORTHO05D000022 4.2e-07 58.9 69 46.4
Lj4g0016137 Lotus japonicus HOM05D000003 ORTHO05D000004 5.4e-07 58.5 201 22.9
COL.COLO4_18924 Corchorus olitorius HOM05D000003 ORTHO05D009449 9.3e-07 57.8 103 31.1
FvH4_2g00771 Fragaria vesca HOM05D000003 ORTHO05D000022 9.3e-07 57.8 98 37.8
FAN20G0282 Fragaria x ananassa HOM05D000003 ORTHO05D000022 1.2e-06 57.4 84 41.7
FvH4_6g46881 Fragaria vesca HOM05D000003 ORTHO05D000022 1.6e-06 57.0 168 26.8
Prupe.1G509200 Prunus persica HOM05D000003 ORTHO05D000022 1.6e-06 57.0 104 35.6
FvH4_1g18562 Fragaria vesca HOM05D000003 ORTHO05D000022 2.1e-06 56.6 59 45.8
Hund22573 Selenicereus undatus HOM05D000003 ORTHO05D000022 2.1e-06 56.6 98 36.7
FAN14G2715 Fragaria x ananassa HOM05D011676 ORTHO05D011994 2.7e-06 56.2 48 50.0
PSO541G0013 Papaver somniferum HOM05D000003 ORTHO05D000004 2.7e-06 56.2 161 24.2
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 2.7e-06 56.2 173 26.0
FvH4_7g00271 Fragaria vesca HOM05D000003 ORTHO05D000022 4.6e-06 55.5 45 60.0
FAN05G5215 Fragaria x ananassa HOM05D000087 ORTHO05D001941 4.6e-06 55.5 67 43.3
FAN08G0930 Fragaria x ananassa HOM05D000003 ORTHO05D000022 4.6e-06 55.5 73 42.5
Atru.chr10.676 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-06 55.1 91 35.2
Prupe.1G168800 Prunus persica HOM05D000003 ORTHO05D000022 6.0e-06 55.1 77 41.6
Prupe.4G245300 Prunus persica HOM05D000155 ORTHO05D000022 6.0e-06 55.1 98 37.8
QL06p037858 Quercus lobata HOM05D000003 ORTHO05D011877 6.0e-06 55.1 155 24.5
FvH4_6g18361 Fragaria vesca HOM05D000003 ORTHO05D000022 7.8e-06 54.7 94 39.4
RcHm_v2.0_Chr4g0404571 Rosa chinensis HOM05D000003 ORTHO05D000004 7.8e-06 54.7 47 46.8


User provided reference genes

Program Settings