Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 5.8e-68 260.8 131 100.0
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 2.8e-54 215.3 113 97.3
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 8.1e-54 213.8 113 96.5
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 4.1e-50 201.4 138 79.7
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 1.9e-47 192.6 112 88.4
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 2.4e-42 175.6 111 78.4
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 3.2e-42 175.3 111 78.4
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 3.2e-42 175.3 111 76.6
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 5.6e-39 164.5 111 71.2
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 1.3e-38 163.3 113 69.9
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 3.6e-38 161.8 111 73.0
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 6.2e-38 161.0 113 69.9
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 1.4e-37 159.8 109 73.4
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 2.4e-37 159.1 109 72.5
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 3.1e-37 158.7 109 72.5
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 3.1e-37 158.7 113 68.1
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 3.1e-37 158.7 113 68.1
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 5.3e-37 157.9 111 68.5
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 5.3e-37 157.9 111 67.6
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 9.0e-37 157.1 111 67.6
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 9.0e-37 157.1 113 66.4
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.2e-36 156.8 113 67.3
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 1.2e-36 156.8 111 68.5
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 1.5e-36 156.4 107 70.1
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 3.4e-36 155.2 109 71.6
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 3.4e-36 155.2 113 69.0
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 4.4e-36 154.8 113 66.4
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 7.6e-36 154.1 113 66.4
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 9.9e-36 153.7 113 65.5
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 9.9e-36 153.7 113 65.5
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 1.3e-35 153.3 115 65.2
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 1.3e-35 153.3 113 69.9
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 2.2e-35 152.5 103 73.8
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 2.2e-35 152.5 113 68.1
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 2.9e-35 152.1 113 68.1
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.9e-35 152.1 113 68.1
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 2.9e-35 152.1 111 65.8
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 2.9e-35 152.1 113 68.1
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 4.9e-35 151.4 113 68.1
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 4.9e-35 151.4 113 68.1
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 4.9e-35 151.4 113 63.7
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 4.9e-35 151.4 113 63.7
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 4.9e-35 151.4 109 69.7
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 4.9e-35 151.4 109 69.7
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 6.4e-35 151.0 115 64.3
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 6.4e-35 151.0 110 67.3
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 8.4e-35 150.6 113 65.5
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 8.4e-35 150.6 103 69.9
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 8.4e-35 150.6 110 69.1
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 8.4e-35 150.6 113 68.1
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 1.4e-34 149.8 113 67.3
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 1.4e-34 149.8 111 66.7
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 1.9e-34 149.4 110 66.4
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 1.9e-34 149.4 110 67.3
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 1.9e-34 149.4 113 66.4
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 7.1e-34 147.5 107 65.4
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 7.1e-34 147.5 110 67.3
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 3.5e-33 145.2 113 65.5
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 3.5e-33 145.2 112 64.3
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 1.7e-32 142.9 108 65.7
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 1.7e-32 142.9 107 63.6
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 2.3e-32 142.5 111 64.0
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 2.3e-32 142.5 104 67.3
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 2.3e-32 142.5 107 65.4
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 3.0e-32 142.1 108 63.9
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 3.0e-32 142.1 113 59.3
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 3.9e-32 141.7 104 65.4
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 3.9e-32 141.7 104 67.3
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 5.1e-32 141.4 104 65.4
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 6.6e-32 141.0 108 65.7
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 6.6e-32 141.0 113 60.2
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 6.6e-32 141.0 113 59.3
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 8.7e-32 140.6 108 64.8
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 8.7e-32 140.6 113 60.2
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 1.5e-31 139.8 102 65.7
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 1.5e-31 139.8 102 65.7
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 3.3e-31 138.7 107 62.6
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 4.3e-31 138.3 112 63.4
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 5.6e-31 137.9 107 62.6
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 1.6e-30 136.3 105 61.0
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 2.8e-30 135.6 105 62.9
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 6.2e-30 134.4 104 62.5
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 6.2e-30 134.4 113 59.3
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 6.2e-30 134.4 108 60.2
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 8.1e-30 134.0 104 62.5
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 2.6e-28 129.0 112 58.9
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 7.6e-28 127.5 130 52.3
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 1.4e-26 123.2 105 59.0
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 4.2e-26 121.7 131 50.4
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 2.1e-25 119.4 102 59.8
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 1.1e-23 113.6 101 49.5
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 6.2e-22 107.8 101 47.5
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 7.6e-20 100.9 101 50.5
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 1.9e-18 96.3 94 54.3
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 3.8e-11 72.0 101 33.7
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 2.7e-09 65.9 96 35.4
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 3.7e-06 55.5 76 40.8


User provided reference genes

Program Settings