Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G1408 Fragaria x ananassa HOM05D005342 ORTHO05D006925 2.1e-146 522.3 254 100.0
FAN21G1494 Fragaria x ananassa HOM05D005342 ORTHO05D006925 1.5e-136 489.6 252 95.6
FAN16G1572 Fragaria x ananassa HOM05D005342 ORTHO05D006925 7.1e-131 470.7 252 92.9
FAN11G0369 Fragaria x ananassa HOM05D005342 ORTHO05D006925 8.1e-127 457.2 252 91.3
FvH4_3g12950 Fragaria vesca HOM05D005342 ORTHO05D006925 7.6e-125 450.7 252 88.9
RcHm_v2.0_Chr5g0021061 Rosa chinensis HOM05D005342 ORTHO05D006925 1.9e-123 446.0 252 88.1
MD05G1246900 Malus domestica HOM05D005342 ORTHO05D006925 2.5e-107 392.5 252 77.4
Haze_05265 Corylus avellana HOM05D005342 ORTHO05D006925 2.7e-106 389.0 252 75.4
MD10G1227500 Malus domestica HOM05D005342 ORTHO05D006925 2.7e-106 389.0 252 77.0
Prupe.4G117500 Prunus persica HOM05D005342 ORTHO05D006925 2.7e-106 389.0 252 76.6
CiPaw.09G137700 Carya illinoinensis HOM05D005342 ORTHO05D006925 2.3e-105 386.0 252 75.0
Lj2g0003117 Lotus japonicus HOM05D005342 ORTHO05D006925 1.9e-104 382.9 252 75.4
Lalb_Chr10g0095551 Lupinus albus HOM05D005342 ORTHO05D006925 1.9e-104 382.9 252 74.2
Ca_26328_v3 Cicer arietinum L. HOM05D005342 ORTHO05D006925 5.7e-104 381.3 252 75.4
DCAR_001275 Daucus carota HOM05D005342 ORTHO05D006925 5.7e-104 381.3 252 73.0
GSVIVG01012146001 Vitis vinifera HOM05D005342 ORTHO05D006925 5.7e-104 381.3 252 74.6
Psat6g050320 Pisum sativum HOM05D005342 ORTHO05D006925 9.7e-104 380.6 252 73.8
Dinv11757 Davidia involucrata HOM05D005342 ORTHO05D006925 2.8e-103 379.0 252 75.0
MELO3C007034.2 Cucumis melo HOM05D005342 ORTHO05D006925 4.8e-103 378.3 252 73.0
CsaV3_6G052760 Cucumis sativus L. HOM05D005342 ORTHO05D006925 4.8e-103 378.3 252 73.0
Potri.001G160800 Populus trichocarpa HOM05D005342 ORTHO05D006925 4.8e-103 378.3 252 74.2
arahy.Tifrunner.gnm1.ann1.EGN9M7 Arachis hypogaea HOM05D005342 ORTHO05D006925 1.4e-102 376.7 252 73.4
TPR.G34568 Trifolium pratense HOM05D005342 ORTHO05D006925 4.1e-102 375.2 252 72.2
Gohir.A01G185820 Gossypium hirsutum HOM05D005342 ORTHO05D006925 5.3e-102 374.8 251 74.1
Sed0018199 Sechium edule HOM05D005342 ORTHO05D006925 6.9e-102 374.4 252 72.2
Gorai.002G218700 Gossypium raimondii HOM05D005342 ORTHO05D006925 9.0e-102 374.0 251 74.1
TWI53G1312 Tripterygium wilfordii HOM05D005342 ORTHO05D006925 1.5e-101 373.2 252 72.2
Thecc.02G004100 Theobroma cacao HOM05D005342 ORTHO05D006925 2.0e-101 372.9 251 74.9
CANSAT35G0196 Cannabis sativa HOM05D005342 ORTHO05D006925 2.6e-101 372.5 252 74.2
Glyma.07G173800 Glycine max HOM05D005342 ORTHO05D006925 3.4e-101 372.1 251 72.9
Gohir.D01G176400 Gossypium hirsutum HOM05D005342 ORTHO05D006925 3.4e-101 372.1 251 73.7
CSS0011520 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 7.7e-101 370.9 252 73.0
CSS0036835 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 7.7e-101 370.9 252 73.0
Hund19384 Selenicereus undatus HOM05D005342 ORTHO05D006925 7.7e-101 370.9 252 71.4
Lj2A343T76 Lonicera japonica HOM05D005342 ORTHO05D006925 1.0e-100 370.5 247 74.9
Manes.03G075200 Manihot esculenta HOM05D005342 ORTHO05D006925 1.7e-100 369.8 252 70.6
Cfa001127 Carpinus fangiana HOM05D005342 ORTHO05D006925 2.2e-100 369.4 256 71.5
Eucgr.D00013 Eucalyptus grandis HOM05D005342 ORTHO05D006925 2.2e-100 369.4 252 72.2
Medtr6g024095 Medicago truncatula HOM05D005342 ORTHO05D006925 2.2e-100 369.4 252 72.2
vmacro21284 Vaccinium macrocarpon HOM05D005342 ORTHO05D006925 2.2e-100 369.4 248 74.2
Medtr5g020440 Medicago truncatula HOM05D005342 ORTHO05D006925 2.9e-100 369.0 252 72.2
HanXRQChr05g0148741 Helianthus annuus HOM05D005342 ORTHO05D006925 8.5e-100 367.5 252 71.4
Atru.chr10.349 Acer truncatum HOM05D005342 ORTHO05D006925 1.9e-99 366.3 252 72.2
ECA246G2798 Erigeron canadensis HOM05D005342 ORTHO05D006925 2.5e-99 365.9 252 72.2
Phvul.003G015000 Phaseolus vulgaris HOM05D005342 ORTHO05D006925 2.5e-99 365.9 251 70.9
Rhsim03G0048000 Rhododendron simsii HOM05D005342 ORTHO05D006925 4.2e-99 365.2 240 77.9
Atru.chr10.317 Acer truncatum HOM05D005342 ORTHO05D006925 5.5e-99 364.8 252 71.8
Nitab4.5_0013176g0020 Nicotiana tabacum HOM05D005342 ORTHO05D006925 7.2e-99 364.4 251 70.1
CAN.G809.68 Capsicum annuum HOM05D005342 ORTHO05D006925 1.2e-98 363.6 251 71.3
Migut.M02010 Erythranthe guttata HOM05D005342 ORTHO05D006925 2.1e-98 362.8 251 70.1
PGR004G0306 Punica granatum HOM05D005342 ORTHO05D006925 7.9e-98 360.9 252 69.4
ClCG01G025520 Citrullus lanatus HOM05D005342 ORTHO05D006925 1.0e-97 360.5 252 70.6
Lsat_1_v5_gn_6_95820 Lactuca sativa HOM05D005342 ORTHO05D006925 1.0e-97 360.5 249 72.3
PGSC0003DMG400017735 Solanum tuberosum HOM05D005342 ORTHO05D006925 1.4e-97 360.1 251 69.3
Medtr1g033240 Medicago truncatula HOM05D005342 ORTHO05D006925 1.8e-97 359.8 252 71.0
Solyc02g081660.3 Solanum lycopersicum HOM05D005342 ORTHO05D006925 1.8e-97 359.8 251 69.3
Sopen02g026270 Solanum pennellii HOM05D005342 ORTHO05D006925 1.8e-97 359.8 251 69.3
Aa31LG9G16230 Aethionema arabicum HOM05D005342 ORTHO05D006925 2.3e-97 359.4 252 69.8
CARHR030500 Cardamine hirsuta HOM05D005342 ORTHO05D006925 3.9e-97 358.6 252 69.8
Ciclev10015344m.g Citrus clementina HOM05D005342 ORTHO05D006925 6.7e-97 357.8 251 70.9
AL1G45370 Arabidopsis lyrata HOM05D005342 ORTHO05D006925 8.8e-97 357.5 252 69.8
SGA_v2.0_scaffold298G47707 Striga asiatica HOM05D005342 ORTHO05D006925 8.8e-97 357.5 248 70.2
MSTRG.16371 Avicennia marina HOM05D005342 ORTHO05D006925 1.5e-96 356.7 252 69.8
AUR62020653 Chenopodium quinoa HOM05D005342 ORTHO05D006925 1.5e-96 356.7 245 71.4
Peaxi162Scf00520g00219 Petunia axillaris HOM05D005342 ORTHO05D006925 1.5e-96 356.7 251 70.1
Sabra01G0131500 Salix brachista HOM05D005342 ORTHO05D006925 3.3e-96 355.5 280 65.0
Carub.0001s2937 Capsella rubella HOM05D005342 ORTHO05D006925 5.7e-96 354.8 252 69.8
AT1G30960 Arabidopsis thaliana HOM05D005342 ORTHO05D006925 7.4e-96 354.4 252 70.2
Dinv36886 Davidia involucrata HOM05D005342 ORTHO05D006925 9.7e-96 354.0 235 74.5
SalBow8G1060 Salvia bowleyana HOM05D005342 ORTHO05D006925 9.7e-96 354.0 252 68.3
Nn2g13664 Nelumbo nucifera HOM05D005342 ORTHO05D006925 4.8e-95 351.7 253 69.6
Os08g0207600 Oryza sativa ssp. japonica HOM05D005342 ORTHO05D006925 4.8e-95 351.7 250 67.6
EL10Ac2g03680 Beta vulgaris HOM05D005342 ORTHO05D006925 1.4e-94 350.1 271 66.1
THA.LOC104814325 Tarenaya hassleriana HOM05D005342 ORTHO05D006925 1.8e-94 349.7 252 69.4
TAR626G0514 Trochodendron aralioides HOM05D005342 ORTHO05D006925 3.1e-94 349.0 251 69.3
A09p35250 Brassica napus HOM05D005342 ORTHO05D006925 1.5e-93 346.7 252 68.3
BraA09t39052Z Brassica rapa HOM05D005342 ORTHO05D006925 1.5e-93 346.7 252 68.3
Thhalv10007654m.g Eutrema salsugineum HOM05D005342 ORTHO05D006925 4.5e-93 345.1 252 67.1
BcaB07g32756 Brassica carinata HOM05D005342 ORTHO05D006925 5.9e-93 344.7 252 67.9
BolC5t31751H Brassica oleracea HOM05D005342 ORTHO05D006925 5.9e-93 344.7 252 67.9
PSO017G0115 Papaver somniferum HOM05D005342 ORTHO05D006925 5.9e-93 344.7 251 66.9
PSO063G2198 Papaver somniferum HOM05D005342 ORTHO05D006925 5.9e-93 344.7 251 66.9
Zm00001eb171110 Zea mays HOM05D005342 ORTHO05D006925 5.9e-93 344.7 250 66.8
HPP92_001898 Vanilla planifolia HOM05D005342 ORTHO05D006925 1.3e-92 343.6 251 66.9
BcaC05g27129 Brassica carinata HOM05D005342 ORTHO05D006925 3.8e-92 342.0 252 67.5
C05p30140 Brassica napus HOM05D005342 ORTHO05D006925 3.8e-92 342.0 252 67.5
A07p09560 Brassica napus HOM05D005342 ORTHO05D006925 5.0e-92 341.7 252 67.1
BraA07t28750Z Brassica rapa HOM05D005342 ORTHO05D006925 5.0e-92 341.7 252 67.1
C07p14720 Brassica napus HOM05D005342 ORTHO05D006925 1.1e-91 340.5 252 66.7
BolC7t41974H Brassica oleracea HOM05D005342 ORTHO05D006925 1.1e-91 340.5 252 66.7
Sp1g26820 Schrenkiella parvula HOM05D005342 ORTHO05D006925 1.1e-91 340.5 252 66.7
SHI17083 Sapria himalayana HOM05D005342 ORTHO05D006925 1.9e-91 339.7 247 64.8
arahy.Tifrunner.gnm1.ann1.T4IDLE Arachis hypogaea HOM05D005342 ORTHO05D006925 5.5e-91 338.2 252 67.1
Aqoxy1G01397 Aquilegia oxysepala HOM05D005342 ORTHO05D006925 4.7e-90 335.1 253 67.2
unitig_749.g13576 Utricularia gibba HOM05D005342 ORTHO05D006925 1.0e-89 334.0 252 64.7
Rhsim03G0048600 Rhododendron simsii HOM05D005342 ORTHO05D006925 1.4e-89 333.6 254 69.3
CDE03G0515 Ceratophyllum demersum HOM05D005342 ORTHO05D006925 1.8e-89 333.2 244 68.0
ATR0763G223 Amborella trichopoda HOM05D005342 ORTHO05D006925 5.1e-89 331.6 253 64.8
QL11p012260 Quercus lobata HOM05D005342 ORTHO05D006925 1.1e-88 330.5 224 71.0
Ah.11g044120 Amaranthus hybridus HOM05D005342 ORTHO05D006925 1.3e-87 327.0 246 65.0
AUR62038720 Chenopodium quinoa HOM05D005342 ORTHO05D006925 2.0e-85 319.7 226 68.1
Rhsim05G0150700 Rhododendron simsii HOM05D005342 ORTHO05D006925 1.0e-84 317.4 260 64.2
AUR62043831 Chenopodium quinoa HOM05D005342 ORTHO05D006925 1.7e-84 316.6 223 68.2
Cpa.g.sc1627.2 Carica papaya HOM05D005342 ORTHO05D006925 3.2e-83 312.4 226 66.8
CDE06G1455 Ceratophyllum demersum HOM05D005342 ORTHO05D006925 1.5e-80 303.5 225 66.2
Duzib132G0347 Durio zibethinus HOM05D005342 ORTHO05D006925 2.2e-79 299.7 251 63.3
vmacro07644 Vaccinium macrocarpon HOM05D005342 ORTHO05D006925 3.5e-69 265.8 232 61.2
Actinidia37827 Actinidia chinensis HOM05D005342 ORTHO05D006925 1.3e-68 263.8 252 57.5
HPP92_001865 Vanilla planifolia HOM05D005342 ORTHO05D006925 7.7e-61 238.0 176 66.5
SGA_v2.0_scaffold175G39327 Striga asiatica HOM05D005342 ORTHO05D006925 5.0e-60 235.3 209 56.0
Sc17g0004080 Simmondsia chinensis HOM05D005342 ORTHO05D006925 1.9e-59 233.4 177 66.7
SMO347G0253 Selaginella moellendorffii HOM05D005342 ORTHO05D006925 2.2e-55 219.9 251 46.6
Mapoly0029s0109 Marchantia polymorpha HOM05D005342 ORTHO05D006925 8.3e-55 218.0 250 43.6
CSS0007057 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 3.6e-50 202.6 180 62.2
Pp3c8_14960 Physcomitrium patens HOM05D005342 ORTHO05D006925 5.2e-49 198.7 250 41.6
AagrBONN_evm.TU.Sc2ySwM_368.2515 Anthoceros agrestis HOM05D005342 ORTHO05D006925 8.9e-49 198.0 250 40.8
Prupe.4G117700 Prunus persica HOM05D005342 ORTHO05D006925 9.8e-48 194.5 181 59.1
Cc09_g05200 Coffea canephora HOM05D005342 ORTHO05D006925 3.7e-47 192.6 128 70.3
Cc09_g05190 Coffea canephora HOM05D005342 ORTHO05D006925 8.3e-47 191.4 114 77.2
Nitab4.5_0006794g0030 Nicotiana tabacum HOM05D005342 ORTHO05D006925 3.2e-38 162.9 102 71.6
CSS0009297 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 2.7e-37 159.8 193 51.3
CBR_g3497 Chara braunii HOM05D005342 ORTHO05D006925 8.1e-34 148.3 215 38.6
BcaB04g18195 Brassica carinata HOM05D005342 ORTHO05D006925 1.1e-25 121.3 106 54.7
MCO16G643 Micromonas commoda HOM05D005342 ORTHO05D006925 1.4e-25 120.9 245 33.1
BraA08t33082Z Brassica rapa HOM05D005342 ORTHO05D006925 1.3e-18 97.8 109 53.2
Oeu016702.1 Olea europaea HOM05D005342 ORTHO05D006925 1.6e-13 80.9 51 70.6
HPP92_001866 Vanilla planifolia HOM05D005342 ORTHO05D006925 4.6e-13 79.3 50 72.0
Atru.chr10.358 Acer truncatum HOM05D002757 ORTHO05D003252 7.9e-13 78.6 47 72.3
SEGI_08357 Sequoiadendron giganteum HOM05D005342 ORTHO05D006925 8.7e-12 75.1 48 68.8
SEGI_07430 Sequoiadendron giganteum HOM05D005342 ORTHO05D006925 1.6e-10 70.9 59 62.7


User provided reference genes

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