Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.1e-243 846.3 446 100.0
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.3e-231 806.2 446 92.8
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 3.4e-229 798.1 447 93.1
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 4.9e-228 794.3 446 91.7
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 3.5e-226 788.1 446 90.6
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 3.2e-195 685.3 450 81.1
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 1.1e-126 457.6 476 60.7
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 1.1e-105 387.9 466 54.7
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 9.4e-86 321.6 475 49.5
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 3.3e-83 313.2 441 49.2
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 4.4e-75 286.2 461 44.7
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 4.1e-73 279.6 442 45.5
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 2.9e-71 273.5 433 44.8
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 1.5e-70 271.2 469 41.2
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.6e-69 267.7 459 42.7
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 2.3e-68 263.8 430 44.0
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 1.8e-65 254.2 435 43.2
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 9.1e-65 251.9 437 42.8
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 4.5e-64 249.6 427 43.1
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 1.7e-63 247.7 407 45.7
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.9e-63 246.9 435 45.3
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 6.5e-63 245.7 437 44.6
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 4.2e-62 243.0 451 41.5
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 2.7e-61 240.4 483 41.2
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 4.7e-61 239.6 458 42.6
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.4e-60 238.0 435 45.5
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 1.8e-60 237.7 474 42.0
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.8e-60 237.7 442 41.6
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 5.2e-60 236.1 460 43.0
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 6.8e-60 235.7 451 39.9
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.2e-59 235.0 437 45.3
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 2.6e-59 233.8 461 42.1
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 7.5e-59 232.3 458 42.4
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 3.8e-55 219.9 448 39.1
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 8.5e-55 218.8 462 39.6
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 2.1e-53 214.2 440 38.6
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 4.0e-52 209.9 452 36.7
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 5.2e-52 209.5 463 39.5
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 4.4e-51 206.5 459 37.5
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 4.9e-50 203.0 470 38.1
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 4.9e-50 203.0 370 40.8
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 9.1e-49 198.7 446 39.0
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 2.0e-48 197.6 461 35.8
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.0e-47 195.3 230 48.3
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.3e-47 194.1 464 37.9
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 8.6e-47 192.2 440 37.0
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 1.5e-46 191.4 397 40.1
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.5e-46 191.4 470 36.8
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 7.2e-46 189.1 435 38.2
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 9.5e-46 188.7 438 35.4
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 2.3e-44 184.1 459 38.6
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 3.4e-43 180.3 438 35.6
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 5.7e-43 179.5 447 36.5
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 5.7e-43 179.5 464 33.8
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 9.8e-43 178.7 476 35.7
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 4.9e-42 176.4 473 34.2
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 4.9e-42 176.4 448 37.3
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 6.3e-42 176.0 330 42.4
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 1.1e-41 175.3 457 33.3
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 1.4e-41 174.9 476 35.5
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 2.0e-40 171.0 472 35.8
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 2.7e-40 170.6 414 38.4
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 4.6e-40 169.9 472 35.4
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 1.0e-39 168.7 452 36.7
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 1.0e-39 168.7 440 36.8
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 1.3e-39 168.3 464 35.8
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 1.3e-39 168.3 453 37.1
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 2.3e-39 167.5 469 34.8
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 6.6e-39 166.0 459 34.6
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 6.6e-39 166.0 433 36.0
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 1.5e-38 164.9 262 42.0
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 1.5e-38 164.9 442 38.5
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 5.6e-38 162.9 456 37.3
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 7.3e-38 162.5 474 35.4
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 3.6e-37 160.2 441 34.5
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 1.8e-36 157.9 433 35.6
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 2.3e-36 157.5 465 35.7
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 2.3e-36 157.5 389 36.5
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 6.8e-36 156.0 422 34.8
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 6.8e-36 156.0 449 35.4
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 2.6e-35 154.1 452 34.5
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 1.3e-34 151.8 456 35.5
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 1.1e-33 148.7 455 34.7
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 2.4e-33 147.5 440 32.7
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 7.0e-33 146.0 448 30.4
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 1.6e-32 144.8 471 34.6
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 1.0e-31 142.1 444 34.5
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.7e-31 141.4 455 31.4
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 8.6e-31 139.0 432 34.5
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 2.5e-30 137.5 452 34.7
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 1.2e-29 135.2 473 32.8
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 2.8e-29 134.0 462 31.0
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 4.7e-29 133.3 432 30.6
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 6.2e-29 132.9 442 32.8
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 1.1e-28 132.1 288 37.2
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.0e-28 130.2 291 38.8
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 4.4e-27 126.7 359 31.8
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.3e-26 125.2 447 31.3
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 2.9e-26 124.0 450 29.8
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 3.7e-26 123.6 449 33.0
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 3.2e-25 120.6 434 30.2
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 7.1e-25 119.4 225 37.8
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 2.1e-24 117.9 325 34.8
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 2.7e-24 117.5 470 31.1
CANSAT35G1552 Cannabis sativa HOM05D006105 ORTHO05D006345 2.3e-23 114.4 447 28.9
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 2.3e-23 114.4 440 30.5
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 5.6e-22 109.8 448 30.6
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 3.6e-21 107.1 225 37.8
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 1.1e-20 105.5 446 27.6
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 2.3e-20 104.4 328 34.1
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 3.1e-20 104.0 440 29.1
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 4.0e-20 103.6 284 35.9
Phvul.011G157100 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 6.8e-20 102.8 427 32.1
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 6.8e-20 102.8 214 35.5
VMungo1127G1756 Vigna mungo HOM05D006105 ORTHO05D006345 6.8e-20 102.8 311 34.4
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 4.4e-19 100.1 420 28.8
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 9.2e-17 92.4 355 33.8
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 9.2e-17 92.4 254 39.0
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.7e-16 90.9 355 33.5
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 3.5e-16 90.5 208 37.5
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.0e-15 89.0 349 32.4
Aqoxy4G00493 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 1.7e-15 88.2 414 31.9
Glyma.06G232800 Glycine max HOM05D006105 ORTHO05D006345 3.0e-15 87.4 529 27.6
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 3.0e-15 87.4 455 29.2
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 3.6e-13 80.5 205 33.7
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 4.7e-13 80.1 428 28.0
ATR0602G093 Amborella trichopoda HOM05D006105 ORTHO05D006345 3.1e-12 77.4 449 26.1
GSVIVG01021165001 Vitis vinifera HOM05D006105 ORTHO05D006345 6.8e-12 76.3 439 28.5
Thecc.06G176400 Theobroma cacao HOM05D013066 ORTHO05D010890 2.6e-11 74.3 468 25.4
Solyc10g007156.2 Solanum lycopersicum HOM05D016660 ORTHO05D006345 3.2e-09 67.4 184 33.2
SEGI_16969 Sequoiadendron giganteum HOM05D016559 ORTHO05D019650 2.1e-08 64.7 316 29.4
HanXRQChr17g0545011 Helianthus annuus HOM05D006105 ORTHO05D006345 3.5e-08 63.9 186 30.6
Migut.H01972 Erythranthe guttata HOM05D006105 ORTHO05D006345 6.0e-08 63.2 185 28.1
Glyma.15G079800 Glycine max HOM05D009670 ORTHO05D010890 5.6e-06 56.6 466 25.5


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