Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G1010 Fragaria x ananassa HOM05D008177 ORTHO05D010128 9.9e-67 256.5 120 100.0
FAN07G1979 Fragaria x ananassa HOM05D029018 ORTHO05D009885 3.9e-31 138.3 74 81.1
FAN28G0217 Fragaria x ananassa HOM05D029018 ORTHO05D009885 1.3e-29 133.3 70 84.3
Atru.chr10.43 Acer truncatum HOM05D001828 ORTHO05D001745 4.5e-27 124.8 71 78.9
Atru.chr9.1 Acer truncatum HOM05D001828 ORTHO05D001745 4.5e-27 124.8 71 78.9
Atru.chr9.218 Acer truncatum HOM05D001828 ORTHO05D001745 4.5e-27 124.8 71 78.9
ScUNg0000970 Simmondsia chinensis HOM05D007167 ORTHO05D009885 4.5e-27 124.8 80 72.5
Atru.chr10.37 Acer truncatum HOM05D001828 ORTHO05D001745 7.7e-27 124.0 70 80.0
EL10As7g23711 Beta vulgaris HOM05D001828 ORTHO05D001745 8.5e-26 120.6 79 70.9
QL04p056327 Quercus lobata HOM05D001828 ORTHO05D009885 9.4e-25 117.1 62 85.5
unitig_676.g29551 Utricularia gibba HOM05D001029 ORTHO05D000917 1.6e-24 116.3 80 71.2
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 4.7e-24 114.8 62 83.9
QL02p029509 Quercus lobata HOM05D001828 ORTHO05D001745 1.8e-23 112.8 62 82.3
FAN08G2289 Fragaria x ananassa HOM05D001828 ORTHO05D009885 6.7e-23 110.9 62 80.6
QL02p004526 Quercus lobata HOM05D001828 ORTHO05D001745 6.7e-23 110.9 61 83.6
EL10Ac2g03013 Beta vulgaris HOM05D001828 ORTHO05D001745 8.8e-23 110.5 80 63.8
QL02p029498 Quercus lobata HOM05D001828 ORTHO05D001745 8.8e-23 110.5 62 80.6
arahy.Tifrunner.gnm1.ann1.V6U7IH Arachis hypogaea HOM05D001828 ORTHO05D001745 4.4e-22 108.2 64 79.7
arahy.Tifrunner.gnm1.ann1.CYZ3KW Arachis hypogaea HOM05D001828 ORTHO05D001745 7.5e-22 107.5 62 80.6
arahy.Tifrunner.gnm1.ann1.HA5ZC6 Arachis hypogaea HOM05D001828 ORTHO05D009885 1.3e-21 106.7 64 78.1
unitig_135.g35493 Utricularia gibba HOM05D001029 ORTHO05D009885 1.3e-21 106.7 71 71.8
CSS0027849 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 1.7e-21 106.3 63 77.8
Sopen00g001870 Solanum pennellii HOM05D003608 ORTHO05D000917 2.2e-21 105.9 71 70.4
CSS0048211 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D009885 1.8e-20 102.8 61 77.0
CSS0047713 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 2.4e-20 102.4 63 74.6
CDE02G0001 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 4.1e-20 101.7 61 73.8
CDE02G2883 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 4.1e-20 101.7 61 73.8
CDE02G3303 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 4.1e-20 101.7 61 73.8
Oeu020383.1 Olea europaea HOM05D000920 ORTHO05D004854 1.2e-19 100.1 63 71.4
arahy.Tifrunner.gnm1.ann1.B2M0SA Arachis hypogaea HOM05D001828 ORTHO05D001745 5.9e-19 97.8 55 83.6
PRCOL_00001071 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 7.2e-17 90.9 119 46.2
PRCOL_00001096 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 7.2e-17 90.9 119 46.2
PRCOL_00001112 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 7.2e-17 90.9 119 46.2
PRCOL_00001183 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 7.2e-17 90.9 119 46.2
PRCOL_00001198 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 7.2e-17 90.9 119 46.2
Psat3g188680 Pisum sativum HOM05D003608 ORTHO05D010128 2.1e-16 89.4 52 76.9
CSS0030230 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 3.6e-16 88.6 56 71.4
PGSC0003DMG400044276 Solanum tuberosum HOM05D001828 ORTHO05D001745 1.4e-15 86.7 52 75.0
unitig_807.g34420 Utricularia gibba HOM05D001029 ORTHO05D009885 5.2e-15 84.7 81 59.3
arahy.Tifrunner.gnm1.ann1.51AWIK Arachis hypogaea HOM05D008177 ORTHO05D010128 3.4e-14 82.0 119 46.2
Oeu006837.1 Olea europaea HOM05D001828 ORTHO05D001745 1.3e-13 80.1 50 70.0
Sc06g0003810 Simmondsia chinensis HOM05D007167 ORTHO05D009885 2.8e-13 79.0 62 56.5
PGSC0003DMG400035737 Solanum tuberosum HOM05D001828 ORTHO05D001745 6.3e-13 77.8 46 76.1
Sc06g0003800 Simmondsia chinensis HOM05D001828 ORTHO05D009885 1.4e-12 76.6 52 69.2
CiPaw.05G156400 Carya illinoinensis HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.02G222401 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.18G143702 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S000327 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S002943 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S003924 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S006867 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S009156 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S010791 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S013407 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S016678 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S019294 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S020929 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S021910 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S022816 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S023016 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S023552 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S023616 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S024116 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S024216 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S024616 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S025452 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S025552 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S025816 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S025852 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S025952 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S027616 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S028252 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S028352 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S030516 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S032116 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S034316 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S035116 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S036116 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S036716 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S037016 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S038716 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S038816 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S039816 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S040016 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S040816 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S041416 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S042616 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S042916 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S043616 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S044516 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S045516 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S046816 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S047316 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S051416 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S052816 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
Manes.S054316 Manihot esculenta HOM05D008177 ORTHO05D010128 2.4e-12 75.9 40 85.0
arahy.Tifrunner.gnm1.ann1.IE4QSS Arachis hypogaea HOM05D008177 ORTHO05D010128 3.1e-12 75.5 39 84.6
Medtr0055s0130 Medicago truncatula HOM05D001828 ORTHO05D001745 3.5e-11 72.0 46 71.7
CSS0047100 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 4.5e-11 71.6 61 59.0
Sopen07g009460 Solanum pennellii HOM05D003608 ORTHO05D010452 5.9e-11 71.2 71 52.1
EL10As19g24180 Beta vulgaris HOM05D000920 ORTHO05D004854 1.7e-10 69.7 48 64.6
CBR_g56704 Chara braunii HOM05D008177 ORTHO05D010128 2.9e-10 68.9 49 67.3
Sc14g0003330 Simmondsia chinensis HOM05D007167 ORTHO05D010128 3.8e-10 68.6 75 50.7
LjContig00371g0019658 Lotus japonicus HOM05D001828 ORTHO05D000917 5.0e-10 68.2 37 81.1
LjContig00372g0002420 Lotus japonicus HOM05D001828 ORTHO05D000917 5.0e-10 68.2 37 81.1
QL93p0381_0031 Quercus lobata HOM05D007855 ORTHO05D003704 5.0e-10 68.2 44 70.5
QL93p0428_0015 Quercus lobata HOM05D001828 ORTHO05D009885 5.0e-10 68.2 44 70.5
CBR_g31937 Chara braunii HOM05D007864 ORTHO05D010128 3.3e-09 65.5 39 74.4
CBR_g59558 Chara braunii HOM05D007864 ORTHO05D010128 4.2e-09 65.1 49 65.3
CBR_g27903 Chara braunii HOM05D008177 ORTHO05D010128 5.5e-09 64.7 38 76.3
CBR_g51285 Chara braunii HOM05D007864 ORTHO05D000004 5.5e-09 64.7 38 76.3
Sc21g0003530 Simmondsia chinensis HOM05D008177 ORTHO05D010128 5.5e-09 64.7 40 75.0
Thhalv10028070m.g Eutrema salsugineum HOM05D001828 ORTHO05D001745 7.2e-09 64.3 42 66.7
Oeu009467.1 Olea europaea HOM05D003608 ORTHO05D009885 9.5e-09 63.9 37 81.1
BcaB04g16893 Brassica carinata HOM05D003608 ORTHO05D000917 1.6e-08 63.2 45 73.3
SHI06373 Sapria himalayana HOM05D000024 ORTHO05D000007 2.1e-08 62.8 35 77.1
Duzib217G0002 Durio zibethinus HOM05D001828 ORTHO05D001745 2.8e-08 62.4 41 65.9
Duzib250G0005 Durio zibethinus HOM05D001828 ORTHO05D001745 2.8e-08 62.4 41 65.9
unitig_135.g35480 Utricularia gibba HOM05D008177 ORTHO05D010128 8.0e-08 60.8 31 83.9
Sopen00g005120 Solanum pennellii HOM05D000691 ORTHO05D000378 1.8e-07 59.7 64 48.4
Sc14g0003600 Simmondsia chinensis HOM05D001828 ORTHO05D001745 3.0e-07 58.9 31 80.6
Medtr5g031940 Medicago truncatula HOM05D001828 ORTHO05D009885 1.5e-06 56.6 42 64.3
CARHR143560 Cardamine hirsuta HOM05D008177 ORTHO05D010128 9.8e-06 53.9 32 75.0


User provided reference genes

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