Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G0848 Fragaria x ananassa HOM05D004381 ORTHO05D005200 1.0e-163 580.1 312 100.0
FAN16G2672 Fragaria x ananassa HOM05D004381 ORTHO05D005200 1.1e-96 357.5 313 71.9
FvH4_3g43050 Fragaria vesca HOM05D004381 ORTHO05D005200 2.4e-96 356.3 313 71.6
FAN11G3745 Fragaria x ananassa HOM05D004381 ORTHO05D005200 2.4e-96 356.3 313 71.6
FAN21G3999 Fragaria x ananassa HOM05D004381 ORTHO05D005200 5.3e-96 355.1 313 71.6
RcHm_v2.0_Chr5g0077111 Rosa chinensis HOM05D004381 ORTHO05D005200 1.6e-95 353.6 315 70.8
Prupe.6G023700 Prunus persica HOM05D004381 ORTHO05D005200 2.7e-92 342.8 313 68.4
Atru.chr3.2598 Acer truncatum HOM05D004381 ORTHO05D005200 2.3e-91 339.7 313 68.1
TAR623G1292 Trochodendron aralioides HOM05D004381 ORTHO05D005200 2.6e-90 336.3 313 65.8
Cfa009743 Carpinus fangiana HOM05D004381 ORTHO05D005200 9.8e-90 334.3 313 67.1
Migut.D00582 Erythranthe guttata HOM05D004381 ORTHO05D005200 9.8e-90 334.3 313 67.7
Lsat_1_v5_gn_6_48200 Lactuca sativa HOM05D004381 ORTHO05D005200 9.8e-90 334.3 313 66.8
Potri.001G018800 Populus trichocarpa HOM05D004381 ORTHO05D005200 2.8e-89 332.8 313 65.2
Phvul.L011443 Phaseolus vulgaris HOM05D004381 ORTHO05D005200 3.7e-89 332.4 313 67.4
CANSAT35G1357 Cannabis sativa HOM05D004381 ORTHO05D005200 6.3e-89 331.6 313 67.1
Ciclev10016213m.g Citrus clementina HOM05D004381 ORTHO05D005200 6.3e-89 331.6 313 66.5
MD11G1029400 Malus domestica HOM05D004381 ORTHO05D005200 1.4e-88 330.5 313 67.7
Aqoxy7G00799 Aquilegia oxysepala HOM05D004381 ORTHO05D005200 3.1e-88 329.3 319 65.8
COL.COLO4_24848 Corchorus olitorius HOM05D004381 ORTHO05D005200 3.1e-88 329.3 313 64.5
Ca_01288_v3 Cicer arietinum L. HOM05D004381 ORTHO05D005200 4.1e-88 328.9 314 66.6
PSO210G6888 Papaver somniferum HOM05D004381 ORTHO05D005200 4.1e-88 328.9 315 65.7
CiPaw.14G121000 Carya illinoinensis HOM05D004381 ORTHO05D005200 5.4e-88 328.6 314 66.6
Manes.06G166500 Manihot esculenta HOM05D004381 ORTHO05D005200 7.0e-88 328.2 313 64.9
Thecc.09G228300 Theobroma cacao HOM05D004381 ORTHO05D005200 7.0e-88 328.2 313 65.2
ECA233G0542 Erigeron canadensis HOM05D004381 ORTHO05D005200 9.1e-88 327.8 313 64.9
Gorai.004G018900 Gossypium raimondii HOM05D004381 ORTHO05D005200 1.6e-87 327.0 313 64.9
TPR.G6819 Trifolium pratense HOM05D004381 ORTHO05D005200 1.6e-87 327.0 314 65.9
MSTRG.21391 Avicennia marina HOM05D004381 ORTHO05D005200 2.0e-87 326.6 319 65.2
CSS0020783 Camellia sinensis var. sinensis HOM05D004381 ORTHO05D005200 2.0e-87 326.6 313 66.1
Rhsim13G0223600 Rhododendron simsii HOM05D004381 ORTHO05D005200 2.0e-87 326.6 313 65.5
Gohir.D08G023600 Gossypium hirsutum HOM05D004381 ORTHO05D005200 2.7e-87 326.2 320 64.1
Gohir.A08G013200 Gossypium hirsutum HOM05D004381 ORTHO05D005200 3.5e-87 325.9 313 64.9
Cc06_g22560 Coffea canephora HOM05D004381 ORTHO05D005200 5.9e-87 325.1 319 63.9
Duzib150G0594 Durio zibethinus HOM05D004381 ORTHO05D005200 7.7e-87 324.7 313 63.9
Potri.003G205100 Populus trichocarpa HOM05D004381 ORTHO05D005200 7.7e-87 324.7 313 64.5
Glyma.13G340900 Glycine max HOM05D004381 ORTHO05D005200 1.3e-86 323.9 314 65.3
HanXRQChr02g0056281 Helianthus annuus HOM05D004381 ORTHO05D005200 2.2e-86 323.2 313 64.2
Hund22064 Selenicereus undatus HOM05D004381 ORTHO05D005200 2.9e-86 322.8 319 63.6
GSVIVG01025302001 Vitis vinifera HOM05D004381 ORTHO05D005200 2.9e-86 322.8 313 63.9
Solyc11g062020.2 Solanum lycopersicum HOM05D004381 ORTHO05D005200 3.8e-86 322.4 313 64.9
Sopen11g023990 Solanum pennellii HOM05D004381 ORTHO05D005200 3.8e-86 322.4 313 64.9
Glyma.15G033500 Glycine max HOM05D004381 ORTHO05D005200 5.0e-86 322.0 313 64.5
VMungo1080G0554 Vigna mungo HOM05D004381 ORTHO05D005200 6.5e-86 321.6 326 62.9
Sp3g18900 Schrenkiella parvula HOM05D004381 ORTHO05D005200 8.5e-86 321.2 319 63.6
CiPaw.13G163200 Carya illinoinensis HOM05D004381 ORTHO05D005200 1.1e-85 320.9 313 63.9
QL01p005255 Quercus lobata HOM05D004381 ORTHO05D005200 1.5e-85 320.5 312 65.4
Medtr2g098150 Medicago truncatula HOM05D004381 ORTHO05D005200 1.9e-85 320.1 313 64.2
Eucgr.J00789 Eucalyptus grandis HOM05D004381 ORTHO05D005200 2.5e-85 319.7 313 64.2
PSO210G5188 Papaver somniferum HOM05D004381 ORTHO05D005200 3.2e-85 319.3 315 64.4
Lalb_Chr22g0352331 Lupinus albus HOM05D004381 ORTHO05D005200 7.2e-85 318.2 314 65.3
Thhalv10021300m.g Eutrema salsugineum HOM05D004381 ORTHO05D005200 1.2e-84 317.4 319 62.1
MBI04_g13625_MAGBIO Magnolia biondii HOM05D004381 ORTHO05D005200 1.2e-84 317.4 231 78.8
A05p27840 Brassica napus HOM05D004381 ORTHO05D005200 1.6e-84 317.0 310 63.2
DCAR_031567 Daucus carota HOM05D004381 ORTHO05D005200 1.6e-84 317.0 313 64.9
THA.LOC104817902 Tarenaya hassleriana HOM05D004381 ORTHO05D005200 2.8e-84 316.2 313 62.6
Lj3g0004330 Lotus japonicus HOM05D004381 ORTHO05D005200 3.6e-84 315.8 314 64.6
AL3G34820 Arabidopsis lyrata HOM05D004381 ORTHO05D005200 6.1e-84 315.1 313 62.0
MSTRG.18417 Avicennia marina HOM05D004381 ORTHO05D005200 6.1e-84 315.1 313 64.5
BraA05t21671Z Brassica rapa HOM05D004381 ORTHO05D005200 6.1e-84 315.1 310 62.9
Ah.06g193660 Amaranthus hybridus HOM05D004381 ORTHO05D005200 1.0e-83 314.3 320 62.2
AT3G20870 Arabidopsis thaliana HOM05D004381 ORTHO05D005200 1.0e-83 314.3 313 62.0
Peaxi162Scf00029g02914 Petunia axillaris HOM05D004381 ORTHO05D005200 6.8e-83 311.6 313 62.9
Migut.O00580 Erythranthe guttata HOM05D004381 ORTHO05D005200 1.2e-82 310.8 312 63.8
Sabra01G0013400 Salix brachista HOM05D004381 ORTHO05D005200 1.5e-82 310.5 357 57.7
CAN.G71.8 Capsicum annuum HOM05D004381 ORTHO05D005200 2.6e-82 309.7 319 62.4
MD03G1024300 Malus domestica HOM05D004381 ORTHO05D005200 3.4e-82 309.3 313 65.5
MELO3C014607.2 Cucumis melo HOM05D004381 ORTHO05D005200 5.7e-82 308.5 314 63.4
Sed0000340 Sechium edule HOM05D004381 ORTHO05D005200 5.7e-82 308.5 313 62.9
SGA_v2.0_scaffold247G44855 Striga asiatica HOM05D004381 ORTHO05D005200 5.7e-82 308.5 313 59.7
CARHR096750 Cardamine hirsuta HOM05D004381 ORTHO05D005200 9.8e-82 307.8 317 61.8
Nn2g15439 Nelumbo nucifera HOM05D004381 ORTHO05D005200 1.3e-81 307.4 314 62.7
Os02g0196000 Oryza sativa ssp. japonica HOM05D004381 ORTHO05D005200 3.7e-81 305.8 313 61.0
Oeu035739.1 Olea europaea HOM05D004381 ORTHO05D005200 1.1e-80 304.3 297 64.3
Aa31LG8G7690 Aethionema arabicum HOM05D004381 ORTHO05D005200 1.8e-80 303.5 319 62.4
C05p43180 Brassica napus HOM05D004381 ORTHO05D005200 2.4e-80 303.1 311 62.1
BolC5t33048H Brassica oleracea HOM05D004381 ORTHO05D005200 2.4e-80 303.1 311 62.1
Duzib168G0673 Durio zibethinus HOM05D004381 ORTHO05D005200 1.2e-79 300.8 230 73.5
TWI60G0262 Tripterygium wilfordii HOM05D004381 ORTHO05D005200 1.6e-79 300.4 313 61.0
Haze_23102 Corylus avellana HOM05D004381 ORTHO05D005200 3.5e-79 299.3 313 59.4
CsaV3_4G024140 Cucumis sativus L. HOM05D004381 ORTHO05D005200 3.5e-79 299.3 230 75.7
Nitab4.5_0000492g0060 Nicotiana tabacum HOM05D004381 ORTHO05D005200 2.5e-77 293.1 297 62.3
SEGI_07837 Sequoiadendron giganteum HOM05D004381 ORTHO05D005200 2.5e-77 293.1 314 60.2
Sabra03G0151600 Salix brachista HOM05D004381 ORTHO05D005200 3.3e-77 292.7 354 54.8
Nitab4.5_0002026g0030 Nicotiana tabacum HOM05D004381 ORTHO05D005200 4.3e-77 292.4 297 62.0
HPP92_020510 Vanilla planifolia HOM05D004381 ORTHO05D005200 4.3e-77 292.4 313 59.7
arahy.Tifrunner.gnm1.ann1.E88S00 Arachis hypogaea HOM05D004381 ORTHO05D005200 1.2e-76 290.8 356 55.6
EL10Ac4g10297 Beta vulgaris HOM05D004381 ORTHO05D005200 4.7e-76 288.9 312 60.9
BcaC05g28200 Brassica carinata HOM05D004381 ORTHO05D005200 1.0e-75 287.7 310 56.1
MSTRG.21390 Avicennia marina HOM05D004381 ORTHO05D005200 1.8e-75 287.0 313 60.4
Nn7g36163 Nelumbo nucifera HOM05D004381 ORTHO05D005200 1.8e-75 287.0 314 60.2
AUR62000098 Chenopodium quinoa HOM05D004381 ORTHO05D005200 3.0e-75 286.2 316 59.8
Lalb_Chr19g0138141 Lupinus albus HOM05D004381 ORTHO05D005200 4.0e-75 285.8 314 59.2
Actinidia16315 Actinidia chinensis HOM05D004381 ORTHO05D005200 5.2e-75 285.4 353 52.1
arahy.Tifrunner.gnm1.ann1.T21L4I Arachis hypogaea HOM05D004381 ORTHO05D005200 8.9e-75 284.6 358 54.2
Carub.0003s2085 Capsella rubella HOM05D004381 ORTHO05D005200 8.9e-75 284.6 313 58.8
Phvul.011G058500 Phaseolus vulgaris HOM05D004381 ORTHO05D005200 1.5e-74 283.9 312 59.6
ATR0605G196 Amborella trichopoda HOM05D004381 ORTHO05D005200 2.6e-74 283.1 298 61.4
CDE10G0019 Ceratophyllum demersum HOM05D004381 ORTHO05D005200 3.4e-74 282.7 228 70.6
vmacro04193 Vaccinium macrocarpon HOM05D004381 ORTHO05D005200 4.9e-73 278.9 230 72.2
ClCG02G023360 Citrullus lanatus HOM05D004381 ORTHO05D005200 6.4e-73 278.5 291 61.9
Psat7g213080 Pisum sativum HOM05D004381 ORTHO05D005200 8.3e-73 278.1 309 57.6
arahy.Tifrunner.gnm1.ann1.BUZ3KN Arachis hypogaea HOM05D004381 ORTHO05D005200 1.2e-71 274.2 309 56.3
Lj3g0009499 Lotus japonicus HOM05D004381 ORTHO05D005200 4.6e-71 272.3 315 58.1
arahy.Tifrunner.gnm1.ann1.LPI13M Arachis hypogaea HOM05D004381 ORTHO05D005200 1.3e-70 270.8 297 62.0
arahy.Tifrunner.gnm1.ann1.N626J4 Arachis hypogaea HOM05D004381 ORTHO05D005200 1.3e-70 270.8 309 56.0
AUR62019272 Chenopodium quinoa HOM05D004381 ORTHO05D005200 2.3e-70 270.0 311 55.0
MBI01_g27615_MAGBIO Magnolia biondii HOM05D004381 ORTHO05D005200 5.0e-70 268.9 389 46.8
Lj1A348T17 Lonicera japonica HOM05D004381 ORTHO05D005200 1.2e-68 264.2 211 74.4
VMungo1127G1882 Vigna mungo HOM05D004381 ORTHO05D005200 2.1e-68 263.5 299 58.5
Medtr4g065640 Medicago truncatula HOM05D004381 ORTHO05D005200 5.2e-67 258.8 307 58.0
Zm00001eb213530 Zea mays HOM05D004381 ORTHO05D005200 3.4e-66 256.1 317 51.4
Zm00001eb205960 Zea mays HOM05D004381 ORTHO05D005200 6.4e-65 251.9 319 54.2
Ca_20572_v3 Cicer arietinum L. HOM05D004381 ORTHO05D005200 5.6e-61 238.8 230 63.9
Ca_30507_v3 Cicer arietinum L. HOM05D004381 ORTHO05D005200 5.6e-61 238.8 230 63.9
SMO347G0569 Selaginella moellendorffii HOM05D004381 ORTHO05D005200 4.7e-60 235.7 312 51.9
Dinv08032 Davidia involucrata HOM05D004381 ORTHO05D005200 1.1e-59 234.6 258 60.9
Mapoly0039s0091 Marchantia polymorpha HOM05D004381 ORTHO05D005200 3.1e-59 233.0 324 48.1
Sc06g0004510 Simmondsia chinensis HOM05D004381 ORTHO05D005200 1.3e-57 227.6 258 58.1
Dinv36273 Davidia involucrata HOM05D004381 ORTHO05D005200 6.4e-57 225.3 138 85.5
HanXRQChr17g0534131 Helianthus annuus HOM05D004381 ORTHO05D005200 2.7e-55 219.9 242 55.4
AagrBONN_evm.TU.Sc2ySwM_362.691 Anthoceros agrestis HOM05D004381 ORTHO05D005200 3.5e-55 219.5 327 50.2
Pp3c16_16530 Physcomitrium patens HOM05D004381 ORTHO05D005200 7.8e-55 218.4 326 48.5
Cpa.g.sc84.75 Carica papaya HOM05D004381 ORTHO05D005200 7.3e-53 211.8 132 83.3
Glyma.11G132500 Glycine max HOM05D004381 ORTHO05D005200 3.1e-51 206.5 311 46.3
Glyma.12G056900 Glycine max HOM05D004381 ORTHO05D005200 5.6e-45 185.7 175 64.0
Psat5g287120 Pisum sativum HOM05D004381 ORTHO05D005200 3.4e-42 176.4 97 92.8
TPR.G35036 Trifolium pratense HOM05D004381 ORTHO05D005200 3.8e-41 172.9 106 83.0
Os08g0100200 Oryza sativa ssp. japonica HOM05D004381 ORTHO05D005200 1.4e-40 171.0 329 39.5
Oeu052046.2 Olea europaea HOM05D004381 ORTHO05D005200 1.2e-39 167.9 90 93.3
Hma1.2p1_0118F.1_g056480 Hydrangea macrophylla HOM05D004381 ORTHO05D005200 3.6e-36 156.4 84 92.9
arahy.Tifrunner.gnm1.ann1.H592TP Arachis hypogaea HOM05D004381 ORTHO05D005200 2.4e-35 153.7 310 41.0
Psat1g173960 Pisum sativum HOM05D004381 ORTHO05D005200 9.9e-34 148.3 133 70.7
TWI34G1572 Tripterygium wilfordii HOM05D004381 ORTHO05D005200 6.4e-33 145.6 95 78.9
Cre03.g189550 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 9.3e-32 141.7 262 40.8
unitig_26.g10132 Utricularia gibba HOM05D004381 ORTHO05D005200 1.3e-28 131.3 80 81.2
Gohir.D11G292000 Gossypium hirsutum HOM05D004381 ORTHO05D005200 2.1e-28 130.6 74 87.8
Gorai.007G316100 Gossypium raimondii HOM05D004381 ORTHO05D005200 2.1e-28 130.6 74 87.8
TPR.G39903 Trifolium pratense HOM05D004381 ORTHO05D005200 1.1e-27 128.3 156 59.0
unitig_26.g10133 Utricularia gibba HOM05D004381 ORTHO05D005200 4.5e-26 122.9 192 43.8
Dinv36275 Davidia involucrata HOM05D004381 ORTHO05D005200 1.0e-22 111.7 140 51.4
arahy.Tifrunner.gnm1.ann1.9W75VL Arachis hypogaea HOM05D004381 ORTHO05D005200 6.2e-20 102.4 125 54.4
Glyma.08G063100 Glycine max HOM05D004381 ORTHO05D005200 3.8e-17 93.2 57 77.2
CBR_g35021 Chara braunii HOM05D004381 ORTHO05D005200 8.4e-17 92.0 139 40.3
CBR_g19660 Chara braunii HOM05D004381 ORTHO05D005200 1.1e-16 91.7 140 44.3
PRCOL_00002167 Prasinoderma coloniale HOM05D004381 ORTHO05D005200 2.5e-16 90.5 139 41.0
CBR_g37790 Chara braunii HOM05D004381 ORTHO05D005200 3.2e-16 90.1 141 44.0
CBR_g37792 Chara braunii HOM05D004381 ORTHO05D005200 1.0e-14 85.1 141 42.6
MBI09_g41969_MAGBIO Magnolia biondii HOM05D004381 ORTHO05D005200 8.7e-14 82.0 46 87.0
MCO07G169 Micromonas commoda HOM05D004381 ORTHO05D005200 8.7e-14 82.0 140 38.6
arahy.Tifrunner.gnm1.ann1.T6H5I3 Arachis hypogaea HOM05D004381 ORTHO05D005200 4.3e-13 79.7 46 87.0
arahy.Tifrunner.gnm1.ann1.XL2GL1 Arachis hypogaea HOM05D004381 ORTHO05D005200 5.7e-13 79.3 96 58.3
Cre01.g066187 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 1.6e-12 77.8 135 37.8
arahy.Tifrunner.gnm1.ann1.0JWP28 Arachis hypogaea HOM05D004381 ORTHO05D005200 1.8e-11 74.3 96 53.1
TPR.G33171 Trifolium pratense HOM05D004381 ORTHO05D005200 9.0e-11 72.0 43 79.1
arahy.Tifrunner.gnm1.ann1.W9WT0A Arachis hypogaea HOM05D000602 ORTHO05D011536 1.3e-09 68.2 76 51.3
Cre12.g530350 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 2.2e-09 67.4 144 38.2
Cre12.g530400 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 1.1e-08 65.1 145 35.9
TAR636G1592 Trochodendron aralioides HOM05D004381 ORTHO05D415991 2.3e-06 57.4 60 55.0
Cre09.g392060 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 5.1e-06 56.2 133 38.3


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