Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G0781 Fragaria x ananassa HOM05D017646 ORTHO05D004423 8.5e-58 226.9 121 100.0
FAN25G3449 Fragaria x ananassa HOM05D017646 ORTHO05D004423 8.5e-58 226.9 121 100.0
FvH4_3g24120 Fragaria vesca HOM05D017646 ORTHO05D004423 2.5e-57 225.3 121 99.2
FAN11G0385 Fragaria x ananassa HOM05D017646 ORTHO05D004423 2.5e-57 225.3 121 99.2
FAN21G3338 Fragaria x ananassa HOM05D017646 ORTHO05D004423 4.7e-56 221.1 121 97.5
FAN16G3200 Fragaria x ananassa HOM05D017646 ORTHO05D004423 8.0e-56 220.3 121 96.7
RcHm_v2.0_Chr5g0042781 Rosa chinensis HOM05D017646 ORTHO05D004423 5.2e-47 191.0 121 87.6
Prupe.4G234900 Prunus persica HOM05D004793 ORTHO05D004423 1.5e-14 83.2 135 48.1
CiPaw.12G136200 Carya illinoinensis HOM05D004793 ORTHO05D004423 4.9e-13 78.2 122 45.9
Haze_09795 Corylus avellana HOM05D004793 ORTHO05D004423 2.1e-11 72.8 108 48.1
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 2.1e-11 72.8 125 46.4
Gohir.D01G074100 Gossypium hirsutum HOM05D004793 ORTHO05D004423 6.0e-11 71.2 118 48.3
Thecc.07G019600 Theobroma cacao HOM05D004793 ORTHO05D004423 7.8e-11 70.9 122 47.5
Cfa020226 Carpinus fangiana HOM05D004793 ORTHO05D004423 1.0e-10 70.5 106 48.1
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 1.7e-10 69.7 122 42.6
Gohir.A01G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.3e-10 69.3 118 48.3
CiPaw.11G201300 Carya illinoinensis HOM05D004793 ORTHO05D004423 5.1e-10 68.2 132 41.7
Duzib170G0463 Durio zibethinus HOM05D004793 ORTHO05D004423 5.1e-10 68.2 115 45.2
Duzib170G0743 Durio zibethinus HOM05D004793 ORTHO05D004423 5.1e-10 68.2 115 45.2
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 6.6e-10 67.8 122 44.3
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 1.1e-09 67.0 136 43.4
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 4.3e-09 65.1 120 40.8
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 7.3e-09 64.3 121 41.3
Lalb_Chr15g0088081 Lupinus albus HOM05D004793 ORTHO05D004423 9.5e-09 63.9 135 39.3
Sed0024469 Sechium edule HOM05D004793 ORTHO05D004423 1.2e-08 63.5 118 43.2
Gohir.D13G138400 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.1e-08 62.8 113 45.1
Gorai.013G155000 Gossypium raimondii HOM05D004793 ORTHO05D004423 2.1e-08 62.8 113 45.1
Sabra06G0011800 Salix brachista HOM05D004793 ORTHO05D004423 2.8e-08 62.4 138 38.4
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 4.7e-08 61.6 137 38.7
Psat4g002280 Pisum sativum HOM05D004793 ORTHO05D004423 4.7e-08 61.6 136 39.0
Prupe.3G201300 Prunus persica HOM05D004793 ORTHO05D004423 8.1e-08 60.8 130 39.2
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 1.4e-07 60.1 123 43.9
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 1.8e-07 59.7 143 38.5
Potri.006G016500 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.8e-07 59.7 135 35.6
CSS0013569 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.3e-07 59.3 121 38.0
GSVIVG01002881001 Vitis vinifera HOM05D000222 ORTHO05D003997 4.0e-07 58.5 130 37.7
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 5.2e-07 58.2 130 39.2
PGR004G1083 Punica granatum HOM05D004793 ORTHO05D004423 5.2e-07 58.2 133 36.8
CSS0021588 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 6.8e-07 57.8 128 36.7
ClCG09G021090 Citrullus lanatus HOM05D004793 ORTHO05D004423 6.8e-07 57.8 123 40.7
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 6.8e-07 57.8 123 41.5
Rhsim04G0014600 Rhododendron simsii HOM05D004793 ORTHO05D004423 6.8e-07 57.8 129 37.2
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 8.9e-07 57.4 133 38.3
Manes.15G062700 Manihot esculenta HOM05D004793 ORTHO05D004423 1.2e-06 57.0 119 43.7
Medtr2g026510 Medicago truncatula HOM05D004793 ORTHO05D004423 1.2e-06 57.0 140 35.7
CsaV3_7G018540 Cucumis sativus L. HOM05D004793 ORTHO05D004423 2.0e-06 56.2 123 39.8
QL05p068872 Quercus lobata HOM05D004793 ORTHO05D004423 2.0e-06 56.2 139 36.0
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 2.6e-06 55.8 141 38.3
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 2.6e-06 55.8 126 38.9
QL05p068371 Quercus lobata HOM05D004793 ORTHO05D004423 2.6e-06 55.8 139 33.8
TPR.G10593 Trifolium pratense HOM05D004793 ORTHO05D004423 2.6e-06 55.8 142 34.5
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 3.4e-06 55.5 126 38.9
Sed0019930 Sechium edule HOM05D028401 ORTHO05D004423 3.4e-06 55.5 150 36.0
Lj2P260T34 Lonicera japonica HOM05D004793 ORTHO05D004423 4.4e-06 55.1 126 41.3
Lj4g0015289 Lotus japonicus HOM05D004793 ORTHO05D004423 4.4e-06 55.1 53 56.6
Potri.016G009200 Populus trichocarpa HOM05D004793 ORTHO05D004423 4.4e-06 55.1 140 34.3
Thecc.06G236700 Theobroma cacao HOM05D004793 ORTHO05D004423 4.4e-06 55.1 138 37.0
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 5.8e-06 54.7 123 43.1
CANSAT56G2188 Cannabis sativa HOM05D004793 ORTHO05D004423 7.6e-06 54.3 150 34.0
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 9.9e-06 53.9 124 37.9
HPP92_023588 Vanilla planifolia HOM05D020977 ORTHO05D004423 9.9e-06 53.9 121 38.8


User provided reference genes

Program Settings