Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 3.2e-181 638.3 320 100.0
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 5.2e-155 551.2 320 88.8
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 2.3e-147 525.8 313 86.3
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 7.5e-146 520.8 314 85.0
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 3.6e-124 448.7 324 73.1
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 1.8e-123 446.4 329 73.3
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 8.4e-121 437.6 260 86.2
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 5.1e-118 428.3 326 68.4
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 1.9e-117 426.4 308 71.1
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 9.6e-117 424.1 325 66.8
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 1.3e-116 423.7 321 69.2
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 2.1e-116 422.9 326 67.2
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 1.4e-115 420.2 322 66.5
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 2.4e-115 419.5 325 67.1
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 4.0e-115 418.7 311 68.8
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 9.0e-115 417.5 310 68.4
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 1.5e-114 416.8 318 67.9
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 2.0e-114 416.4 320 67.5
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 5.8e-114 414.8 296 71.3
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 2.9e-113 412.5 322 66.8
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 2.1e-111 406.4 306 69.0
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 3.5e-111 405.6 304 68.1
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 4.6e-111 405.2 322 64.3
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 3.0e-110 402.5 308 67.5
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 8.7e-110 401.0 311 65.3
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 1.9e-109 399.8 315 65.4
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 3.3e-109 399.1 338 63.9
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 1.6e-108 396.7 315 64.8
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 2.1e-108 396.4 297 69.0
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 1.4e-107 393.7 310 65.8
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 2.4e-107 392.9 316 62.3
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 4.0e-107 392.1 312 64.7
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 9.0e-107 391.0 337 62.3
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 4.5e-106 388.7 326 61.0
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 7.6e-106 387.9 307 63.2
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 7.6e-106 387.9 312 62.8
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 1.0e-105 387.5 317 60.6
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 3.2e-104 382.5 311 61.7
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 3.2e-104 382.5 329 60.8
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 4.2e-104 382.1 312 62.2
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 5.5e-104 381.7 308 64.0
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 1.6e-103 380.2 297 64.3
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 1.6e-103 380.2 344 57.3
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 2.1e-103 379.8 311 61.7
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 2.7e-103 379.4 326 60.1
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 3.5e-103 379.0 240 77.9
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 2.3e-102 376.3 306 62.7
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 5.1e-102 375.2 320 60.9
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 1.9e-101 373.2 322 63.4
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 4.3e-101 372.1 312 62.2
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 7.4e-101 371.3 312 63.1
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 7.4e-101 371.3 327 61.5
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 7.4e-101 371.3 285 64.6
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 8.2e-100 367.9 281 66.9
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 1.1e-99 367.5 302 61.6
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 1.4e-99 367.1 315 61.6
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 2.4e-99 366.3 252 69.4
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 4.1e-99 365.5 268 67.5
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 9.0e-99 364.4 332 61.4
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 2.0e-98 363.2 320 60.0
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 1.0e-97 360.9 273 67.8
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 6.5e-97 358.2 302 60.9
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 2.5e-96 356.3 240 72.9
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 5.5e-96 355.1 308 60.1
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 7.2e-96 354.8 335 57.6
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 4.6e-95 352.1 260 66.5
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 2.3e-94 349.7 312 59.9
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 5.1e-94 348.6 310 57.7
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 1.1e-93 347.4 268 64.9
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 1.9e-93 346.7 312 59.3
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 5.7e-93 345.1 246 69.1
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 1.3e-92 344.0 243 67.1
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 2.2e-92 343.2 309 58.3
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 2.8e-92 342.8 309 57.9
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 3.7e-92 342.4 265 66.0
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 4.8e-92 342.0 316 57.0
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 4.1e-91 339.0 312 58.0
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 5.3e-91 338.6 324 57.1
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 5.3e-91 338.6 324 57.1
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 5.3e-91 338.6 324 57.1
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 9.1e-91 337.8 257 65.0
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 2.0e-90 336.7 307 57.7
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 2.6e-90 336.3 274 61.7
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 1.1e-88 330.9 250 64.8
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 1.2e-87 327.4 240 65.8
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 9.7e-85 317.8 263 60.5
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 3.7e-84 315.8 217 71.4
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 8.2e-84 314.7 173 86.1
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 4.5e-82 308.9 250 61.6
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 5.9e-82 308.5 192 77.1
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 1.0e-81 307.8 190 74.7
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 3.8e-81 305.8 211 71.6
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 5.0e-81 305.4 243 60.5
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 5.5e-80 302.0 184 79.3
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 7.9e-79 298.1 306 54.9
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 1.1e-77 294.3 206 69.4
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 2.6e-77 293.1 191 72.8
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 7.4e-77 291.6 190 72.6
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 7.0e-75 285.0 235 61.7
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 3.0e-70 269.6 279 50.5
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 6.8e-62 241.9 268 52.2
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 6.5e-57 225.3 198 60.6
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 1.8e-54 217.2 193 62.7
CSS0016170 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.0e-49 201.4 124 77.4
CSS0047434 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.3e-49 201.1 124 77.4
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.5e-48 197.6 194 54.6
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 1.8e-46 190.7 250 41.2
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 3.4e-45 186.4 246 40.2
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 7.5e-45 185.3 190 52.6
Cfa020073 Carpinus fangiana HOM05D005997 ORTHO05D008323 1.3e-44 184.5 117 78.6
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 1.8e-43 180.6 249 42.6
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 2.7e-42 176.8 250 40.4
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 3.6e-39 166.4 240 38.3
Atru.chr7.2230 Acer truncatum HOM05D005997 ORTHO05D008323 2.3e-38 163.7 97 79.4
Atru.chr7.2351 Acer truncatum HOM05D005997 ORTHO05D008323 2.3e-38 163.7 97 79.4
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 2.3e-33 147.1 132 56.1
Prupe.4G230300 Prunus persica HOM05D005997 ORTHO05D008323 1.6e-31 141.0 106 69.8
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 1.9e-27 127.5 160 50.0
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 1.6e-26 124.4 160 48.8
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 1.6e-26 124.4 160 48.8
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 6.2e-23 112.5 104 55.8
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 1.5e-21 107.8 62 77.4
CSS0044071 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 9.2e-19 98.6 57 80.7
CSS0025137 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.5e-16 91.3 50 84.0
QL08p004281 Quercus lobata HOM05D005997 ORTHO05D007626 7.3e-16 89.0 113 50.4
QL08p004325 Quercus lobata HOM05D005997 ORTHO05D337094 1.4e-14 84.7 105 50.5
QL11p054366 Quercus lobata HOM05D005997 ORTHO05D338109 1.4e-14 84.7 105 50.5
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 1.1e-11 75.1 156 37.2
Rhsim03G0100400 Rhododendron simsii HOM05D005997 ORTHO05D338268 3.2e-11 73.6 116 40.5
Lsat_1_v5_gn_8_39280 Lactuca sativa HOM05D005997 ORTHO05D230963 3.9e-09 66.6 48 60.4
arahy.Tifrunner.gnm1.ann1.U3B0HF Arachis hypogaea HOM05D003842 ORTHO05D026908 2.8e-07 60.5 36 80.6
QL08p004656 Quercus lobata HOM05D005997 ORTHO05D337365 3.6e-07 60.1 36 77.8


User provided reference genes

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