Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G0522 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.3e-86 321.6 155 100.0
FAN02G1001 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.3e-70 268.1 162 81.5
FAN16G1746 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.1e-65 253.4 162 78.4
FAN25G0543 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.6e-61 238.4 116 96.6
FAN19G1778 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.5e-54 216.5 162 70.4
FAN09G1164 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.4e-49 199.1 162 65.4
FAN18G2686 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.1e-40 169.5 162 53.1
FAN03G2119 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.7e-40 169.1 162 53.1
FAN02G1389 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.3e-39 166.8 156 53.8
FAN16G0942 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.1e-38 163.7 162 50.6
FAN01G1218 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.3e-38 161.0 162 51.9
FAN06G1918 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.4e-36 156.0 170 48.8
FAN11G3115 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.3e-36 154.8 162 49.4
FAN25G2950 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.6e-35 152.5 150 60.0
FAN28G1425 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.4e-35 152.1 162 48.1
RcHm_v2.0_Chr6g0305091 Rosa chinensis HOM05D004516 ORTHO05D005194 8.4e-34 147.5 160 46.9
RcHm_v2.0_Chr5g0059411 Rosa chinensis HOM05D004516 ORTHO05D005194 1.1e-33 147.1 160 46.9
FAN11G1286 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.0e-32 141.4 162 45.7
FAN14G5934 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.0e-31 140.6 162 47.5
FAN14G3645 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.3e-31 140.2 166 45.8
FAN24G3026 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.1e-31 138.3 111 55.0
FAN25G3605 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.7e-31 137.9 91 78.0
FAN07G1082 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.9e-30 136.3 150 46.7
FAN17G2411 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.8e-29 132.5 150 44.7
FAN14G3153 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.1e-29 131.0 143 49.0
FAN07G0140 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.4e-27 125.6 111 53.2
FAN14G3922 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.2e-26 122.9 162 43.8
FAN02G0941 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.5e-26 121.3 162 44.4
FAN14G0824 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.5e-25 119.4 162 42.0
FAN03G2067 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.2e-25 118.6 150 44.0
FAN05G4879 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.1e-25 117.9 93 55.9
FvH4_6g33100 Fragaria vesca HOM05D004516 ORTHO05D005194 1.6e-24 116.7 97 52.6
FAN25G2769 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.8e-23 113.2 107 57.9
FAN06G0871 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.9e-23 112.1 162 42.6
FAN11G2926 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.9e-23 112.1 125 48.0
FAN21G2951 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.3e-22 108.6 93 53.8
FAN18G1599 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.1e-20 102.4 161 41.0
FAN22G0207 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.5e-19 98.6 125 43.2
FAN11G3175 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.0e-18 97.4 69 75.4
FAN25G0220 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.2e-18 96.3 125 44.8
FAN15G0695 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.1e-17 94.0 61 63.9
RcHm_v2.0_Chr4g0392971 Rosa chinensis HOM05D004516 ORTHO05D005194 9.3e-17 90.9 154 33.8
FAN09G1624 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.5e-16 89.0 159 32.7
FAN10G1325 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.5e-16 89.0 159 32.7
FAN17G0177 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.5e-16 89.0 159 32.7
FAN22G0748 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.5e-16 89.0 159 32.7
FAN15G2282 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.6e-16 88.6 159 32.7
FAN09G4587 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.1e-16 88.2 159 32.7
FAN12G4265 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.0e-15 87.4 159 32.7
FAN13G0488 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.3e-15 87.0 61 59.0
FAN09G1891 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.7e-15 84.7 159 32.1
FAN17G2263 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.7e-15 84.7 159 32.1
FAN10G1624 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.7e-15 84.3 159 32.1
FAN12G3269 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.5e-14 82.8 74 50.0
FAN24G2223 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.3e-14 82.0 146 32.2
FAN07G1842 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.4e-14 81.3 157 29.9
FAN07G1174 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.6e-13 80.1 159 31.4
FvH4_3g44301 Fragaria vesca HOM05D004516 ORTHO05D005194 2.8e-13 79.3 157 30.6
FAN06G3758 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.8e-13 79.3 157 31.2
FAN11G1790 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.8e-13 79.3 157 31.2
FAN15G1785 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.8e-13 79.3 157 31.2
FAN23G0994 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.8e-13 79.3 157 31.2
FAN24G2568 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.8e-13 79.3 157 31.2
FAN03G3119 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.7e-13 79.0 157 31.2
FAN09G3758 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.8e-13 78.6 157 31.2
FAN03G2899 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.2e-13 77.8 157 29.9
FAN13G0422 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.1e-12 77.4 157 29.9
FvH4_5g19180 Fragaria vesca HOM05D004516 ORTHO05D005194 2.4e-12 76.3 157 29.9
FAN06G4495 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.1e-12 75.9 125 38.4
FAN25G0689 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.1e-12 75.9 157 29.3
FAN21G2128 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.3e-12 75.1 85 43.5
FAN04G1692 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.4e-11 72.4 157 28.0
FAN02G2246 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.5e-11 72.0 88 48.9
FAN13G1456 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.5e-11 72.0 157 29.3
FAN23G1267 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.5e-11 72.0 157 28.0
FAN12G1193 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.3e-10 70.5 150 29.3
FAN27G1879 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.3e-10 70.5 48 60.4
FAN05G4797 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.9e-10 69.3 92 44.6
FAN05G4935 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.9e-10 69.3 157 29.3
FAN26G2540 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.8e-10 68.9 157 28.0
FAN16G1376 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.5e-10 68.2 89 31.5
Prupe.4G233800 Prunus persica HOM05D004516 ORTHO05D005194 6.5e-10 68.2 104 33.7
FAN03G0909 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.4e-09 67.0 131 29.8
FAN15G0265 Fragaria x ananassa HOM05D004516 ORTHO05D005194 9.4e-09 64.3 93 45.2
FAN02G4561 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.6e-08 63.5 88 44.3
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.6e-08 63.5 113 26.5
MD08G1183800 Malus domestica HOM05D019378 ORTHO05D003172 1.6e-08 63.5 107 28.0
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.1e-08 63.2 113 26.5
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.7e-08 62.8 113 26.5
FAN10G3675 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.7e-08 62.8 147 27.9
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.7e-08 62.8 113 26.5
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.7e-08 62.8 113 26.5
FvH4_6g21610 Fragaria vesca HOM05D004516 ORTHO05D005194 3.6e-08 62.4 117 29.9
FAN05G4171 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.6e-08 62.4 125 33.6
FAN14G1051 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.6e-08 62.4 140 29.3
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 7.9e-08 61.2 159 28.9
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.4e-07 60.5 113 25.7
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 1.8e-07 60.1 164 26.8
FAN10G0238 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.0e-07 59.3 147 28.6
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 3.0e-07 59.3 110 29.1
FAN07G0029 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.9e-07 58.9 150 26.7
FAN08G1224 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.1e-07 58.5 84 45.2
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 6.7e-07 58.2 164 23.2
Haze_17766 Corylus avellana HOM05D001576 ORTHO05D000401 8.8e-07 57.8 95 27.4
TWI23G0314 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 8.8e-07 57.8 109 30.3
TWI56G0638 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 2.0e-06 56.6 109 25.7
TWI23G0178 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 2.5e-06 56.2 109 24.8
TWI56G0559 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 2.5e-06 56.2 109 24.8
TWI74G1447 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 2.5e-06 56.2 109 24.8
Atru.chr1.3225 Acer truncatum HOM05D001576 ORTHO05D010219 4.3e-06 55.5 100 27.0
BcaB02g10737 Brassica carinata HOM05D007743 ORTHO05D004645 4.3e-06 55.5 105 26.7
TWI73G0420 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.3e-06 55.5 73 35.6
CSS0008946 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.7e-06 55.1 140 25.0
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 5.7e-06 55.1 101 27.7
CiPaw.01G110200 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.7e-06 55.1 106 26.4
CiPaw.01G033500 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.4e-06 54.7 106 26.4
CiPaw.05G236500 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.4e-06 54.7 106 26.4
CiPaw.10G028800 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.4e-06 54.7 106 26.4
Haze_20229 Corylus avellana HOM05D001576 ORTHO05D000401 7.4e-06 54.7 89 28.1
Zm00001eb167560 Zea mays HOM05D001576 ORTHO05D000401 7.4e-06 54.7 93 28.0
BcaC08g43897 Brassica carinata HOM05D007743 ORTHO05D004645 9.7e-06 54.3 98 30.6
CiPaw.09G014300 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.7e-06 54.3 106 26.4
CiPaw.10G139700 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.7e-06 54.3 106 26.4
RcHm_v2.0_Chr2g0144051 Rosa chinensis HOM05D007743 ORTHO05D010219 9.7e-06 54.3 108 25.9


User provided reference genes

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