Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 0.0e+00 3258.0 1702 100.0
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 0.0e+00 3198.3 1702 97.5
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 0.0e+00 3181.0 1702 97.8
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 0.0e+00 3179.8 1713 97.3
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 0.0e+00 3148.6 1702 96.8
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 0.0e+00 3028.0 1721 90.5
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 0.0e+00 2720.3 1725 81.2
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 0.0e+00 2682.9 1723 80.6
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 0.0e+00 2548.5 1785 76.9
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 0.0e+00 2519.2 1727 74.9
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 0.0e+00 2511.5 1722 74.2
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 0.0e+00 2499.2 1725 74.6
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 0.0e+00 2494.2 1728 74.7
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 0.0e+00 2463.7 1721 73.0
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 0.0e+00 2462.2 1725 74.3
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 0.0e+00 2455.6 1724 73.5
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 0.0e+00 2427.1 1729 73.9
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 0.0e+00 2421.0 1721 71.6
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 0.0e+00 2419.0 1731 73.4
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 0.0e+00 2406.3 1730 71.7
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 0.0e+00 2404.4 1737 72.5
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 0.0e+00 2386.7 1730 70.6
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 0.0e+00 2385.1 1722 71.5
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 0.0e+00 2383.2 1705 71.2
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 0.0e+00 2367.0 1742 70.2
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 0.0e+00 2366.3 1726 70.9
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 0.0e+00 2356.3 1723 69.8
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 0.0e+00 2356.3 1744 70.0
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 0.0e+00 2348.5 1718 71.1
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 0.0e+00 2341.6 1726 71.4
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 0.0e+00 2340.5 1724 71.6
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 0.0e+00 2338.1 1735 69.8
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 0.0e+00 2335.5 1734 70.1
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 0.0e+00 2326.2 1744 67.7
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 0.0e+00 2323.9 1713 69.7
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 0.0e+00 2320.4 1734 69.4
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 0.0e+00 2318.9 1712 70.5
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 0.0e+00 2318.1 1726 71.0
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 0.0e+00 2303.5 1711 70.3
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 0.0e+00 2303.5 1720 70.9
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 0.0e+00 2300.4 1738 67.4
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 0.0e+00 2290.8 1741 67.7
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 0.0e+00 2285.0 1724 67.3
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 0.0e+00 2280.0 1737 67.5
QL05p053312 Quercus lobata HOM05D004072 ORTHO05D005933 0.0e+00 2274.2 1800 67.7
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 0.0e+00 2261.5 1730 66.6
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 0.0e+00 2254.6 1730 68.7
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 0.0e+00 2254.6 1738 66.9
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 0.0e+00 2252.6 1730 67.2
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 0.0e+00 2228.0 1728 66.7
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 0.0e+00 2219.9 1884 64.4
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 0.0e+00 2219.5 1724 66.4
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 0.0e+00 2216.4 1736 66.2
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 0.0e+00 2205.6 1777 66.1
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 0.0e+00 2202.6 1753 65.1
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 0.0e+00 2198.3 1791 63.7
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 0.0e+00 2197.2 1660 67.9
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 0.0e+00 2196.8 1702 66.5
ECA236G2867 Erigeron canadensis HOM05D004072 ORTHO05D005933 0.0e+00 2196.4 1699 67.2
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 0.0e+00 2191.8 1716 66.2
Psat1g019120 Pisum sativum HOM05D004072 ORTHO05D005933 0.0e+00 2189.1 1412 76.3
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 0.0e+00 2187.5 1738 65.5
ATR0165G006 Amborella trichopoda HOM05D004072 ORTHO05D005933 0.0e+00 2186.4 1734 65.2
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 0.0e+00 2181.0 1712 66.2
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 0.0e+00 2174.1 1710 66.0
Lsat_1_v5_gn_7_29400 Lactuca sativa HOM05D004072 ORTHO05D005933 0.0e+00 2173.7 1705 66.2
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 0.0e+00 2173.3 1714 65.7
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 0.0e+00 2171.4 1705 66.1
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 0.0e+00 2161.7 1696 65.9
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 0.0e+00 2158.3 1715 65.2
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 0.0e+00 2150.2 1714 64.9
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 0.0e+00 2148.2 1707 65.1
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 0.0e+00 2147.1 1705 65.9
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 0.0e+00 2129.8 1692 65.2
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 0.0e+00 2119.0 1755 64.8
Sc24g0001460 Simmondsia chinensis HOM05D004072 ORTHO05D005933 0.0e+00 2110.5 1688 66.6
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 0.0e+00 2110.1 1760 62.8
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 0.0e+00 2089.3 2149 55.2
Peaxi162Scf00670g00114 Petunia axillaris HOM05D004072 ORTHO05D005933 0.0e+00 2067.7 1600 65.9
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 0.0e+00 2065.8 1738 63.5
Glyma.09G084300 Glycine max HOM05D004072 ORTHO05D005933 0.0e+00 2041.2 1290 75.7
VMungo1309G2749 Vigna mungo HOM05D004072 ORTHO05D005933 0.0e+00 2040.8 1294 75.3
Hund21569 Selenicereus undatus HOM05D004072 ORTHO05D005933 0.0e+00 2021.9 1686 63.6
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 0.0e+00 2020.0 1679 62.8
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 0.0e+00 1999.2 1725 62.4
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 0.0e+00 1930.2 1774 57.4
DCAR_003864 Daucus carota HOM05D004072 ORTHO05D005933 0.0e+00 1926.0 1671 61.2
Ciclev10014084m.g Citrus clementina HOM05D004072 ORTHO05D005933 0.0e+00 1916.4 1157 79.4
BcaC01g05784 Brassica carinata HOM05D004072 ORTHO05D005933 0.0e+00 1902.5 1455 66.5
Zm00001eb299970 Zea mays HOM05D004072 ORTHO05D005933 0.0e+00 1893.2 1657 59.7
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 0.0e+00 1816.2 1803 55.7
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 0.0e+00 1798.9 1732 59.0
Rhsim13G0119900 Rhododendron simsii HOM05D004072 ORTHO05D005933 0.0e+00 1761.1 1461 65.7
Pp3c17_7410 Physcomitrium patens HOM05D004072 ORTHO05D005933 0.0e+00 1723.4 1594 56.6
SMO271G0077 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 0.0e+00 1704.9 1731 52.1
SMO308G0046 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 0.0e+00 1697.2 1728 53.6
Pp3c14_11530 Physcomitrium patens HOM05D004072 ORTHO05D005933 0.0e+00 1686.4 1705 52.7
Glyma.15G192700 Glycine max HOM05D004072 ORTHO05D005933 0.0e+00 1662.1 1043 77.0
Mapoly0023s0068 Marchantia polymorpha HOM05D004072 ORTHO05D005933 0.0e+00 1607.0 1668 52.0
Lj1C1164T5 Lonicera japonica HOM05D004072 ORTHO05D005933 0.0e+00 1508.4 934 77.2
HPP92_001000 Vanilla planifolia HOM05D004072 ORTHO05D005933 0.0e+00 1496.5 1080 65.9
Potri.011G090200 Populus trichocarpa HOM05D004072 ORTHO05D005933 0.0e+00 1475.7 1130 69.0
HPP92_000967 Vanilla planifolia HOM05D004072 ORTHO05D005933 0.0e+00 1388.2 1357 57.8
TPR.G28615 Trifolium pratense HOM05D004072 ORTHO05D005933 0.0e+00 1369.4 1123 67.2
THA.LOC104813323 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 0.0e+00 1355.1 1137 65.7
TAR626G0585 Trochodendron aralioides HOM05D004072 ORTHO05D005933 0.0e+00 1150.2 927 67.2
TAR626G0996 Trochodendron aralioides HOM05D004072 ORTHO05D005933 0.0e+00 1143.3 910 63.5
EL10Ac9g22637 Beta vulgaris HOM05D004072 ORTHO05D005933 5.7e-301 1038.5 729 69.0
Hma1.2p1_1600F.1_g293150 Hydrangea macrophylla HOM05D004072 ORTHO05D005933 8.6e-289 998.0 614 79.0
CDE02G3068 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 5.4e-267 925.6 686 63.0
TPR.G28617 Trifolium pratense HOM05D004072 ORTHO05D005933 2.1e-266 923.7 599 74.3
Potri.011G090150 Populus trichocarpa HOM05D004072 ORTHO05D005933 8.4e-252 875.2 554 77.1
CDE02G4494 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 5.6e-248 862.4 787 60.2
CAN.G660.43 Capsicum annuum HOM05D004072 ORTHO05D005933 8.4e-236 822.0 1599 35.1
CBR_g51063 Chara braunii HOM05D004072 ORTHO05D005933 5.1e-209 733.0 847 43.2
Cpa.g.sc17.88 Carica papaya HOM05D004072 ORTHO05D005933 6.1e-194 682.9 423 77.3
RcHm_v2.0_Chr1g0313161 Rosa chinensis HOM05D004072 ORTHO05D005933 5.0e-172 610.1 333 92.2
Glyma.15G192800 Glycine max HOM05D004072 ORTHO05D005933 5.0e-156 557.0 602 59.6
Os07g0148800 Oryza sativa ssp. japonica HOM05D004072 ORTHO05D005933 2.9e-151 541.2 374 70.9
Lj1A1163T36 Lonicera japonica HOM05D004072 ORTHO05D005933 2.1e-130 471.9 649 51.9
Medtr8g464200 Medicago truncatula HOM05D004072 ORTHO05D005933 7.1e-126 456.8 900 33.9
RcHm_v2.0_Chr5g0015771 Rosa chinensis HOM05D004072 ORTHO05D005933 3.3e-123 448.0 340 73.5
Rhsim07G0133800 Rhododendron simsii HOM05D004072 ORTHO05D005933 1.1e-121 443.0 700 38.7
Cpa.g.sc17.87 Carica papaya HOM05D004072 ORTHO05D005933 1.1e-107 396.4 246 74.0
CBR_g58028 Chara braunii HOM05D004072 ORTHO05D005933 1.3e-106 392.9 424 44.8
Cpa.g.sc17.85 Carica papaya HOM05D004072 ORTHO05D005933 3.7e-106 391.3 241 78.4
HPP92_000970 Vanilla planifolia HOM05D004072 ORTHO05D005933 8.5e-103 380.2 522 55.6
CSS0006934 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 3.9e-92 344.7 214 70.1
CSS0027246 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 9.1e-81 307.0 201 76.1
Glyma.09G084500 Glycine max HOM05D004072 ORTHO05D005933 2.1e-77 295.8 392 54.6
Ca_19908_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 2.4e-73 282.3 176 73.3
CSS0044654 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 2.0e-72 279.3 176 71.0
Lj1A1163T37 Lonicera japonica HOM05D004072 ORTHO05D019491 1.3e-58 233.4 153 69.9
VMungo1309G0832 Vigna mungo HOM05D004072 ORTHO05D005933 6.8e-52 211.1 443 46.5
CBR_g34929 Chara braunii HOM05D004072 ORTHO05D005933 2.2e-50 206.1 195 48.7
Cpa.g.sc17.83 Carica papaya HOM05D004072 ORTHO05D005933 3.6e-45 188.7 128 66.4
PGSC0003DMG400021174 Solanum tuberosum HOM05D004072 ORTHO05D005933 8.3e-42 177.6 98 87.8
QL05p053334 Quercus lobata HOM05D004072 ORTHO05D005933 1.1e-41 177.2 98 89.8
Lsat_1_v5_gn_1_88400 Lactuca sativa HOM05D004072 ORTHO05D005933 3.5e-40 172.2 130 60.8
MELO3C003358.2 Cucumis melo HOM05D004072 ORTHO05D005933 1.8e-36 159.8 169 51.5
CBR_g34931 Chara braunii HOM05D000019 ORTHO05D001702 2.1e-32 146.4 112 60.7
Atru.chr10.903 Acer truncatum HOM05D004072 ORTHO05D021063 6.0e-32 144.8 236 45.8
Atru.chr2.7 Acer truncatum HOM05D004072 ORTHO05D005933 1.9e-30 139.8 200 45.0
HanXRQChr09g0247891 Helianthus annuus HOM05D004072 ORTHO05D005933 1.1e-25 124.0 88 68.2
Cc09_g08270 Coffea canephora HOM05D004072 ORTHO05D005933 5.4e-25 121.7 72 80.6
Actinidia04621 Actinidia chinensis HOM05D004072 ORTHO05D005933 1.6e-24 120.2 102 58.8
Medtr3g010273 Medicago truncatula HOM05D004072 ORTHO05D005933 1.6e-24 120.2 93 66.7
Cpa.g.sc17.84 Carica papaya HOM05D004072 ORTHO05D019491 1.0e-23 117.5 83 66.3
Hma1.2p1_1600F.1_g293130 Hydrangea macrophylla HOM05D004072 ORTHO05D005933 2.3e-23 116.3 63 88.9
RcHm_v2.0_Chr1g0313151 Rosa chinensis HOM05D004072 ORTHO05D005933 1.1e-22 114.0 61 95.1
Cpa.g.sc17.80 Carica papaya HOM05D004072 ORTHO05D021063 4.3e-22 112.1 295 35.6
CSS0009414 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 9.6e-22 110.9 61 82.0
vmacro01040 Vaccinium macrocarpon HOM05D000902 ORTHO05D000832 4.8e-21 108.6 214 35.5
Cc09_g08260 Coffea canephora HOM05D004072 ORTHO05D005933 1.8e-20 106.7 74 74.3
CAN.G23816.1 Capsicum annuum HOM05D004072 ORTHO05D038051 8.4e-18 97.8 84 54.8
Actinidia36004 Actinidia chinensis HOM05D004072 ORTHO05D038051 2.1e-16 93.2 58 70.7
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 4.3e-14 85.5 98 40.8
CSS0023750 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D021063 1.3e-13 84.0 306 33.0
PGSC0003DMG400002279 Solanum tuberosum HOM05D004072 ORTHO05D005933 1.6e-13 83.6 49 83.7
Duzib248G0219 Durio zibethinus HOM05D004072 ORTHO05D019491 8.1e-13 81.3 49 77.6
Nn1g03421 Nelumbo nucifera HOM05D004072 ORTHO05D019491 1.8e-12 80.1 51 66.7
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 5.3e-12 78.6 50 76.0
Lsat_1_v5_gn_6_117121 Lactuca sativa HOM05D004072 ORTHO05D001686 1.3e-10 73.9 111 40.5
Lsat_1_v5_gn_6_30620 Lactuca sativa HOM05D000062 ORTHO05D013119 4.9e-10 72.0 166 31.9
CARHR128810 Cardamine hirsuta HOM05D004072 ORTHO05D019491 8.4e-10 71.2 44 65.9
Lsat_1_v5_gn_9_121081 Lactuca sativa HOM05D004072 ORTHO05D001686 1.4e-09 70.5 108 40.7
Lsat_1_v5_gn_7_25100 Lactuca sativa HOM05D003161 ORTHO05D005173 1.9e-09 70.1 68 51.5
Duzib248G0875 Durio zibethinus HOM05D000121 ORTHO05D000102 7.1e-09 68.2 44 75.0
SalBow5G4417 Salvia bowleyana HOM05D004072 ORTHO05D007163 2.1e-08 66.6 95 37.9
Lsat_1_v5_gn_5_73260 Lactuca sativa HOM05D000371 ORTHO05D006177 1.3e-07 63.9 57 54.4
CSS0034048 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D021063 2.3e-07 63.2 285 31.2


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