Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G0502 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.8e-69 265.8 129 100.0
FAN16G0919 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.3e-44 181.8 96 92.7
FvH4_3g39940 Fragaria vesca HOM05D000162 ORTHO05D000090 8.0e-38 160.6 135 65.2
FAN21G0021 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.7e-27 125.2 108 64.8
RcHm_v2.0_Chr5g0071481 Rosa chinensis HOM05D000162 ORTHO05D000090 2.3e-24 115.9 107 61.7
FAN21G3831 Fragaria x ananassa HOM05D000027 ORTHO05D000090 8.6e-24 114.0 104 65.4
FAN21G0329 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.8e-21 106.3 100 63.0
FvH4_3g39650 Fragaria vesca HOM05D000162 ORTHO05D003288 2.0e-20 102.8 64 76.6
FAN11G0438 Fragaria x ananassa HOM05D000027 ORTHO05D001163 2.0e-20 102.8 64 76.6
FAN16G1933 Fragaria x ananassa HOM05D000027 ORTHO05D001163 2.0e-20 102.8 64 76.6
FvH4_3g40130 Fragaria vesca HOM05D000162 ORTHO05D000090 7.0e-18 94.4 101 58.4
FAN11G2498 Fragaria x ananassa HOM05D000044 ORTHO05D000090 3.9e-16 88.6 118 45.8
FAN16G0356 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-13 80.5 121 43.8
FAN11G0861 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.0e-13 78.6 45 77.8
FvH4_3g40110 Fragaria vesca HOM05D000162 ORTHO05D000090 6.8e-13 77.8 45 77.8
RcHm_v2.0_Chr5g0061091 Rosa chinensis HOM05D000162 ORTHO05D000090 8.9e-13 77.4 98 45.9
FvH4_3g13950 Fragaria vesca HOM05D000162 ORTHO05D000090 1.5e-12 76.6 102 51.0
FvH4_4g22280 Fragaria vesca HOM05D000162 ORTHO05D000090 3.4e-12 75.5 94 50.0
FAN07G1221 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.8e-12 74.7 108 50.0
FAN11G0787 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.3e-11 73.6 102 50.0
FAN21G2184 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.3e-11 73.6 88 52.3
FvH4_4g22270 Fragaria vesca HOM05D000162 ORTHO05D000090 3.7e-11 72.0 65 61.5
FAN11G1276 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.7e-11 72.0 106 41.5
FAN12G2315 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.7e-11 72.0 65 61.5
FAN25G3591 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.7e-11 72.0 83 51.8
FAN11G2157 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.4e-11 71.2 119 40.3
Prupe.3G114700 Prunus persica HOM05D000162 ORTHO05D000090 6.4e-11 71.2 108 46.3
RcHm_v2.0_Chr5g0041821 Rosa chinensis HOM05D000162 ORTHO05D000090 6.4e-11 71.2 112 47.3
FvH4_3g38020 Fragaria vesca HOM05D000162 ORTHO05D000090 8.3e-11 70.9 83 50.6
FvH4_3g38070 Fragaria vesca HOM05D000162 ORTHO05D000090 8.3e-11 70.9 83 50.6
FvH4_3g38931 Fragaria vesca HOM05D000162 ORTHO05D000090 1.1e-10 70.5 111 46.8
FAN05G1495 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.4e-10 70.1 88 48.9
FAN16G2116 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.4e-10 70.1 84 51.2
FAN11G2311 Fragaria x ananassa HOM05D000366 ORTHO05D000437 1.9e-10 69.7 116 45.7
FvH4_3g44300 Fragaria vesca HOM05D000162 ORTHO05D000090 2.4e-10 69.3 104 42.3
FAN11G0256 Fragaria x ananassa HOM05D000366 ORTHO05D000090 2.4e-10 69.3 120 39.2
Prupe.6G087600 Prunus persica HOM05D000162 ORTHO05D000090 2.4e-10 69.3 99 47.5
FAN05G1965 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.2e-10 68.9 97 47.4
FAN09G1490 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.2e-10 68.9 97 47.4
FAN05G4021 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.1e-10 68.6 97 47.4
FAN05G5463 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.1e-10 68.6 97 47.4
FAN11G0422 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.1e-10 68.6 83 49.4
MD11G1122400 Malus domestica HOM05D000162 ORTHO05D000090 5.4e-10 68.2 78 44.9
FvH4_6g52550 Fragaria vesca HOM05D000162 ORTHO05D000090 9.2e-10 67.4 93 46.2
RcHm_v2.0_Chr5g0062161 Rosa chinensis HOM05D000162 ORTHO05D000090 9.2e-10 67.4 97 41.2
FAN11G2213 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.2e-09 67.0 87 44.8
RcHm_v2.0_Chr5g0027731 Rosa chinensis HOM05D000162 ORTHO05D000090 1.2e-09 67.0 93 45.2
FAN05G3453 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.6e-09 66.6 97 46.4
FvH4_3g38590 Fragaria vesca HOM05D000162 ORTHO05D000090 2.0e-09 66.2 111 43.2
FAN21G0314 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.0e-09 66.2 105 42.9
FvH4_5g09470 Fragaria vesca HOM05D000162 ORTHO05D000090 3.5e-09 65.5 111 45.0
FAN11G2810 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.5e-09 65.5 105 43.8
FAN21G2264 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.5e-09 65.5 100 43.0
FAN25G0680 Fragaria x ananassa HOM05D004321 ORTHO05D004889 3.5e-09 65.5 131 35.9
RcHm_v2.0_Chr5g0077451 Rosa chinensis HOM05D000162 ORTHO05D000090 3.5e-09 65.5 111 44.1
FAN25G0292 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.6e-09 65.1 107 43.0
FAN05G5046 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.8e-09 64.3 97 45.4
FAN25G0639 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.0e-08 63.9 105 42.9
Prupe.3G138000 Prunus persica HOM05D000162 ORTHO05D000090 1.0e-08 63.9 107 43.9
FAN05G2167 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.3e-08 63.5 88 45.5
RcHm_v2.0_Chr5g0069231 Rosa chinensis HOM05D000162 ORTHO05D000090 1.3e-08 63.5 64 54.7
FAN05G2421 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.7e-08 63.2 97 44.3
FAN16G2035 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.7e-08 63.2 81 44.4
MD03G1113100 Malus domestica HOM05D000162 ORTHO05D000090 1.7e-08 63.2 81 46.9
FvH4_3g35200 Fragaria vesca HOM05D000162 ORTHO05D000090 2.3e-08 62.8 102 40.2
FAN05G5528 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.3e-08 62.8 97 44.3
Prupe.6G093300 Prunus persica HOM05D000162 ORTHO05D000090 3.0e-08 62.4 96 45.8
FAN17G0136 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.9e-08 62.0 117 40.2
MD11G1128700 Malus domestica HOM05D000162 ORTHO05D000090 3.9e-08 62.0 111 39.6
FAN05G4140 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.0e-08 61.6 88 44.3
Prupe.6G086000 Prunus persica HOM05D000162 ORTHO05D000090 5.0e-08 61.6 101 44.6
FAN11G1758 Fragaria x ananassa HOM05D004321 ORTHO05D004889 6.6e-08 61.2 93 38.7
FAN16G0884 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.6e-08 61.2 105 41.0
MD03G1107100 Malus domestica HOM05D000162 ORTHO05D000090 6.6e-08 61.2 81 45.7
Prupe.6G091000 Prunus persica HOM05D000162 ORTHO05D000090 6.6e-08 61.2 96 42.7
RcHm_v2.0_Chr5g0069651 Rosa chinensis HOM05D021378 ORTHO05D000090 6.6e-08 61.2 82 48.8
FAN16G0967 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.6e-08 60.8 90 40.0
Prupe.6G090500 Prunus persica HOM05D000162 ORTHO05D000090 8.6e-08 60.8 97 44.3
MD11G1128400 Malus domestica HOM05D000162 ORTHO05D000090 1.1e-07 60.5 81 42.0
RcHm_v2.0_Chr5g0069321 Rosa chinensis HOM05D000162 ORTHO05D000090 1.1e-07 60.5 91 42.9
RcHm_v2.0_Chr5g0077441 Rosa chinensis HOM05D000162 ORTHO05D000090 1.1e-07 60.5 109 43.1
MD03G1099700 Malus domestica HOM05D000162 ORTHO05D000090 1.5e-07 60.1 81 43.2
FAN17G0052 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.9e-07 59.7 37 73.0
FvH4_3g38940 Fragaria vesca HOM05D000162 ORTHO05D000090 2.5e-07 59.3 92 39.1
Prupe.6G091400 Prunus persica HOM05D000162 ORTHO05D000090 2.5e-07 59.3 87 44.8
Prupe.6G094000 Prunus persica HOM05D000162 ORTHO05D000090 2.5e-07 59.3 107 41.1
FAN11G3415 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.3e-07 58.9 79 45.6
Prupe.6G090600 Prunus persica HOM05D000162 ORTHO05D000090 3.3e-07 58.9 97 44.3
RcHm_v2.0_Chr5g0069261 Rosa chinensis HOM05D000162 ORTHO05D000090 3.3e-07 58.9 45 64.4
FAN05G5335 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.3e-07 58.5 84 44.0
FAN25G3795 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.3e-07 58.5 86 41.9
RcHm_v2.0_Chr5g0074951 Rosa chinensis HOM05D000162 ORTHO05D000090 4.3e-07 58.5 108 44.4
FAN05G2783 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.6e-07 58.2 84 44.0
MD11G1128800 Malus domestica HOM05D000162 ORTHO05D000090 5.6e-07 58.2 81 42.0
FAN02G2649 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.5e-07 57.4 84 44.0
FAN05G5266 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.2e-06 57.0 84 42.9
MD03G1101000 Malus domestica HOM05D000162 ORTHO05D003288 1.2e-06 57.0 81 44.4
MD03G1106000 Malus domestica HOM05D000162 ORTHO05D000090 1.6e-06 56.6 81 43.2
RcHm_v2.0_Chr5g0069351 Rosa chinensis HOM05D000162 ORTHO05D000090 1.6e-06 56.6 92 39.1
FAN21G2507 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.1e-06 56.2 106 40.6
RcHm_v2.0_Chr6g0265911 Rosa chinensis HOM05D010115 ORTHO05D000090 2.1e-06 56.2 99 40.4
MD11G1135500 Malus domestica HOM05D000162 ORTHO05D000090 2.8e-06 55.8 65 46.2
RcHm_v2.0_Chr5g0072901 Rosa chinensis HOM05D000162 ORTHO05D000090 2.8e-06 55.8 123 36.6
QL03p008266 Quercus lobata HOM05D000162 ORTHO05D000090 3.6e-06 55.5 112 36.6
QL05p070010 Quercus lobata HOM05D000162 ORTHO05D000090 3.6e-06 55.5 112 36.6
ECA232G2031 Erigeron canadensis HOM05D000006 ORTHO05D000067 4.7e-06 55.1 39 59.0
RcHm_v2.0_Chr5g0069581 Rosa chinensis HOM05D000162 ORTHO05D000090 4.7e-06 55.1 107 35.5
RcHm_v2.0_Chr5g0077521 Rosa chinensis HOM05D000162 ORTHO05D000090 4.7e-06 55.1 108 41.7
MD11G1115600 Malus domestica HOM05D000162 ORTHO05D000090 6.2e-06 54.7 101 41.6
FAN05G0618 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.1e-06 54.3 84 41.7


User provided reference genes

Program Settings