Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 0.0e+00 2038.5 1039 100.0
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 0.0e+00 1731.8 939 95.3
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 0.0e+00 1567.0 1021 83.0
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 0.0e+00 1513.4 969 84.0
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 0.0e+00 1512.3 1007 81.6
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 0.0e+00 1421.8 1007 77.2
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 0.0e+00 1312.4 823 85.2
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 0.0e+00 1214.1 1002 66.8
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 0.0e+00 1177.5 937 67.3
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 0.0e+00 1112.8 992 61.1
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 2.3e-297 1025.8 999 57.1
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 6.4e-295 1017.7 999 56.3
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 2.8e-290 1002.3 960 57.5
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 7.1e-286 987.6 995 55.9
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 2.1e-285 986.1 960 57.1
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 1.1e-283 980.3 1001 53.7
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 2.1e-282 976.1 991 54.7
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 2.9e-279 965.7 963 56.8
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 1.6e-277 959.9 1000 52.8
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 3.9e-276 955.3 999 53.6
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.5e-275 953.4 997 52.8
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 4.3e-275 951.8 891 58.6
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 5.6e-275 951.4 973 53.1
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 5.6e-275 951.4 1019 51.5
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 5.6e-275 951.4 1000 52.8
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 3.6e-274 948.7 989 53.2
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 4.0e-273 945.3 997 52.6
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 7.6e-272 941.0 1003 52.7
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 1.7e-271 939.9 998 52.4
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 6.4e-271 937.9 997 52.6
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 3.5e-269 932.2 1052 50.6
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 4.3e-267 925.2 999 52.7
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 7.4e-267 924.5 998 51.9
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 6.2e-266 921.4 1035 52.3
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 6.2e-266 921.4 1006 51.9
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 6.2e-266 921.4 991 51.9
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 1.3e-263 913.7 989 51.8
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 1.1e-262 910.6 993 52.5
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 2.8e-258 896.0 990 51.5
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 4.2e-254 882.1 793 59.5
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 2.3e-252 876.3 742 62.7
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 2.5e-251 872.8 798 57.8
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 3.3e-251 872.5 990 50.6
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 2.7e-245 852.8 990 49.0
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 2.7e-237 826.2 1014 48.0
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 2.0e-235 820.1 1006 47.1
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 4.3e-235 818.9 1014 47.3
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 8.2e-234 814.7 998 47.0
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 1.1e-233 814.3 995 47.5
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 4.1e-233 812.4 991 47.5
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 3.8e-231 805.8 985 48.3
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 5.0e-231 805.4 996 47.7
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 1.5e-227 793.9 996 46.4
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 1.3e-226 790.8 996 44.9
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 1.7e-226 790.4 997 46.3
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 4.8e-226 788.9 993 45.5
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 3.1e-225 786.2 994 45.5
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 7.7e-224 781.6 956 46.5
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 1.0e-223 781.2 992 46.2
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 1.2e-221 774.2 992 45.2
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 8.0e-221 771.5 792 54.8
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 4.0e-220 769.2 994 44.5
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 1.3e-218 764.2 989 45.6
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 4.5e-216 755.7 980 44.8
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 4.2e-214 749.2 992 44.8
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 7.2e-214 748.4 994 44.6
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 1.0e-212 744.6 982 45.0
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 6.8e-212 741.9 997 44.8
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 1.3e-210 737.6 994 43.8
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 1.3e-210 737.6 663 57.0
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 5.2e-204 715.7 1014 43.9
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 7.7e-200 701.8 993 42.6
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 1.7e-199 700.7 758 50.3
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 1.3e-194 684.5 1021 42.9
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 3.2e-193 679.9 658 56.1
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 1.1e-190 671.4 920 44.5
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 8.3e-186 655.2 991 42.5
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 1.7e-183 647.5 1043 41.4
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 3.1e-172 610.1 662 51.1
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 5.1e-167 592.8 1038 36.5
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 1.5e-163 581.3 958 39.5
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 4.6e-152 543.1 584 50.9
Lalb_Chr17g0348621 Lupinus albus HOM05D005193 ORTHO05D006316 5.3e-148 529.6 595 51.4
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 7.6e-139 499.2 817 37.2
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 3.2e-137 493.8 840 36.2
Nitab4.5_0000168g0220 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.4e-129 468.4 601 46.1
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 4.8e-125 453.4 765 36.7
arahy.Tifrunner.gnm1.ann1.6PV7EE Arachis hypogaea HOM05D005193 ORTHO05D006316 6.9e-124 449.5 515 49.7
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 2.2e-122 444.5 835 35.1
CSS0020168 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 2.2e-117 427.9 471 50.3
Lj1C877G15 Lonicera japonica HOM05D005193 ORTHO05D006316 2.2e-106 391.3 415 52.3
Nitab4.5_0003450g0040 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.6e-99 368.6 549 42.1
arahy.Tifrunner.gnm1.ann1.89LBMG Arachis hypogaea HOM05D005193 ORTHO05D006316 2.0e-94 351.7 333 55.6
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 1.7e-93 348.6 383 50.4
AagrBONN_evm.TU.Sc2ySwM_344.2169 Anthoceros agrestis HOM05D005193 ORTHO05D006316 3.7e-93 347.4 530 39.2
ATR0585G046 Amborella trichopoda HOM05D005193 ORTHO05D006316 6.5e-90 336.7 441 42.9
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 7.0e-76 290.0 382 44.2
CDE02G4624 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 9.5e-73 279.6 464 39.9
Lj1C877G9 Lonicera japonica HOM05D005193 ORTHO05D006316 6.4e-69 266.9 342 44.4
AUR62015822 Chenopodium quinoa HOM05D005193 ORTHO05D006316 1.9e-52 212.2 398 33.9
SalBow8G4471 Salvia bowleyana HOM05D005193 ORTHO05D006316 5.4e-52 210.7 397 34.3
CDE02G0254 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 3.4e-46 191.4 286 39.9
arahy.Tifrunner.gnm1.ann1.DP08C5 Arachis hypogaea HOM05D005193 ORTHO05D006316 4.4e-46 191.0 337 38.3
arahy.Tifrunner.gnm1.ann1.SW2PFC Arachis hypogaea HOM05D005193 ORTHO05D006316 4.4e-46 191.0 337 38.3
CAN.G1219.3 Capsicum annuum HOM05D005193 ORTHO05D006316 2.7e-43 181.8 207 48.3
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.4e-36 159.5 209 42.6
Lsat_1_v5_gn_6_67380 Lactuca sativa HOM05D005193 ORTHO05D006316 2.1e-35 155.6 274 36.5
Lsat_1_v5_gn_9_67960 Lactuca sativa HOM05D005193 ORTHO05D006316 2.1e-35 155.6 274 36.5
Solyc12g005090.3 Solanum lycopersicum HOM05D005193 ORTHO05D006316 6.2e-32 144.1 202 41.1
CDE02G0065 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 4.0e-31 141.4 207 40.1
ATR0585G123 Amborella trichopoda HOM05D005193 ORTHO05D006316 3.4e-30 138.3 169 46.2
Gorai.011G223800 Gossypium raimondii HOM05D005193 ORTHO05D006316 4.5e-30 137.9 169 46.7
Sabra06G0024500 Salix brachista HOM05D005193 ORTHO05D006316 7.9e-27 127.1 84 70.2
Sabra16G0098300 Salix brachista HOM05D005193 ORTHO05D006316 5.1e-26 124.4 82 70.7
CDE02G4589 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.6e-24 119.4 229 36.2
MD16G1253600 Malus domestica HOM05D005193 ORTHO05D006316 1.1e-23 116.7 63 85.7
AagrBONN_evm.TU.Sc2ySwM_362.1473 Anthoceros agrestis HOM05D005193 ORTHO05D006316 5.8e-22 110.9 115 50.4
arahy.Tifrunner.gnm1.ann1.BLY3DW Arachis hypogaea HOM05D005193 ORTHO05D006316 1.3e-21 109.8 90 60.0
Gohir.D10G199632 Gossypium hirsutum HOM05D005193 ORTHO05D006316 2.2e-21 109.0 140 44.3
CAN.G1219.2 Capsicum annuum HOM05D005193 ORTHO05D006316 1.2e-19 103.2 96 54.2
Peaxi162Scf00660g00119 Petunia axillaris HOM05D005193 ORTHO05D006316 1.5e-17 96.3 152 38.2
CSS0047254 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 9.7e-17 93.6 190 35.3
Haze_09712 Corylus avellana HOM05D005193 ORTHO05D006316 1.6e-16 92.8 112 53.6
Aqoxy4G00029 Aquilegia oxysepala HOM05D002071 ORTHO05D002109 8.2e-16 90.5 97 43.3
GSVIVG01037691001 Vitis vinifera HOM05D005193 ORTHO05D006316 1.4e-15 89.7 108 54.6
EL10Ac4g07765 Beta vulgaris HOM05D005193 ORTHO05D006316 1.8e-15 89.4 259 30.1
FAN11G0724 Fragaria x ananassa HOM05D026217 ORTHO05D004145 3.1e-15 88.6 50 78.0
Cpa.g.sc12.273 Carica papaya HOM05D005193 ORTHO05D006316 4.1e-15 88.2 114 49.1
Gorai.001G274400 Gossypium raimondii HOM05D005193 ORTHO05D006316 5.3e-15 87.8 121 43.0
Gohir.D08G017066 Gossypium hirsutum HOM05D005193 ORTHO05D006316 3.4e-14 85.1 75 58.7
SalBow8G0199 Salvia bowleyana HOM05D005193 ORTHO05D006316 4.5e-14 84.7 87 49.4
CSS0028155 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 6.5e-13 80.9 62 62.9
CSS0039097 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 6.5e-13 80.9 62 62.9
FAN12G2357 Fragaria x ananassa HOM05D000564 ORTHO05D001690 6.5e-13 80.9 50 78.0
Oeu041837.1 Olea europaea HOM05D005193 ORTHO05D006316 6.5e-13 80.9 91 45.1
TPR.G2800 Trifolium pratense HOM05D005193 ORTHO05D006316 2.1e-11 75.9 112 44.6
Eucgr.F03486 Eucalyptus grandis HOM05D005193 ORTHO05D006316 1.0e-10 73.6 117 42.7
FAN11G3332 Fragaria x ananassa HOM05D003102 ORTHO05D009683 3.9e-10 71.6 44 79.5
SEGI_35263 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 1.1e-09 70.1 60 53.3
FAN05G4277 Fragaria x ananassa HOM05D026217 ORTHO05D204344 4.3e-09 68.2 42 78.6
FvH4_6g25391 Fragaria vesca HOM05D000564 ORTHO05D001690 7.4e-09 67.4 50 64.0
SEGI_10601 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 1.4e-07 63.2 79 39.2
Cpa.g.sc12.275 Carica papaya HOM05D005193 ORTHO05D006316 4.1e-07 61.6 95 37.9
SEGI_12195 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 4.1e-07 61.6 76 40.8
ATR0585G071 Amborella trichopoda HOM05D005193 ORTHO05D006316 4.5e-06 58.2 89 34.8


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