Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G0248 Fragaria x ananassa HOM05D003109 ORTHO05D003578 6.3e-293 1010.0 492 100.0
FAN11G2415 Fragaria x ananassa HOM05D003109 ORTHO05D003578 4.5e-198 694.9 418 84.0
FAN25G0950 Fragaria x ananassa HOM05D003109 ORTHO05D003578 8.8e-186 654.1 381 85.6
FvH4_3g13081 Fragaria vesca HOM05D003109 ORTHO05D003578 2.0e-161 573.2 321 87.5
RcHm_v2.0_Chr5g0021311 Rosa chinensis HOM05D003109 ORTHO05D003578 2.8e-147 526.2 321 81.6
RcHm_v2.0_Chr4g0419251 Rosa chinensis HOM05D003109 ORTHO05D003578 1.3e-136 490.7 334 75.7
RcHm_v2.0_Chr5g0021271 Rosa chinensis HOM05D003109 ORTHO05D003578 1.6e-134 483.8 406 62.3
MD10G1226500 Malus domestica HOM05D003109 ORTHO05D003578 7.8e-134 481.5 324 74.1
Prupe.1G101100 Prunus persica HOM05D003109 ORTHO05D003578 1.7e-133 480.3 316 73.4
TWI38G1552 Tripterygium wilfordii HOM05D003109 ORTHO05D003578 3.0e-133 479.6 321 70.7
Cfa001141 Carpinus fangiana HOM05D003109 ORTHO05D003578 3.2e-127 459.5 313 71.2
RcHm_v2.0_Chr5g0021291 Rosa chinensis HOM05D003109 ORTHO05D003578 5.4e-127 458.8 321 74.5
Duzib187G1888 Durio zibethinus HOM05D003109 ORTHO05D003578 1.2e-126 457.6 314 70.1
FAN11G0200 Fragaria x ananassa HOM05D003109 ORTHO05D003578 1.2e-126 457.6 407 58.7
FAN21G3259 Fragaria x ananassa HOM05D003109 ORTHO05D003578 1.6e-126 457.2 407 59.2
CiPaw.10G105800 Carya illinoinensis HOM05D003109 ORTHO05D003578 3.5e-126 456.1 313 69.3
QL10p022110 Quercus lobata HOM05D003109 ORTHO05D003578 3.0e-125 453.0 313 69.0
Potri.003G154900 Populus trichocarpa HOM05D003109 ORTHO05D003578 1.5e-124 450.7 314 68.8
Thecc.09G141000 Theobroma cacao HOM05D003109 ORTHO05D003578 1.5e-124 450.7 308 70.8
Cpa.g.sc30.95 Carica papaya HOM05D003109 ORTHO05D003578 7.3e-124 448.4 308 67.5
Manes.03G071100 Manihot esculenta HOM05D003109 ORTHO05D003578 4.7e-123 445.7 312 68.9
Atru.chr10.654 Acer truncatum HOM05D003109 ORTHO05D003578 1.2e-121 441.0 308 67.2
Gohir.D05G012500 Gossypium hirsutum HOM05D003109 ORTHO05D003578 4.4e-121 439.1 313 67.4
Ciclev10016066m.g Citrus clementina HOM05D003109 ORTHO05D003578 5.8e-121 438.7 308 67.2
Gohir.A05G011600 Gossypium hirsutum HOM05D003109 ORTHO05D003578 7.6e-121 438.3 313 67.4
Gorai.009G012600 Gossypium raimondii HOM05D003109 ORTHO05D003578 8.4e-120 434.9 313 67.1
Sabra03G0112100 Salix brachista HOM05D003109 ORTHO05D003578 1.9e-119 433.7 320 66.2
vmacro03561 Vaccinium macrocarpon HOM05D003109 ORTHO05D003578 1.9e-119 433.7 317 67.8
CANSAT35G0308 Cannabis sativa HOM05D003109 ORTHO05D003578 2.4e-119 433.3 314 66.2
MELO3C007005.2 Cucumis melo HOM05D003109 ORTHO05D003578 7.1e-119 431.8 310 67.1
Gohir.D05G012300 Gossypium hirsutum HOM05D003109 ORTHO05D003578 9.2e-119 431.4 312 67.0
TAR627G0606 Trochodendron aralioides HOM05D003109 ORTHO05D003578 9.2e-119 431.4 309 69.3
CsaV3_6G053040 Cucumis sativus L. HOM05D003109 ORTHO05D003578 7.8e-118 428.3 310 67.4
Dinv26304 Davidia involucrata HOM05D003109 ORTHO05D003578 1.0e-117 427.9 318 67.3
PGR042G3123 Punica granatum HOM05D003109 ORTHO05D003578 2.3e-117 426.8 307 67.4
Ciclev10016075m.g Citrus clementina HOM05D003109 ORTHO05D003578 8.7e-117 424.9 264 73.9
Eucgr.E04318 Eucalyptus grandis HOM05D003109 ORTHO05D003578 8.7e-117 424.9 316 65.5
PGR042G1455 Punica granatum HOM05D003109 ORTHO05D003578 1.5e-116 424.1 307 66.8
GSVIVG01012158001 Vitis vinifera HOM05D003109 ORTHO05D003578 7.3e-116 421.8 305 67.2
Nitab4.5_0011308g0030 Nicotiana tabacum HOM05D003109 ORTHO05D003578 3.6e-115 419.5 312 64.4
Aqoxy4G00011 Aquilegia oxysepala HOM05D003109 ORTHO05D003578 4.8e-115 419.1 308 64.9
Nitab4.5_0000844g0340 Nicotiana tabacum HOM05D003109 ORTHO05D003578 1.1e-114 417.9 312 64.4
ClCG01G025830 Citrullus lanatus HOM05D003109 ORTHO05D003578 1.4e-114 417.5 336 61.6
Peaxi162Scf00036g01013 Petunia axillaris HOM05D003109 ORTHO05D003578 1.8e-114 417.2 312 64.1
Sopen02g026500 Solanum pennellii HOM05D003109 ORTHO05D003578 1.8e-114 417.2 314 64.0
Solyc02g081880.3 Solanum lycopersicum HOM05D003109 ORTHO05D003578 5.3e-114 415.6 314 63.7
FAN21G0114 Fragaria x ananassa HOM05D003109 ORTHO05D003578 6.9e-114 415.2 321 68.2
Lj1A1150T110 Lonicera japonica HOM05D003109 ORTHO05D003578 6.9e-114 415.2 322 64.3
MBI18_g01517_MAGBIO Magnolia biondii HOM05D003109 ORTHO05D003578 6.9e-114 415.2 311 64.3
PGSC0003DMG400007330 Solanum tuberosum HOM05D003109 ORTHO05D003578 2.0e-113 413.7 309 64.1
Sed0014929 Sechium edule HOM05D003109 ORTHO05D003578 2.6e-113 413.3 311 65.3
Sed0008992 Sechium edule HOM05D003109 ORTHO05D003578 3.4e-113 412.9 319 61.8
CAN.G809.44 Capsicum annuum HOM05D003109 ORTHO05D003578 5.8e-113 412.1 309 63.8
THA.LOC104798569 Tarenaya hassleriana HOM05D003109 ORTHO05D003578 2.2e-112 410.2 305 63.0
Rhsim07G0107500 Rhododendron simsii HOM05D003109 ORTHO05D003578 2.9e-112 409.8 339 61.9
Cc09_g04980 Coffea canephora HOM05D003109 ORTHO05D003578 1.1e-111 407.9 310 65.8
Sp6g07560 Schrenkiella parvula HOM05D003109 ORTHO05D003578 1.1e-111 407.9 309 62.1
CSS0007059 Camellia sinensis var. sinensis HOM05D003109 ORTHO05D003578 2.4e-111 406.8 309 63.8
Aa31LG6G12320 Aethionema arabicum HOM05D000969 ORTHO05D000899 1.6e-110 404.1 308 60.7
AT1G30910 Arabidopsis thaliana HOM05D003109 ORTHO05D003578 4.6e-110 402.5 312 60.6
A09p29000 Brassica napus HOM05D003109 ORTHO05D003578 4.6e-110 402.5 312 59.9
DCAR_003753 Daucus carota HOM05D003109 ORTHO05D003578 4.6e-110 402.5 315 61.9
Carub.0001s2928 Capsella rubella HOM05D003109 ORTHO05D003578 7.8e-110 401.7 305 61.3
Glyma.09G050100 Glycine max HOM05D003109 ORTHO05D003578 1.7e-109 400.6 321 60.4
Haze_05250 Corylus avellana HOM05D003109 ORTHO05D003578 2.3e-109 400.2 315 63.5
AL1G45200 Arabidopsis lyrata HOM05D003109 ORTHO05D003578 3.9e-109 399.4 309 60.5
MSTRG.14821 Avicennia marina HOM05D003109 ORTHO05D003578 5.1e-109 399.1 311 63.0
Lalb_Chr20g0114331 Lupinus albus HOM05D003109 ORTHO05D003578 6.6e-109 398.7 320 59.1
Thhalv10011673m.g Eutrema salsugineum HOM05D003109 ORTHO05D003578 1.1e-108 397.9 260 67.7
C09p36850 Brassica napus HOM05D003109 ORTHO05D003578 1.9e-108 397.1 260 68.1
BcaC04g20996 Brassica carinata HOM05D003109 ORTHO05D003578 4.3e-108 396.0 260 67.7
BolC9t56516H Brassica oleracea HOM05D003109 ORTHO05D003578 4.3e-108 396.0 260 67.7
BraA09t38464Z Brassica rapa HOM05D003109 ORTHO05D003578 7.3e-108 395.2 262 68.3
CARHR030480 Cardamine hirsuta HOM05D003109 ORTHO05D003578 1.6e-107 394.0 327 59.3
AUR62008776 Chenopodium quinoa HOM05D003109 ORTHO05D003578 1.6e-107 394.0 308 59.7
Phvul.009G243300 Phaseolus vulgaris HOM05D003109 ORTHO05D003578 2.1e-107 393.7 269 68.0
arahy.Tifrunner.gnm1.ann1.D1QZC1 Arachis hypogaea HOM05D003109 ORTHO05D003578 2.8e-107 393.3 308 62.0
THA.LOC104811863 Tarenaya hassleriana HOM05D003109 ORTHO05D003578 4.8e-107 392.5 314 57.6
ECA248G0390 Erigeron canadensis HOM05D003109 ORTHO05D003578 8.1e-107 391.7 260 68.1
VMungo1309G0023 Vigna mungo HOM05D003109 ORTHO05D003578 8.1e-107 391.7 313 60.1
Thhalv10000970m.g Eutrema salsugineum HOM05D003109 ORTHO05D003578 1.1e-106 391.3 312 59.3
BolC7t43294H Brassica oleracea HOM05D003109 ORTHO05D003578 3.1e-106 389.8 347 54.5
Glyma.09G049900 Glycine max HOM05D003109 ORTHO05D003578 3.1e-106 389.8 315 60.0
HanXRQChr01g0006281 Helianthus annuus HOM05D003109 ORTHO05D003578 5.3e-106 389.0 309 60.2
Sp2g09530 Schrenkiella parvula HOM05D003109 ORTHO05D003578 1.2e-105 387.9 312 58.3
SGA_v2.0_scaffold341G49369 Striga asiatica HOM05D003109 ORTHO05D003578 1.5e-105 387.5 312 60.6
EL10Ac7g17661 Beta vulgaris HOM05D003109 ORTHO05D003578 2.0e-105 387.1 263 66.5
VMungo1309G1953 Vigna mungo HOM05D003109 ORTHO05D003578 2.0e-105 387.1 310 60.6
ATR0763G182 Amborella trichopoda HOM05D003109 ORTHO05D003578 2.6e-105 386.7 309 60.8
AL8G14810 Arabidopsis lyrata HOM05D003109 ORTHO05D003578 4.5e-105 386.0 319 58.6
BcaC06g34519 Brassica carinata HOM05D003109 ORTHO05D003578 4.5e-105 386.0 323 57.0
Migut.K00496 Erythranthe guttata HOM05D003109 ORTHO05D003578 4.5e-105 386.0 313 60.1
Phvul.009G243200 Phaseolus vulgaris HOM05D003109 ORTHO05D003578 4.5e-105 386.0 310 60.6
BcaB07g30929 Brassica carinata HOM05D003109 ORTHO05D003578 5.8e-105 385.6 323 57.6
A06p46990 Brassica napus HOM05D003109 ORTHO05D003578 5.8e-105 385.6 329 55.9
Zm00001eb104730 Zea mays HOM05D003109 ORTHO05D003578 5.8e-105 385.6 312 58.0
Nitab4.5_0001499g0020 Nicotiana tabacum HOM05D003109 ORTHO05D003578 7.6e-105 385.2 312 60.6
BcaC06g31591 Brassica carinata HOM05D003109 ORTHO05D003578 9.9e-105 384.8 312 58.7
C07p27620 Brassica napus HOM05D003109 ORTHO05D003578 9.9e-105 384.8 323 56.7
Lj2A342T113 Lonicera japonica HOM05D003109 ORTHO05D003578 9.9e-105 384.8 324 60.5
Os09g0560700 Oryza sativa ssp. japonica HOM05D003109 ORTHO05D003578 9.9e-105 384.8 312 58.7
BraA06t27571Z Brassica rapa HOM05D003109 ORTHO05D003578 1.3e-104 384.4 321 57.3
Medtr2g035470 Medicago truncatula HOM05D003109 ORTHO05D003578 3.8e-104 382.9 314 58.9
Hund12397 Selenicereus undatus HOM05D003109 ORTHO05D003578 3.8e-104 382.9 321 57.9
TPR.G26578 Trifolium pratense HOM05D003109 ORTHO05D003578 3.8e-104 382.9 311 58.5
arahy.Tifrunner.gnm1.ann1.4IPC1A Arachis hypogaea HOM05D003109 ORTHO05D003578 4.9e-104 382.5 331 57.7
BraA09t37733Z Brassica rapa HOM05D003109 ORTHO05D003578 8.4e-104 381.7 316 57.6
EL10Ac7g17662 Beta vulgaris HOM05D003109 ORTHO05D003578 1.4e-103 380.9 311 57.6
BolC9t55590H Brassica oleracea HOM05D003109 ORTHO05D003578 1.4e-103 380.9 316 57.0
CARHR178180 Cardamine hirsuta HOM05D003109 ORTHO05D003578 1.4e-103 380.9 319 58.0
Ca_01981_v3 Cicer arietinum L. HOM05D003109 ORTHO05D003578 1.9e-103 380.6 317 58.4
AT5G44720 Arabidopsis thaliana HOM05D003109 ORTHO05D003578 2.4e-103 380.2 312 58.3
Hma1.2p1_0185F.1_g081450 Hydrangea macrophylla HOM05D003109 ORTHO05D003578 2.4e-103 380.2 235 75.7
Psat1g150920 Pisum sativum HOM05D003109 ORTHO05D003578 2.4e-103 380.2 314 58.0
CAN.G97.16 Capsicum annuum HOM05D003109 ORTHO05D003578 3.2e-103 379.8 311 58.8
AUR62025463 Chenopodium quinoa HOM05D003109 ORTHO05D003578 3.2e-103 379.8 316 57.6
Atru.chr10.286 Acer truncatum HOM05D003109 ORTHO05D003578 4.2e-103 379.4 395 49.9
PGSC0003DMG400015860 Solanum tuberosum HOM05D003109 ORTHO05D003578 5.4e-103 379.0 308 59.4
Carub.0008s0354 Capsella rubella HOM05D003109 ORTHO05D003578 9.3e-103 378.3 319 57.4
Thhalv10001183m.g Eutrema salsugineum HOM05D003109 ORTHO05D003578 3.5e-102 376.3 262 64.9
Medtr2g035480 Medicago truncatula HOM05D003109 ORTHO05D003578 6.0e-102 375.6 314 56.7
Sp2g09560 Schrenkiella parvula HOM05D003109 ORTHO05D003578 6.0e-102 375.6 319 56.7
Lj6g0023516 Lotus japonicus HOM05D003109 ORTHO05D003578 1.1e-100 371.3 316 56.6
Aa31LG9G8450 Aethionema arabicum HOM05D003109 ORTHO05D003578 5.6e-100 369.0 261 64.4
Sopen01g018350 Solanum pennellii HOM05D003109 ORTHO05D003578 5.6e-100 369.0 308 58.4
Actinidia33648 Actinidia chinensis HOM05D003109 ORTHO05D003578 7.4e-100 368.6 308 60.7
Medtr2g035460 Medicago truncatula HOM05D003109 ORTHO05D003578 1.3e-99 367.9 311 55.6
C09p27070 Brassica napus HOM05D003109 ORTHO05D003578 2.8e-99 366.7 260 63.8
COL.COLO4_24113 Corchorus olitorius HOM05D005861 ORTHO05D003578 4.8e-99 365.9 307 59.0
PSO675G6279 Papaver somniferum HOM05D003109 ORTHO05D003578 4.8e-99 365.9 310 58.1
Lsat_1_v5_gn_5_150720 Lactuca sativa HOM05D003109 ORTHO05D003578 1.1e-98 364.8 267 64.4
BcaB01g01432 Brassica carinata HOM05D003109 ORTHO05D003578 1.4e-98 364.4 264 63.3
HanXRQChr10g0286441 Helianthus annuus HOM05D003109 ORTHO05D003578 3.1e-98 363.2 314 57.3
HPP92_016418 Vanilla planifolia HOM05D003109 ORTHO05D003578 6.9e-98 362.1 308 56.8
Cc09_g05010 Coffea canephora HOM05D003109 ORTHO05D003578 2.0e-97 360.5 359 51.3
Os09g0560800 Oryza sativa ssp. japonica HOM05D003109 ORTHO05D003578 4.5e-97 359.4 316 53.2
PSO675G7745 Papaver somniferum HOM05D003109 ORTHO05D003578 4.5e-97 359.4 310 57.1
Sc17g0004290 Simmondsia chinensis HOM05D003109 ORTHO05D003578 4.5e-97 359.4 282 59.2
BcaC04g21820 Brassica carinata HOM05D003109 ORTHO05D003578 6.5e-96 355.5 316 54.4
Ah.08g218200 Amaranthus hybridus HOM05D003109 ORTHO05D003578 5.5e-95 352.4 284 59.2
HanXRQChr10g0286421 Helianthus annuus HOM05D003109 ORTHO05D003578 9.3e-95 351.7 311 55.9
BcaC04g21819 Brassica carinata HOM05D003109 ORTHO05D003578 4.6e-94 349.4 315 52.7
BolC9t55591H Brassica oleracea HOM05D003109 ORTHO05D003578 4.6e-94 349.4 315 52.7
DCAR_004346 Daucus carota HOM05D003109 ORTHO05D003578 4.6e-94 349.4 303 54.8
BcaB07g30928 Brassica carinata HOM05D003109 ORTHO05D003578 1.8e-93 347.4 312 53.2
BraA09t37734Z Brassica rapa HOM05D003109 ORTHO05D003578 1.8e-93 347.4 315 52.1
Migut.M02018 Erythranthe guttata HOM05D003109 ORTHO05D003578 1.5e-92 344.4 315 52.4
Lj6g0002854 Lotus japonicus HOM05D003109 ORTHO05D003578 2.5e-92 343.6 307 54.7
A09p21270 Brassica napus HOM05D003109 ORTHO05D003578 1.2e-89 334.7 241 62.7
Lsat_1_v5_gn_9_33520 Lactuca sativa HOM05D003109 ORTHO05D003578 1.2e-89 334.7 306 54.6
Gorai.N022400 Gossypium raimondii HOM05D003109 ORTHO05D003578 3.8e-88 329.7 313 54.3
Zm00001eb104710 Zea mays HOM05D003109 ORTHO05D003578 1.4e-87 327.8 221 67.0
SGA_v2.0_scaffold171G38866 Striga asiatica HOM05D003109 ORTHO05D003578 5.5e-87 325.9 247 59.9
Peaxi162Scf00273g01119 Petunia axillaris HOM05D003109 ORTHO05D003578 1.3e-85 321.2 314 53.5
SalBow8G1655 Salvia bowleyana HOM05D003109 ORTHO05D003578 6.7e-85 318.9 288 51.7
Lj2C342T6 Lonicera japonica HOM05D003109 ORTHO05D003578 1.3e-83 314.7 250 60.4
Atru.chr10.290 Acer truncatum HOM05D003109 ORTHO05D003578 1.1e-82 311.6 233 63.5
Nn7g38363 Nelumbo nucifera HOM05D003109 ORTHO05D003578 9.0e-82 308.5 307 52.8
Oeu018411.1 Olea europaea HOM05D003109 ORTHO05D003578 1.0e-80 305.1 208 70.2
arahy.Tifrunner.gnm1.ann1.QDY45T Arachis hypogaea HOM05D003109 ORTHO05D003578 8.5e-80 302.0 223 62.3
Rhsim05G0003100 Rhododendron simsii HOM05D003109 ORTHO05D003578 2.1e-78 297.4 327 51.1
Zm00001eb104720 Zea mays HOM05D003109 ORTHO05D003578 7.9e-78 295.4 207 65.2
FvH4_3g13080 Fragaria vesca HOM05D003109 ORTHO05D003578 2.3e-77 293.9 209 68.9
HPP92_016334 Vanilla planifolia HOM05D003109 ORTHO05D003578 5.1e-77 292.7 272 52.6
Dinv26326 Davidia involucrata HOM05D003109 ORTHO05D003578 5.7e-76 289.3 226 63.7
Pp3c20_4970 Physcomitrium patens HOM05D003109 ORTHO05D003578 1.5e-73 281.2 313 46.3
SMO143G0025 Selaginella moellendorffii HOM05D003109 ORTHO05D003578 1.4e-71 274.6 262 51.5
Mapoly0004s0282 Marchantia polymorpha HOM05D003109 ORTHO05D003578 3.9e-69 266.5 264 50.8
SalBow7G1084 Salvia bowleyana HOM05D003109 ORTHO05D003578 1.2e-65 255.0 245 53.5
ECA247G2038 Erigeron canadensis HOM05D003109 ORTHO05D004733 1.9e-63 247.7 263 50.2
AagrBONN_evm.TU.Sc2ySwM_228.2820 Anthoceros agrestis HOM05D003109 ORTHO05D003578 2.5e-63 247.3 256 51.6
CDE01G0767 Ceratophyllum demersum HOM05D003109 ORTHO05D003578 6.7e-61 239.2 310 43.9
FAN16G3712 Fragaria x ananassa HOM05D003109 ORTHO05D003578 2.8e-59 233.8 156 71.8
RcHm_v2.0_Chr5g0008621 Rosa chinensis HOM05D003109 ORTHO05D003578 2.2e-56 224.2 150 70.7
Nitab4.5_0004630g0010 Nicotiana tabacum HOM05D003109 ORTHO05D003578 5.7e-52 209.5 134 73.9
RcHm_v2.0_Chr4g0396471 Rosa chinensis HOM05D003109 ORTHO05D003578 1.3e-51 208.4 148 68.2
FvH4_2g11200 Fragaria vesca HOM05D003109 ORTHO05D003578 2.2e-51 207.6 103 93.2
Cre09.g389089 Chlamydomonas reinhardtii HOM05D003109 ORTHO05D003578 2.8e-51 207.2 287 42.9
Solyc01g044370.3 Solanum lycopersicum HOM05D003109 ORTHO05D003578 6.3e-51 206.1 238 46.2
MCO13G003 Micromonas commoda HOM05D003109 ORTHO05D003578 2.7e-46 190.7 259 45.6
Aa31sc456G20 Aethionema arabicum HOM05D003109 ORTHO05D003578 2.3e-45 187.6 190 49.5
AagrBONN_evm.TU.Sc2ySwM_344.550 Anthoceros agrestis HOM05D003109 ORTHO05D003578 1.3e-43 181.8 270 40.4
AagrBONN_evm.TU.Sc2ySwM_362.279 Anthoceros agrestis HOM05D003109 ORTHO05D003578 4.9e-43 179.9 265 41.5
RcHm_v2.0_Chr5g0021301 Rosa chinensis HOM05D003109 ORTHO05D003578 1.8e-42 177.9 129 70.5
Atru.chr10.222 Acer truncatum HOM05D003109 ORTHO05D003578 4.1e-42 176.8 113 69.0
Nitab4.5_0004630g0030 Nicotiana tabacum HOM05D003109 ORTHO05D003578 7.0e-42 176.0 172 50.6
RcHm_v2.0_Chr6g0272271 Rosa chinensis HOM05D003109 ORTHO05D003578 1.2e-41 175.3 140 62.9
RcHm_v2.0_Chr2g0118971 Rosa chinensis HOM05D003109 ORTHO05D003578 1.0e-40 172.2 140 60.7
FAN25G0852 Fragaria x ananassa HOM05D003109 ORTHO05D003578 2.8e-38 164.1 81 98.8
BcaC06g34511 Brassica carinata HOM05D003109 ORTHO05D003578 1.5e-36 158.3 152 48.0
FAN20G2767 Fragaria x ananassa HOM05D003109 ORTHO05D003578 1.3e-35 155.2 83 92.8
Pp3c12_23100 Physcomitrium patens HOM05D003109 ORTHO05D003578 1.3e-35 155.2 266 39.5
C07p27690 Brassica napus HOM05D003109 ORTHO05D003578 2.9e-35 154.1 141 50.4
PRCOL_00004579 Prasinoderma coloniale HOM05D003109 ORTHO05D003578 6.3e-35 152.9 311 34.7
FAN15G2849 Fragaria x ananassa HOM05D003109 ORTHO05D003578 1.4e-34 151.8 112 71.4
unitig_748.g7553 Utricularia gibba HOM05D003109 ORTHO05D003578 1.8e-34 151.4 343 32.7
Migut.O00468 Erythranthe guttata HOM05D003109 ORTHO05D003578 1.2e-33 148.7 189 45.0
CARHR258260 Cardamine hirsuta HOM05D003109 ORTHO05D003578 5.9e-33 146.4 89 70.8
BolC7t43300H Brassica oleracea HOM05D003109 ORTHO05D003578 7.8e-33 146.0 141 49.6
HanXRQChr07g0191351 Helianthus annuus HOM05D003109 ORTHO05D003578 2.5e-31 141.0 86 72.1
RcHm_v2.0_Chr1g0318861 Rosa chinensis HOM05D003109 ORTHO05D003578 2.6e-28 131.0 134 53.0
Os06g0670000 Oryza sativa ssp. japonica HOM05D005437 ORTHO05D006699 9.2e-26 122.5 279 29.7
SMO144G0105 Selaginella moellendorffii HOM05D005437 ORTHO05D006699 3.5e-25 120.6 261 30.3
HanXRQChr02g0057671 Helianthus annuus HOM05D003109 ORTHO05D003578 6.0e-25 119.8 89 59.6
CSS0016293 Camellia sinensis var. sinensis HOM05D003109 ORTHO05D003578 3.0e-24 117.5 155 43.9
HanXRQChr08g0226421 Helianthus annuus HOM05D000943 ORTHO05D002475 4.3e-23 113.6 80 67.5
PGR102G1747 Punica granatum HOM05D005437 ORTHO05D006699 5.6e-23 113.2 289 29.4
Rhsim07G0107000 Rhododendron simsii HOM05D005100 ORTHO05D005607 7.3e-23 112.8 124 50.0
Manes.06G173000 Manihot esculenta HOM05D005437 ORTHO05D006699 9.5e-23 112.5 244 28.7
C05p14850 Brassica napus HOM05D005437 ORTHO05D006699 1.6e-22 111.7 264 25.0
PSO675G2460 Papaver somniferum HOM05D005437 ORTHO05D006699 2.1e-22 111.3 271 27.3
Eucgr.F01464 Eucalyptus grandis HOM05D005437 ORTHO05D006699 4.7e-22 110.2 271 29.5
Gohir.D01G027500 Gossypium hirsutum HOM05D005437 ORTHO05D006699 4.7e-22 110.2 250 29.2
HanXRQChr10g0291791 Helianthus annuus HOM05D003109 ORTHO05D003578 4.7e-22 110.2 78 66.7
Nn7g37999 Nelumbo nucifera HOM05D005437 ORTHO05D006699 8.1e-22 109.4 365 26.0
Zm00001eb274240 Zea mays HOM05D005437 ORTHO05D006699 8.1e-22 109.4 278 28.8
Zm00001eb389990 Zea mays HOM05D005437 ORTHO05D006699 8.1e-22 109.4 282 28.7
BraA06t24417Z Brassica rapa HOM05D005437 ORTHO05D006699 1.4e-21 108.6 279 25.1
Thhalv10006808m.g Eutrema salsugineum HOM05D005437 ORTHO05D006699 1.8e-21 108.2 277 25.3
Sp1g14710 Schrenkiella parvula HOM05D005437 ORTHO05D006699 1.8e-21 108.2 278 24.8
AL1G28710 Arabidopsis lyrata HOM05D005437 ORTHO05D006699 2.3e-21 107.8 277 25.3
A06p12540 Brassica napus HOM05D005437 ORTHO05D006699 3.1e-21 107.5 279 24.4
Carub.0001s1630 Capsella rubella HOM05D005437 ORTHO05D006699 3.1e-21 107.5 277 26.0
Duzib268G1426 Durio zibethinus HOM05D005437 ORTHO05D006699 3.1e-21 107.5 252 27.8
Migut.M01548 Erythranthe guttata HOM05D005437 ORTHO05D006699 3.1e-21 107.5 248 27.8
Gorai.002G036800 Gossypium raimondii HOM05D005437 ORTHO05D006699 3.1e-21 107.5 254 28.3
Peaxi162Scf00452g00721 Petunia axillaris HOM05D005437 ORTHO05D006699 3.1e-21 107.5 257 28.0
BcaC05g25518 Brassica carinata HOM05D005437 ORTHO05D006699 4.0e-21 107.1 264 25.0
BolC5t30200H Brassica oleracea HOM05D005437 ORTHO05D006699 4.0e-21 107.1 264 25.0
AagrBONN_evm.TU.Sc2ySwM_344.1621 Anthoceros agrestis HOM05D005437 ORTHO05D006699 5.2e-21 106.7 254 28.0
Gohir.A01G039700 Gossypium hirsutum HOM05D005437 ORTHO05D006699 5.2e-21 106.7 248 27.8
ATR0763G170 Amborella trichopoda HOM05D005437 ORTHO05D006699 6.8e-21 106.3 295 26.4
CSS0042223 Camellia sinensis var. sinensis HOM05D005437 ORTHO05D006699 6.8e-21 106.3 266 27.4
Ciclev10004324m.g Citrus clementina HOM05D005437 ORTHO05D006699 6.8e-21 106.3 306 27.5
Dinv19612 Davidia involucrata HOM05D005437 ORTHO05D006699 6.8e-21 106.3 274 27.0
HanXRQChr11g0335011 Helianthus annuus HOM05D005437 ORTHO05D006699 8.9e-21 105.9 251 27.9
Thecc.07G149800 Theobroma cacao HOM05D005437 ORTHO05D006699 8.9e-21 105.9 240 27.1
HPP92_026356 Vanilla planifolia HOM05D005437 ORTHO05D006699 1.2e-20 105.5 289 27.7
AUR62016581 Chenopodium quinoa HOM05D005437 ORTHO05D006699 1.5e-20 105.1 259 25.5
FAN16G0636 Fragaria x ananassa HOM05D005437 ORTHO05D006699 2.0e-20 104.8 273 26.4
Solyc07g066480.3 Solanum lycopersicum HOM05D005437 ORTHO05D006699 2.0e-20 104.8 256 27.3
Actinidia12783 Actinidia chinensis HOM05D005437 ORTHO05D006699 3.4e-20 104.0 248 28.2
Rhsim06G0239800 Rhododendron simsii HOM05D005437 ORTHO05D006699 3.4e-20 104.0 279 25.8
SEGI_23870 Sequoiadendron giganteum HOM05D005437 ORTHO05D006699 3.4e-20 104.0 272 25.4
THA.LOC104812356 Tarenaya hassleriana HOM05D005437 ORTHO05D006699 3.4e-20 104.0 278 27.0
FvH4_3g15600 Fragaria vesca HOM05D005437 ORTHO05D006699 4.4e-20 103.6 267 26.6
FAN11G3430 Fragaria x ananassa HOM05D005437 ORTHO05D006699 4.4e-20 103.6 267 26.6
FAN21G1213 Fragaria x ananassa HOM05D005437 ORTHO05D006699 4.4e-20 103.6 255 26.7
Sopen07g034660 Solanum pennellii HOM05D005437 ORTHO05D006699 4.4e-20 103.6 256 27.3
PGSC0003DMG400022125 Solanum tuberosum HOM05D005437 ORTHO05D006699 4.4e-20 103.6 260 26.5
CANSAT80G2640 Cannabis sativa HOM05D005437 ORTHO05D006699 5.8e-20 103.2 282 25.2
Lalb_Chr01g0008201 Lupinus albus HOM05D005437 ORTHO05D006699 2.2e-19 101.3 263 25.1
Oeu036617.1 Olea europaea HOM05D005437 ORTHO05D006699 2.9e-19 100.9 274 27.4
COL.COLO4_36739 Corchorus olitorius HOM05D005437 ORTHO05D006699 3.7e-19 100.5 249 28.1
Mapoly0055s0057 Marchantia polymorpha HOM05D005437 ORTHO05D006699 6.4e-19 99.8 283 27.6
CAN.G943.42 Capsicum annuum HOM05D005437 ORTHO05D006699 8.3e-19 99.4 257 27.6
RcHm_v2.0_Chr5g0026221 Rosa chinensis HOM05D005437 ORTHO05D006699 8.3e-19 99.4 281 24.9
Atru.chr12.1132 Acer truncatum HOM05D003109 ORTHO05D003578 1.1e-18 99.0 66 69.7
Glyma.09G002300 Glycine max HOM05D005437 ORTHO05D006699 1.1e-18 99.0 264 25.0
TWI39G0192 Tripterygium wilfordii HOM05D005437 ORTHO05D006699 1.1e-18 99.0 274 27.0
Aqoxy1G01551_Aqoxy1G01552 Aquilegia oxysepala HOM05D005437 ORTHO05D006699 1.4e-18 98.6 269 26.4
ECA236G0150 Erigeron canadensis HOM05D005437 ORTHO05D006699 1.4e-18 98.6 246 25.2
Potri.007G066400 Populus trichocarpa HOM05D005437 ORTHO05D006699 1.9e-18 98.2 266 26.7
EL10Ac9g21866 Beta vulgaris HOM05D005437 ORTHO05D006699 2.4e-18 97.8 263 26.6
CsaV3_6G013680 Cucumis sativus L. HOM05D005437 ORTHO05D006699 3.2e-18 97.4 248 26.6
Duzib213G0844 Durio zibethinus HOM05D005437 ORTHO05D006699 3.2e-18 97.4 270 25.2
Sed0015468 Sechium edule HOM05D005437 ORTHO05D006699 3.2e-18 97.4 270 26.7
CiPaw.11G065200 Carya illinoinensis HOM05D005437 ORTHO05D006699 4.1e-18 97.1 240 27.5
Oeu056065.1 Olea europaea HOM05D003109 ORTHO05D003578 4.1e-18 97.1 89 53.9
TPR.G34170 Trifolium pratense HOM05D005437 ORTHO05D006699 4.1e-18 97.1 240 25.8
Psat7g228480 Pisum sativum HOM05D005437 ORTHO05D006699 7.1e-18 96.3 286 26.9
Hma1.2p1_0637F.1_g193460 Hydrangea macrophylla HOM05D005437 ORTHO05D006699 1.2e-17 95.5 248 25.8
Lj3g0019331 Lotus japonicus HOM05D005437 ORTHO05D006699 1.2e-17 95.5 278 25.2
GSVIVG01020355001 Vitis vinifera HOM05D005437 ORTHO05D006699 1.2e-17 95.5 270 27.0
SalBow8G5394 Salvia bowleyana HOM05D005437 ORTHO05D006699 2.1e-17 94.7 278 27.3
Sc20g0003070 Simmondsia chinensis HOM05D005437 ORTHO05D006699 2.1e-17 94.7 276 25.4
Cc05_g16200 Coffea canephora HOM05D005437 ORTHO05D006699 3.5e-17 94.0 276 28.6
MD05G1221200 Malus domestica HOM05D005437 ORTHO05D006699 3.5e-17 94.0 268 26.1
Medtr4g030930 Medicago truncatula HOM05D005437 ORTHO05D006699 3.5e-17 94.0 259 24.3
VMungo1127G0204 Vigna mungo HOM05D005437 ORTHO05D006699 3.5e-17 94.0 266 24.1
Pp3c5_23340 Physcomitrium patens HOM05D005437 ORTHO05D006699 4.6e-17 93.6 277 27.8
MELO3C019659.2 Cucumis melo HOM05D005437 ORTHO05D006699 7.8e-17 92.8 267 25.5
Sabra07G0053300 Salix brachista HOM05D005437 ORTHO05D006699 7.8e-17 92.8 266 25.6
Aa31LG7G1090 Aethionema arabicum HOM05D005437 ORTHO05D006699 1.0e-16 92.4 296 24.0
AUR62011473 Chenopodium quinoa HOM05D005437 ORTHO05D006699 5.1e-16 90.1 246 29.7
Prupe.4G138400 Prunus persica HOM05D005437 ORTHO05D006699 5.1e-16 90.1 251 25.1
AL6G46400 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 6.6e-16 89.7 54 70.4
DCAR_005093 Daucus carota HOM05D003109 ORTHO05D003578 8.6e-16 89.4 126 37.3
Lsat_1_v5_gn_7_111601 Lactuca sativa HOM05D005437 ORTHO05D006699 3.3e-15 87.4 260 26.2
vmacro11674 Vaccinium macrocarpon HOM05D005437 ORTHO05D006699 1.1e-13 82.4 349 23.5
HanXRQChr08g0233221 Helianthus annuus HOM05D003109 ORTHO05D003578 1.4e-13 82.0 61 65.6
arahy.Tifrunner.gnm1.ann1.K3W397 Arachis hypogaea HOM05D005437 ORTHO05D006699 2.6e-12 77.8 241 22.8
Cfa021674 Carpinus fangiana HOM05D003109 ORTHO05D003578 5.8e-12 76.6 315 26.7
arahy.Tifrunner.gnm1.ann1.49XUJ3 Arachis hypogaea HOM05D005437 ORTHO05D006699 7.6e-12 76.3 240 22.5
Nitab4.5_0001080g0010 Nicotiana tabacum HOM05D005437 ORTHO05D006699 7.6e-12 76.3 224 24.1
QL04p076801 Quercus lobata HOM05D005437 ORTHO05D006699 1.7e-11 75.1 334 22.8
Cpa.g.sc67.58 Carica papaya HOM05D005437 ORTHO05D006699 2.2e-11 74.7 123 32.5
SGA_v2.0_scaffold186G40210 Striga asiatica HOM05D005437 ORTHO05D006699 2.9e-11 74.3 201 26.4
BcaC06g31589 Brassica carinata HOM05D003109 ORTHO05D003578 1.1e-10 72.4 76 43.4
RcHm_v2.0_Chr3g0492021 Rosa chinensis HOM05D003109 ORTHO05D003578 1.9e-10 71.6 126 40.5
AT1G16540 Arabidopsis thaliana HOM05D005437 ORTHO05D006699 4.1e-10 70.5 208 23.1
Rhsim13G0134500 Rhododendron simsii HOM05D003109 ORTHO05D050678 7.1e-10 69.7 80 43.8
RhsimUnG0177400 Rhododendron simsii HOM05D003109 ORTHO05D050678 7.1e-10 69.7 80 43.8
SEGI_18652 Sequoiadendron giganteum HOM05D005437 ORTHO05D006699 7.1e-10 69.7 155 28.4
unitig_748.g7634 Utricularia gibba HOM05D005437 ORTHO05D006699 1.7e-08 65.1 151 29.1
Haze_08576 Corylus avellana HOM05D005437 ORTHO05D006699 6.6e-08 63.2 148 28.4
MCO10G344 Micromonas commoda HOM05D005437 ORTHO05D006699 6.6e-08 63.2 307 23.5
Lj8A189G27 Lonicera japonica HOM05D005437 ORTHO05D006699 1.9e-07 61.6 130 26.2
DCAR_014149 Daucus carota HOM05D003109 ORTHO05D003578 4.3e-07 60.5 65 44.6
PRCOL_00000624 Prasinoderma coloniale HOM05D005437 ORTHO05D006699 3.6e-06 57.4 161 31.7


User provided reference genes

Program Settings