Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G0187 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.9e-101 372.5 182 100.0
FAN21G1312 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.0e-38 164.1 166 55.4
FvH4_1g02011 Fragaria vesca HOM05D001729 ORTHO05D001155 1.1e-35 154.1 194 51.0
FAN11G2795 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-35 153.3 142 57.7
FAN11G3734 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-35 153.3 142 57.7
FAN19G0745 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.0e-35 152.1 194 50.5
FAN26G1025 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.6e-34 149.4 194 48.5
FAN16G1493 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.8e-34 148.3 156 56.4
FvH4_3g43730 Fragaria vesca HOM05D001729 ORTHO05D001155 1.7e-33 146.7 220 42.7
FvH4_3g43770 Fragaria vesca HOM05D001729 ORTHO05D001155 1.7e-33 146.7 142 55.6
FAN21G1715 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.4e-32 141.7 148 54.1
RcHm_v2.0_Chr2g0089331 Rosa chinensis HOM05D001729 ORTHO05D001155 4.6e-31 138.7 139 56.8
FvH4_3g44582 Fragaria vesca HOM05D001729 ORTHO05D001155 7.8e-31 137.9 120 61.7
FAN13G3182 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.3e-19 98.6 110 51.8
Prupe.1G509700 Prunus persica HOM05D001729 ORTHO05D001155 9.3e-16 87.8 150 41.3
Prupe.1G509300 Prunus persica HOM05D001729 ORTHO05D001155 1.0e-14 84.3 150 39.3
FvH4_3g44471 Fragaria vesca HOM05D001729 ORTHO05D001155 2.3e-14 83.2 144 41.0
FAN16G0249 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-14 83.2 144 41.0
RcHm_v2.0_Chr2g0163051 Rosa chinensis HOM05D001729 ORTHO05D001155 3.9e-14 82.4 118 45.8
FvH4_6g46241 Fragaria vesca HOM05D001729 ORTHO05D001155 5.1e-14 82.0 176 37.5
FvH4_3g30171 Fragaria vesca HOM05D001729 ORTHO05D001155 6.7e-14 81.6 116 44.8
FAN11G2672 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.7e-14 81.6 116 44.8
FAN14G1791 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.9e-13 80.1 137 40.1
FvH4_4g31310 Fragaria vesca HOM05D001729 ORTHO05D001155 3.3e-13 79.3 139 36.7
Prupe.1G510700 Prunus persica HOM05D001729 ORTHO05D001155 7.4e-13 78.2 151 40.4
Prupe.3G059500 Prunus persica HOM05D001729 ORTHO05D001155 7.4e-13 78.2 117 38.5
FvH4_3g35490 Fragaria vesca HOM05D001729 ORTHO05D001155 4.8e-12 75.5 155 39.4
FAN11G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-11 73.9 121 39.7
FAN16G2506 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-11 73.9 121 39.7
MD09G1201600 Malus domestica HOM05D001729 ORTHO05D001155 1.4e-11 73.9 118 36.4
FvH4_3g44510 Fragaria vesca HOM05D001729 ORTHO05D001155 2.4e-11 73.2 121 38.8
RcHm_v2.0_Chr2g0123691 Rosa chinensis HOM05D001729 ORTHO05D001155 3.1e-11 72.8 119 42.9
RcHm_v2.0_Chr5g0081211 Rosa chinensis HOM05D001729 ORTHO05D001155 4.0e-11 72.4 121 38.8
FAN02G3094 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.3e-11 72.0 116 41.4
RcHm_v2.0_Chr7g0221261 Rosa chinensis HOM05D001729 ORTHO05D001155 5.3e-11 72.0 148 37.2
FvH4_6g45291 Fragaria vesca HOM05D001729 ORTHO05D001155 6.9e-11 71.6 127 38.6
FAN14G0421 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.9e-11 71.6 127 38.6
MD04G1180900 Malus domestica HOM05D001729 ORTHO05D001155 6.9e-11 71.6 118 39.8
MD05G1244200 Malus domestica HOM05D001729 ORTHO05D001155 6.9e-11 71.6 126 36.5
Prupe.3G265100 Prunus persica HOM05D001729 ORTHO05D001155 6.9e-11 71.6 144 37.5
FAN14G3193 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-10 70.5 118 39.8
FvH4_6g45890 Fragaria vesca HOM05D001729 ORTHO05D001155 2.0e-10 70.1 118 39.8
FAN11G0139 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.6e-10 69.7 155 38.1
FAN14G0370 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.6e-10 69.7 150 34.7
RcHm_v2.0_Chr6g0276071 Rosa chinensis HOM05D001729 ORTHO05D001155 2.6e-10 69.7 118 39.8
FAN15G1054 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.5e-10 68.9 122 40.2
FvH4_2g19920 Fragaria vesca HOM05D001729 ORTHO05D001155 5.8e-10 68.6 122 38.5
FAN24G2147 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.8e-10 68.6 122 38.5
RcHm_v2.0_Chr2g0164721 Rosa chinensis HOM05D001729 ORTHO05D001155 5.8e-10 68.6 150 34.7
FAN05G2911 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.6e-10 68.2 116 40.5
FAN09G4277 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.9e-10 67.8 102 43.1
Prupe.1G512600 Prunus persica HOM05D001729 ORTHO05D001155 9.9e-10 67.8 143 38.5
FvH4_6g46242 Fragaria vesca HOM05D001729 ORTHO05D001155 1.3e-09 67.4 150 34.0
RcHm_v2.0_Chr6g0275871 Rosa chinensis HOM05D001729 ORTHO05D001155 1.3e-09 67.4 118 39.0
FvH4_6g46280 Fragaria vesca HOM05D001729 ORTHO05D001155 2.2e-09 66.6 153 34.0
FAN14G0866 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.9e-09 66.2 160 34.4
RcHm_v2.0_Chr5g0021011 Rosa chinensis HOM05D001729 ORTHO05D001155 2.9e-09 66.2 117 37.6
RcHm_v2.0_Chr6g0285591 Rosa chinensis HOM05D001729 ORTHO05D001155 2.9e-09 66.2 124 41.1
FvH4_6g46240 Fragaria vesca HOM05D001729 ORTHO05D001155 4.9e-09 65.5 158 35.4
FAN25G0589 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.4e-09 65.1 133 38.3
MD02G1008900 Malus domestica HOM05D001729 ORTHO05D001155 6.4e-09 65.1 152 33.6
FvH4_6g39371 Fragaria vesca HOM05D001729 ORTHO05D001155 8.4e-09 64.7 134 35.1
FAN08G1373 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.4e-09 64.7 148 35.8
FAN09G2757 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.4e-09 64.7 134 35.1
FAN14G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.4e-09 64.7 134 35.1
MD02G1008700 Malus domestica HOM05D001729 ORTHO05D001155 8.4e-09 64.7 144 34.7
RcHm_v2.0_Chr2g0164671 Rosa chinensis HOM05D001729 ORTHO05D001155 1.1e-08 64.3 119 37.0
FvH4_6g37041 Fragaria vesca HOM05D001729 ORTHO05D001155 1.4e-08 63.9 85 44.7
FAN09G2508 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-08 63.9 153 31.4
FAN18G1542 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-08 63.9 148 37.2
FAN18G4057 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-08 63.9 148 37.2
FAN27G2714 Fragaria x ananassa HOM05D001115 ORTHO05D001023 1.4e-08 63.9 120 39.2
RcHm_v2.0_Chr1g0380481 Rosa chinensis HOM05D001729 ORTHO05D001155 1.4e-08 63.9 158 32.9
FAN05G4264 Fragaria x ananassa HOM05D001526 ORTHO05D001417 1.9e-08 63.5 148 33.8
FAN21G3055 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.9e-08 63.5 54 55.6
COL.COLO4_30695 Corchorus olitorius HOM05D001729 ORTHO05D001155 4.2e-08 62.4 122 32.8
FAN02G4556 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.5e-08 62.0 78 46.2
FAN07G0471 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.5e-08 62.0 154 34.4
FAN16G0429 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.1e-08 61.6 58 55.2
Sabra11G0003700 Salix brachista HOM05D001729 ORTHO05D001155 7.1e-08 61.6 135 34.8
FAN06G0177 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.3e-08 61.2 128 36.7
FvH4_6g01541 Fragaria vesca HOM05D001729 ORTHO05D001155 1.2e-07 60.8 78 46.2
FvH4_6g20231 Fragaria vesca HOM05D001729 ORTHO05D001155 1.2e-07 60.8 78 43.6
FAN14G1187 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-07 60.8 78 46.2
FAN14G2874 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-07 60.8 78 46.2
FAN19G1733 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-07 60.8 143 32.2
FAN07G0163 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.6e-07 60.5 54 53.7
FAN07G1354 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.6e-07 60.5 54 53.7
FAN02G0048 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.1e-07 60.1 160 33.1
FAN09G1958 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.1e-07 60.1 111 33.3
FvH4_4g17782 Fragaria vesca HOM05D001729 ORTHO05D001155 3.5e-07 59.3 54 50.0
FAN14G3807 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.5e-07 59.3 135 30.4
FAN14G5781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.5e-07 59.3 135 30.4
Potri.011G004800 Populus trichocarpa HOM05D001729 ORTHO05D001155 3.5e-07 59.3 153 33.3
FvH4_4g16921 Fragaria vesca HOM05D001729 ORTHO05D001155 4.6e-07 58.9 46 58.7
FvH4_4g18120 Fragaria vesca HOM05D001729 ORTHO05D001155 4.6e-07 58.9 54 53.7
FAN12G2239 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.6e-07 58.9 46 58.7
RcHm_v2.0_Chr2g0163011 Rosa chinensis HOM05D001729 ORTHO05D001155 7.9e-07 58.2 98 36.7
COL.COLO4_30694 Corchorus olitorius HOM05D001729 ORTHO05D001155 1.0e-06 57.8 114 29.8
Prupe.3G246100 Prunus persica HOM05D001729 ORTHO05D001155 1.3e-06 57.4 92 39.1
FAN02G2194 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-06 56.6 71 49.3
FAN05G3901 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-06 56.6 65 47.7
FAN25G0505 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.9e-06 55.8 31 90.3
Prupe.3G059600 Prunus persica HOM05D001729 ORTHO05D001155 5.1e-06 55.5 109 33.0
FAN02G0583 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.7e-06 54.7 46 54.3
FAN12G2308 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.7e-06 54.7 46 56.5


User provided reference genes

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