Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G0108 Fragaria x ananassa HOM05D005342 ORTHO05D198972 2.4e-73 279.3 198 100.0
FAN16G1572 Fragaria x ananassa HOM05D005342 ORTHO05D006925 1.8e-25 120.2 165 69.7
FAN21G1494 Fragaria x ananassa HOM05D005342 ORTHO05D006925 5.3e-25 118.6 164 61.0
FAN11G0369 Fragaria x ananassa HOM05D005342 ORTHO05D006925 1.0e-23 114.4 165 69.1
FvH4_3g12950 Fragaria vesca HOM05D005342 ORTHO05D006925 5.5e-22 108.6 166 68.1
RcHm_v2.0_Chr5g0021061 Rosa chinensis HOM05D005342 ORTHO05D006925 1.2e-19 100.9 165 64.2
FAN09G0512 Fragaria x ananassa HOM05D005342 ORTHO05D006925 1.0e-15 87.8 40 100.0
FAN23G3012 Fragaria x ananassa HOM05D005342 ORTHO05D210339 1.0e-15 87.8 40 100.0
FAN17G0428 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.0e-15 85.5 46 87.0
FAN15G2006 Fragaria x ananassa HOM05D001443 ORTHO05D001352 6.5e-15 85.1 73 68.5
FAN16G3470 Fragaria x ananassa HOM05D000515 ORTHO05D001911 2.6e-11 73.2 48 79.2
FAN21G1232 Fragaria x ananassa HOM05D000515 ORTHO05D001911 2.6e-11 73.2 48 79.2
Ciclev10015344m.g Citrus clementina HOM05D005342 ORTHO05D006925 2.8e-10 69.7 99 70.7
MD10G1227500 Malus domestica HOM05D005342 ORTHO05D006925 6.3e-10 68.6 107 62.6
MD05G1246900 Malus domestica HOM05D005342 ORTHO05D006925 2.4e-09 66.6 107 70.1
vmacro21284 Vaccinium macrocarpon HOM05D005342 ORTHO05D006925 4.1e-09 65.9 100 39.0
Glyma.07G173800 Glycine max HOM05D005342 ORTHO05D006925 5.4e-09 65.5 102 53.9
CANSAT35G0196 Cannabis sativa HOM05D005342 ORTHO05D006925 9.2e-09 64.7 103 65.0
CiPaw.09G137700 Carya illinoinensis HOM05D005342 ORTHO05D006925 1.6e-08 63.9 108 68.5
Haze_05265 Corylus avellana HOM05D005342 ORTHO05D006925 2.0e-08 63.5 106 70.8
Sed0018199 Sechium edule HOM05D005342 ORTHO05D006925 2.0e-08 63.5 105 69.5
TAR626G0514 Trochodendron aralioides HOM05D005342 ORTHO05D006925 2.0e-08 63.5 100 37.0
Cfa001127 Carpinus fangiana HOM05D005342 ORTHO05D006925 3.5e-08 62.8 105 52.4
Atru.chr10.317 Acer truncatum HOM05D005342 ORTHO05D006925 4.5e-08 62.4 92 71.7
Atru.chr10.349 Acer truncatum HOM05D005342 ORTHO05D006925 4.5e-08 62.4 92 71.7
Atru.chr10.358 Acer truncatum HOM05D002757 ORTHO05D003252 4.5e-08 62.4 92 71.7
Cpa.g.sc30.113 Carica papaya HOM05D005342 ORTHO05D006925 5.9e-08 62.0 94 39.4
Manes.03G075200 Manihot esculenta HOM05D005342 ORTHO05D006925 1.0e-07 61.2 102 66.7
Phvul.003G015000 Phaseolus vulgaris HOM05D005342 ORTHO05D006925 1.3e-07 60.8 133 51.9
PSO017G0115 Papaver somniferum HOM05D005342 ORTHO05D006925 1.7e-07 60.5 103 36.9
Prupe.4G117500 Prunus persica HOM05D005342 ORTHO05D006925 1.7e-07 60.5 108 65.7
QL11p012260 Quercus lobata HOM05D005342 ORTHO05D006925 1.7e-07 60.5 94 75.5
GSVIVG01012146001 Vitis vinifera HOM05D005342 ORTHO05D006925 1.7e-07 60.5 100 42.0
arahy.Tifrunner.gnm1.ann1.T4IDLE Arachis hypogaea HOM05D005342 ORTHO05D006925 2.3e-07 60.1 106 40.6
PSO063G2198 Papaver somniferum HOM05D005342 ORTHO05D006925 2.3e-07 60.1 103 36.9
arahy.Tifrunner.gnm1.ann1.EGN9M7 Arachis hypogaea HOM05D005342 ORTHO05D006925 2.9e-07 59.7 106 58.5
Lalb_Chr10g0095551 Lupinus albus HOM05D005342 ORTHO05D006925 2.9e-07 59.7 88 48.9
Rhsim03G0048600 Rhododendron simsii HOM05D005342 ORTHO05D006925 2.9e-07 59.7 105 63.8
Dinv11757 Davidia involucrata HOM05D005342 ORTHO05D006925 8.6e-07 58.2 110 39.1
Dinv36886 Davidia involucrata HOM05D005342 ORTHO05D006925 8.6e-07 58.2 108 39.8
Sabra01G0131500 Salix brachista HOM05D005342 ORTHO05D006925 8.6e-07 58.2 95 41.1
vmacro07644 Vaccinium macrocarpon HOM05D005342 ORTHO05D006925 1.9e-06 57.0 103 47.6
MELO3C007034.2 Cucumis melo HOM05D005342 ORTHO05D006925 3.3e-06 56.2 104 61.5
PGR004G0306 Punica granatum HOM05D005342 ORTHO05D006925 3.3e-06 56.2 105 38.1
CsaV3_6G052760 Cucumis sativus L. HOM05D005342 ORTHO05D006925 4.3e-06 55.8 104 41.3
Duzib132G0347 Durio zibethinus HOM05D005342 ORTHO05D006925 4.3e-06 55.8 100 45.0
Ca_26328_v3 Cicer arietinum L. HOM05D005342 ORTHO05D006925 7.3e-06 55.1 104 56.7
Thecc.02G004100 Theobroma cacao HOM05D005342 ORTHO05D006925 9.5e-06 54.7 101 32.7


User provided reference genes

Program Settings