Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G0075 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-40 169.5 85 100.0
FAN11G1276 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.4e-11 70.1 62 56.5
FAN11G2157 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.6e-10 69.3 65 52.3
RcHm_v2.0_Chr5g0077451 Rosa chinensis HOM05D000162 ORTHO05D000090 3.6e-10 68.2 47 70.2
FAN17G0136 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.1e-10 67.4 62 54.8
FAN16G0356 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.9e-10 67.0 62 54.8
FAN11G2810 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.0e-09 66.6 65 49.2
FAN21G0314 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.8e-09 65.9 65 49.2
FAN17G0052 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.3e-09 65.5 65 53.8
FAN25G0292 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.3e-09 65.5 65 47.7
FAN25G0485 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.3e-09 65.5 45 68.9
FAN25G0639 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.3e-09 65.5 65 49.2
RcHm_v2.0_Chr5g0069321 Rosa chinensis HOM05D000162 ORTHO05D000090 5.1e-09 64.3 58 53.4
RcHm_v2.0_Chr5g0078801 Rosa chinensis HOM05D000162 ORTHO05D000090 8.8e-09 63.5 45 62.2
FAN21G2507 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-08 63.2 63 49.2
FvH4_6g52550 Fragaria vesca HOM05D000162 ORTHO05D000090 1.5e-08 62.8 76 43.4
FAN09G1490 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.5e-08 62.8 76 43.4
RcHm_v2.0_Chr5g0077441 Rosa chinensis HOM05D000162 ORTHO05D000090 1.5e-08 62.8 60 58.3
FAN16G0884 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.9e-08 62.4 65 46.2
FvH4_3g42120 Fragaria vesca HOM05D000162 ORTHO05D000090 3.3e-08 61.6 112 36.6
FAN11G1404 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.3e-08 61.6 112 36.6
RcHm_v2.0_Chr5g0069581 Rosa chinensis HOM05D000162 ORTHO05D000090 3.3e-08 61.6 55 54.5
FvH4_3g37480 Fragaria vesca HOM05D000162 ORTHO05D000090 4.3e-08 61.2 45 62.2
RcHm_v2.0_Chr5g0072901 Rosa chinensis HOM05D000162 ORTHO05D000090 5.7e-08 60.8 56 53.6
RcHm_v2.0_Chr5g0074951 Rosa chinensis HOM05D000162 ORTHO05D000090 7.4e-08 60.5 49 65.3
FAN05G1495 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.7e-08 60.1 60 50.0
FAN05G1965 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.7e-08 60.1 60 50.0
RcHm_v2.0_Chr5g0074981 Rosa chinensis HOM05D000162 ORTHO05D000090 1.3e-07 59.7 69 52.2
FvH4_3g38940 Fragaria vesca HOM05D000162 ORTHO05D000090 2.8e-07 58.5 45 57.8
FAN05G4140 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.8e-07 58.5 58 51.7
FAN05G5335 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.8e-07 58.5 58 51.7
FAN25G3795 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.7e-07 58.2 60 51.7
RcHm_v2.0_Chr5g0069351 Rosa chinensis HOM05D000162 ORTHO05D000090 3.7e-07 58.2 58 53.4
FAN05G4021 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.8e-07 57.8 60 48.3
FAN05G5463 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.8e-07 57.8 60 48.3
FAN16G2035 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.8e-07 57.8 83 39.8
ECA232G2031 Erigeron canadensis HOM05D000006 ORTHO05D000067 6.3e-07 57.4 62 43.5
FAN11G2213 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.3e-07 57.4 42 64.3
FAN18G0007 Fragaria x ananassa HOM05D003302 ORTHO05D003785 6.3e-07 57.4 52 53.8
FAN21G1710 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.3e-07 57.4 84 36.9
MD11G1128400 Malus domestica HOM05D000162 ORTHO05D000090 6.3e-07 57.4 50 54.0
RcHm_v2.0_Chr5g0027731 Rosa chinensis HOM05D000162 ORTHO05D000090 6.3e-07 57.4 76 40.8
FvH4_4g22270 Fragaria vesca HOM05D000162 ORTHO05D000090 8.2e-07 57.0 45 55.6
FAN05G2421 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.2e-07 57.0 58 50.0
FAN05G5528 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.2e-07 57.0 58 50.0
FAN12G2315 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.2e-07 57.0 45 55.6
FAN21G0329 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.2e-07 57.0 81 40.7
FvH4_3g44300 Fragaria vesca HOM05D000162 ORTHO05D000090 1.1e-06 56.6 56 53.6
FAN05G3453 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-06 56.6 42 61.9
FAN11G0256 Fragaria x ananassa HOM05D000366 ORTHO05D000090 1.1e-06 56.6 56 53.6
RcHm_v2.0_Chr5g0077521 Rosa chinensis HOM05D000162 ORTHO05D000090 1.1e-06 56.6 42 69.0
FvH4_3g38590 Fragaria vesca HOM05D000162 ORTHO05D000090 1.4e-06 56.2 60 46.7
FAN16G2116 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.4e-06 56.2 63 46.0
MD11G1128800 Malus domestica HOM05D000162 ORTHO05D000090 1.8e-06 55.8 57 47.4
FvH4_3g13950 Fragaria vesca HOM05D000162 ORTHO05D000090 2.4e-06 55.5 65 43.1
FvH4_3g38020 Fragaria vesca HOM05D000162 ORTHO05D000090 2.4e-06 55.5 83 37.3
FvH4_3g38070 Fragaria vesca HOM05D000162 ORTHO05D000090 2.4e-06 55.5 83 37.3
FvH4_4g22280 Fragaria vesca HOM05D000162 ORTHO05D000090 2.4e-06 55.5 45 53.3
FAN05G2167 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.4e-06 55.5 58 50.0
FAN05G5046 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.4e-06 55.5 58 50.0
MD03G1099700 Malus domestica HOM05D000162 ORTHO05D000090 2.4e-06 55.5 56 48.2
RcHm_v2.0_Chr5g0061091 Rosa chinensis HOM05D000162 ORTHO05D000090 2.4e-06 55.5 66 43.9
FvH4_3g35200 Fragaria vesca HOM05D000162 ORTHO05D000090 3.1e-06 55.1 45 57.8
FAN04G2497 Fragaria x ananassa HOM05D003302 ORTHO05D003785 3.1e-06 55.1 52 51.9
FAN16G2089 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.1e-06 55.1 45 57.8
FvH4_5g09470 Fragaria vesca HOM05D000162 ORTHO05D000090 4.1e-06 54.7 42 61.9
FAN21G1717 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.1e-06 54.7 45 57.8
FAN05G0618 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.3e-06 54.3 58 48.3
FAN05G2783 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.3e-06 54.3 58 50.0
MD11G1128700 Malus domestica HOM05D000162 ORTHO05D000090 5.3e-06 54.3 50 52.0
FAN16G1190 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.9e-06 53.9 60 48.3
FAN21G2184 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.9e-06 53.9 60 46.7
Medtr6g445320 Medicago truncatula HOM05D000162 ORTHO05D000090 6.9e-06 53.9 59 40.7
RcHm_v2.0_Chr5g0041821 Rosa chinensis HOM05D000162 ORTHO05D000090 6.9e-06 53.9 72 41.7
RcHm_v2.0_Chr5g0069231 Rosa chinensis HOM05D000162 ORTHO05D000090 6.9e-06 53.9 58 46.6
FvH4_3g40940 Fragaria vesca HOM05D000162 ORTHO05D000090 9.1e-06 53.5 48 50.0
FAN02G2649 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.1e-06 53.5 58 48.3
FAN16G0919 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.1e-06 53.5 45 53.3


User provided reference genes

Program Settings