Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.9e-227 791.2 420 100.0
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 5.5e-213 744.2 427 94.1
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.6e-212 742.7 427 93.9
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.0e-211 740.0 427 93.7
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 5.5e-197 691.0 430 87.0
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 9.2e-184 647.1 367 95.4
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 3.6e-172 608.6 427 77.5
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 4.7e-172 608.2 427 77.3
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 6.2e-156 554.7 439 70.2
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 3.8e-153 545.4 427 68.9
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 1.6e-151 540.0 435 66.4
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 3.5e-151 538.9 432 69.0
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 7.8e-151 537.7 465 65.4
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 6.6e-150 534.6 437 68.6
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 6.6e-150 534.6 443 66.4
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 8.6e-150 534.3 438 65.8
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 7.3e-149 531.2 443 66.1
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 1.6e-148 530.0 434 67.1
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 8.1e-148 527.7 427 67.0
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 1.4e-147 526.9 427 66.7
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 8.4e-145 517.7 433 65.6
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 3.5e-143 512.3 435 66.2
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 3.5e-143 512.3 436 66.5
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 3.5e-143 512.3 438 63.7
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 6.0e-143 511.5 431 66.1
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 2.3e-142 509.6 437 64.8
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 3.0e-142 509.2 418 66.3
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 5.1e-142 508.4 431 65.7
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 2.5e-141 506.1 436 64.9
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 2.5e-141 506.1 436 64.9
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 9.6e-141 504.2 431 65.0
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 2.1e-140 503.1 427 64.2
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 3.6e-140 502.3 424 65.8
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 1.4e-139 500.4 428 64.0
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 1.8e-139 500.0 435 64.8
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 1.8e-139 500.0 433 64.0
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 3.1e-139 499.2 435 63.4
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 4.0e-139 498.8 432 64.4
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 5.3e-139 498.4 433 64.7
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 2.0e-138 496.5 431 64.5
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 2.6e-138 496.1 427 64.4
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 5.8e-138 495.0 420 65.5
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 4.9e-137 491.9 426 63.6
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 2.4e-136 489.6 435 62.8
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 2.4e-136 489.6 430 62.8
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 5.4e-136 488.4 453 61.8
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 9.3e-136 487.6 435 61.8
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 3.5e-135 485.7 425 63.1
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 4.6e-135 485.3 430 62.6
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 6.0e-135 485.0 430 62.1
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 1.0e-134 484.2 427 61.6
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 1.3e-134 483.8 425 62.8
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.3e-134 483.8 433 62.1
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 1.1e-133 480.7 435 62.1
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 1.1e-133 480.7 425 62.4
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 1.5e-133 480.3 435 62.8
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 3.3e-133 479.2 429 63.2
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 7.4e-133 478.0 452 59.7
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 1.6e-132 476.9 425 61.4
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 2.1e-132 476.5 430 60.2
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 2.8e-132 476.1 427 60.9
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 4.8e-132 475.3 425 61.2
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 8.1e-132 474.6 433 60.3
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 1.1e-131 474.2 425 61.2
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 1.1e-131 474.2 425 61.6
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 1.8e-131 473.4 425 61.2
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 1.8e-131 473.4 426 62.0
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 5.3e-131 471.9 425 60.0
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 3.4e-130 469.2 404 64.6
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 3.4e-130 469.2 430 59.3
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 9.9e-130 467.6 402 64.4
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 1.3e-129 467.2 427 62.1
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 1.3e-129 467.2 425 60.7
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 1.1e-128 464.2 428 59.6
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 1.1e-128 464.2 428 58.6
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.0e-126 457.6 385 64.2
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 3.0e-126 456.1 403 63.8
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 1.1e-125 454.1 428 57.9
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 1.1e-125 454.1 391 64.7
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 7.4e-125 451.4 450 58.0
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 3.7e-124 449.1 427 59.0
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.8e-123 446.8 436 58.0
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 5.8e-122 441.8 425 57.9
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.0e-118 431.0 449 55.2
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 1.4e-115 420.6 442 55.4
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 1.8e-115 420.2 378 62.4
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 1.0e-113 414.5 338 66.0
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 7.2e-112 408.3 342 64.9
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 6.1e-111 405.2 451 51.9
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 3.0e-110 402.9 380 58.9
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 1.8e-107 393.7 444 51.6
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 9.1e-107 391.3 431 52.0
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 2.0e-106 390.2 426 50.7
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.3e-105 387.5 431 52.2
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 1.6e-103 380.6 325 64.6
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 2.3e-102 376.7 288 70.8
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 4.8e-100 369.0 341 59.8
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 8.2e-100 368.2 335 60.9
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 3.6e-95 352.8 443 47.0
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 1.4e-94 350.9 299 64.9
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 6.3e-92 342.0 282 67.4
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 7.2e-88 328.6 374 51.3
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 7.2e-80 302.0 289 59.2
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 5.7e-77 292.4 347 47.8
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 1.8e-75 287.3 473 42.7
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 4.3e-64 249.6 434 39.2
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 3.7e-60 236.5 226 60.2
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 2.7e-58 230.3 449 35.2
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 1.1e-56 224.9 380 42.6
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 8.9e-54 215.3 187 63.1
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 1.1e-43 181.8 429 32.4
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 1.9e-32 144.4 450 31.3
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.6e-31 141.4 99 76.8
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 1.2e-26 125.2 372 34.1
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 1.6e-23 114.8 124 57.3
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 2.6e-21 107.5 80 67.5
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 1.9e-19 101.3 432 25.7
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 7.1e-19 99.4 407 24.8
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 5.1e-17 93.2 126 45.2
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 6.7e-17 92.8 72 66.7
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 2.4e-14 84.3 460 24.8
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 4.0e-14 83.6 86 52.3
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 6.9e-14 82.8 87 55.2
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 9.0e-14 82.4 78 56.4
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 1.8e-06 58.2 60 53.3


User provided reference genes

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