Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.3e-137 493.0 254 100.0
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 1.2e-64 250.8 132 97.7
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 6.3e-63 245.0 132 95.5
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.1e-62 244.2 132 95.5
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 1.1e-59 234.2 132 90.2
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 4.1e-54 215.7 132 84.1
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 6.6e-52 208.4 132 81.8
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 1.6e-50 203.8 133 79.7
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 8.0e-50 201.4 133 78.2
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 8.9e-49 198.0 133 76.7
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 1.2e-48 197.6 136 77.9
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 1.5e-48 197.2 130 78.5
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 1.5e-48 197.2 129 77.5
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 3.4e-48 196.1 131 79.4
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 3.4e-48 196.1 131 79.4
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 4.4e-48 195.7 134 76.9
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.3e-47 194.1 131 78.6
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 1.3e-47 194.1 131 78.6
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 1.7e-47 193.7 129 77.5
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 4.9e-47 192.2 130 76.2
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 8.3e-47 191.4 133 72.9
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 2.4e-46 189.9 131 77.1
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 2.4e-46 189.9 134 73.9
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 2.4e-46 189.9 133 73.7
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 3.2e-46 189.5 130 76.2
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 5.4e-46 188.7 133 75.9
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 7.0e-46 188.3 133 75.2
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 7.0e-46 188.3 133 74.4
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 9.2e-46 188.0 133 74.4
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 1.2e-45 187.6 133 75.2
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 1.6e-45 187.2 134 74.6
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 1.6e-45 187.2 134 74.6
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 1.6e-45 187.2 134 75.4
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 4.6e-45 185.7 133 74.4
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 7.8e-45 184.9 132 70.5
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 1.0e-44 184.5 133 73.7
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 1.7e-44 183.7 137 73.0
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 2.3e-44 183.3 133 72.2
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 3.9e-44 182.6 140 71.4
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 8.6e-44 181.4 141 70.2
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 1.1e-43 181.0 140 70.7
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.1e-43 181.0 138 71.7
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.1e-43 181.0 141 69.5
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 1.5e-43 180.6 134 72.4
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 2.5e-43 179.9 134 72.4
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 3.3e-43 179.5 132 68.9
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 3.3e-43 179.5 141 71.6
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 4.3e-43 179.1 128 70.3
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 4.3e-43 179.1 140 72.1
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 4.3e-43 179.1 137 73.0
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 7.3e-43 178.3 139 68.3
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 7.3e-43 178.3 132 68.9
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 7.3e-43 178.3 141 68.8
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 1.2e-42 177.6 134 70.9
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 6.2e-42 175.3 156 65.4
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 1.4e-41 174.1 138 67.4
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 1.8e-41 173.7 136 66.9
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 3.1e-41 172.9 129 70.5
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 3.1e-41 172.9 138 66.7
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 4.0e-41 172.6 133 69.2
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 5.2e-41 172.2 136 66.2
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 5.2e-41 172.2 138 67.4
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 6.8e-41 171.8 141 69.5
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 6.8e-41 171.8 138 66.7
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 8.9e-41 171.4 129 68.2
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 8.9e-41 171.4 135 72.6
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 8.9e-41 171.4 135 69.6
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 2.0e-40 170.2 135 69.6
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 2.6e-40 169.9 141 68.1
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 3.4e-40 169.5 130 66.9
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 3.4e-40 169.5 130 66.9
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 3.4e-40 169.5 130 66.9
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 3.4e-40 169.5 129 69.0
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 4.4e-40 169.1 132 70.5
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 7.5e-40 168.3 129 68.2
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 9.8e-40 167.9 149 63.8
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 1.3e-39 167.5 129 66.7
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 1.3e-39 167.5 129 67.4
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 1.3e-39 167.5 129 67.4
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 1.3e-39 167.5 136 64.7
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 1.7e-39 167.2 129 66.7
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 3.7e-39 166.0 129 66.7
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 3.7e-39 166.0 132 68.9
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 3.7e-39 166.0 138 66.7
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 6.4e-39 165.2 129 66.7
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 8.3e-39 164.9 129 66.7
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 8.3e-39 164.9 129 66.7
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 1.1e-38 164.5 142 64.1
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 5.4e-38 162.2 134 67.9
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 9.2e-38 161.4 129 66.7
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 9.2e-38 161.4 135 65.9
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 7.8e-37 158.3 130 63.8
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 7.8e-37 158.3 130 63.8
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 1.0e-36 157.9 130 63.8
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 1.0e-36 157.9 138 66.7
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 1.7e-36 157.1 129 65.1
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 2.3e-36 156.8 139 62.6
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 3.9e-36 156.0 130 63.1
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 1.1e-35 154.5 134 66.4
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 1.5e-35 154.1 129 64.3
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 1.9e-35 153.7 131 62.6
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 3.3e-35 152.9 129 64.3
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 7.3e-35 151.8 132 64.4
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 7.3e-35 151.8 121 68.6
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 6.2e-34 148.7 126 59.5
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 2.6e-32 143.3 129 61.2
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 9.9e-32 141.4 129 61.2
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 4.9e-31 139.0 147 59.2
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 6.4e-31 138.7 129 59.7
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 1.9e-30 137.1 132 59.8
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 7.1e-30 135.2 132 59.8
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 3.5e-29 132.9 150 54.0
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 1.5e-27 127.5 110 61.8
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 2.4e-25 120.2 132 56.1
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 2.4e-25 120.2 89 68.5
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 2.4e-25 120.2 132 53.8
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 1.1e-22 111.3 72 75.0
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 1.1e-22 111.3 115 56.5
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 7.1e-22 108.6 76 73.7
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 1.7e-20 104.0 130 54.6
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 1.6e-10 70.9 158 34.2
Potri.001G206032 Populus trichocarpa HOM05D005104 ORTHO05D006614 2.8e-10 70.1 61 62.3
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 2.6e-08 63.5 63 55.6
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 1.7e-07 60.8 61 55.7
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 6.4e-07 58.9 57 54.4
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 9.3e-06 55.1 65 52.3


User provided reference genes

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