Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G3347 Fragaria x ananassa HOM05D000665 ORTHO05D016313 1.0e-38 162.9 82 100.0
FvH4_2g13781 Fragaria vesca HOM05D000665 ORTHO05D000140 4.9e-33 144.1 98 78.6
FvH4_4g15662 Fragaria vesca HOM05D000665 ORTHO05D000140 1.4e-27 125.9 92 75.0
FAN08G1891 Fragaria x ananassa HOM05D013617 ORTHO05D016313 1.1e-19 99.8 82 67.1
FAN23G1453 Fragaria x ananassa HOM05D013617 ORTHO05D016313 3.1e-19 98.2 75 70.7
Prupe.1G245200 Prunus persica HOM05D000665 ORTHO05D000140 3.4e-18 94.7 84 57.1
FAN26G1049 Fragaria x ananassa HOM05D000665 ORTHO05D000140 5.8e-18 94.0 87 55.2
Prupe.4G256700 Prunus persica HOM05D000665 ORTHO05D000140 5.8e-18 94.0 86 55.8
Prupe.6G167700 Prunus persica HOM05D000665 ORTHO05D000140 5.8e-18 94.0 84 57.1
FAN24G3328 Fragaria x ananassa HOM05D000665 ORTHO05D000140 1.3e-17 92.8 70 62.9
FAN27G2455 Fragaria x ananassa HOM05D001671 ORTHO05D000140 3.8e-17 91.3 77 67.5
Glyma.02G156600 Glycine max HOM05D000665 ORTHO05D000140 4.2e-16 87.8 93 45.2
Glyma.05G097200 Glycine max HOM05D000665 ORTHO05D000140 2.7e-15 85.1 93 44.1
Glyma.18G141600 Glycine max HOM05D000665 ORTHO05D000140 3.5e-15 84.7 93 44.1
RcHm_v2.0_Chr1g0330381 Rosa chinensis HOM05D000665 ORTHO05D000140 3.5e-15 84.7 77 61.0
Glyma.16G081300 Glycine max HOM05D000665 ORTHO05D000140 4.6e-15 84.3 93 45.2
TPR.G40119 Trifolium pratense HOM05D000665 ORTHO05D000140 7.9e-15 83.6 103 42.7
Glyma.08G025200 Glycine max HOM05D000665 ORTHO05D000140 1.3e-14 82.8 84 48.8
Glyma.09G072900 Glycine max HOM05D000665 ORTHO05D000140 1.3e-14 82.8 84 48.8
Medtr7g102860 Medicago truncatula HOM05D000665 ORTHO05D000140 2.3e-14 82.0 103 41.7
Glyma.03G069900 Glycine max HOM05D000665 ORTHO05D000140 3.9e-14 81.3 93 41.9
Glyma.11G208100 Glycine max HOM05D000665 ORTHO05D000140 5.1e-14 80.9 84 47.6
COL.COLO4_11921 Corchorus olitorius HOM05D000665 ORTHO05D000140 8.7e-14 80.1 86 45.3
COL.COLO4_35899 Corchorus olitorius HOM05D000665 ORTHO05D000140 8.7e-14 80.1 86 45.3
Lj5g0014380 Lotus japonicus HOM05D000665 ORTHO05D000140 8.7e-14 80.1 87 42.5
Glyma.20G028300 Glycine max HOM05D000665 ORTHO05D000140 1.1e-13 79.7 79 50.6
Lj1g0005320 Lotus japonicus HOM05D000665 ORTHO05D000140 1.9e-13 79.0 87 41.4
Lj1g0011582 Lotus japonicus HOM05D000665 ORTHO05D000140 1.9e-13 79.0 87 41.4
Lj6g0001109 Lotus japonicus HOM05D000665 ORTHO05D000140 4.3e-13 77.8 87 41.4
Lj2g0022922 Lotus japonicus HOM05D000665 ORTHO05D000140 7.4e-13 77.0 87 41.4
Prupe.7G027800 Prunus persica HOM05D000665 ORTHO05D000140 1.6e-12 75.9 75 52.0
COL.COLO4_13013 Corchorus olitorius HOM05D000665 ORTHO05D000140 2.8e-12 75.1 86 43.0
COL.COLO4_16082 Corchorus olitorius HOM05D000665 ORTHO05D000140 2.8e-12 75.1 84 44.0
FAN19G1575 Fragaria x ananassa HOM05D000665 ORTHO05D000140 2.8e-12 75.1 60 68.3
COL.COLO4_07541 Corchorus olitorius HOM05D000665 ORTHO05D000140 3.1e-11 71.6 77 46.8
Prupe.5G014400 Prunus persica HOM05D000665 ORTHO05D000140 4.0e-11 71.2 72 54.2
FAN05G1512 Fragaria x ananassa HOM05D013617 ORTHO05D016313 5.3e-11 70.9 80 52.5
Glyma.11G158600 Glycine max HOM05D000665 ORTHO05D000140 6.9e-11 70.5 75 48.0
Glyma.05G132400 Glycine max HOM05D000665 ORTHO05D000140 9.0e-11 70.1 74 45.9
Glyma.08G287150 Glycine max HOM05D000665 ORTHO05D000140 9.0e-11 70.1 74 45.9
FAN08G1155 Fragaria x ananassa HOM05D013617 ORTHO05D016313 2.0e-10 68.9 69 62.3
Glyma.04G130400 Glycine max HOM05D000665 ORTHO05D000140 2.6e-10 68.6 75 48.0
Glyma.19G070100 Glycine max HOM05D000665 ORTHO05D000140 2.6e-10 68.6 74 44.6
Glyma.17G193900 Glycine max HOM05D000665 ORTHO05D000140 3.4e-10 68.2 75 46.7
Prupe.5G014200 Prunus persica HOM05D000665 ORTHO05D000140 4.5e-10 67.8 44 68.2
Glyma.08G267100 Glycine max HOM05D000665 ORTHO05D000140 5.8e-10 67.4 74 44.6
Glyma.09G131700 Glycine max HOM05D000665 ORTHO05D000140 5.8e-10 67.4 75 46.7
FvH4_1g20120 Fragaria vesca HOM05D000665 ORTHO05D000140 1.0e-09 66.6 34 91.2
Nn6g33669 Nelumbo nucifera HOM05D000665 ORTHO05D000140 1.3e-09 66.2 100 38.0
Prupe.5G049300 Prunus persica HOM05D000665 ORTHO05D000140 1.7e-09 65.9 79 46.8
FAN27G0927 Fragaria x ananassa HOM05D000665 ORTHO05D000140 5.0e-09 64.3 48 62.5
RcHm_v2.0_Chr7g0231381 Rosa chinensis HOM05D000665 ORTHO05D000140 6.5e-09 63.9 94 37.2
Gorai.009G076900 Gossypium raimondii HOM05D000665 ORTHO05D000140 8.4e-09 63.5 73 38.4
Duzib168G0826 Durio zibethinus HOM05D000665 ORTHO05D000140 5.5e-08 60.8 87 35.6
FAN26G0684 Fragaria x ananassa HOM05D013617 ORTHO05D016313 5.5e-08 60.8 34 82.4
Glyma.06G254400 Glycine max HOM05D000665 ORTHO05D000140 9.3e-08 60.1 75 41.3
Medtr7g061400 Medicago truncatula HOM05D000665 ORTHO05D000140 9.3e-08 60.1 75 42.7
SGA_v2.0_scaffold152G36847 Striga asiatica HOM05D000665 ORTHO05D000140 1.6e-07 59.3 85 38.8
Nn2g14680 Nelumbo nucifera HOM05D000665 ORTHO05D000140 2.1e-07 58.9 94 31.9
Haze_23288 Corylus avellana HOM05D000665 ORTHO05D000140 6.1e-07 57.4 81 33.3
Haze_23291 Corylus avellana HOM05D000665 ORTHO05D000140 6.1e-07 57.4 81 33.3
COL.COLO4_06628 Corchorus olitorius HOM05D000665 ORTHO05D000140 1.0e-06 56.6 87 33.3
Gohir.D05G075500 Gossypium hirsutum HOM05D000665 ORTHO05D000140 1.0e-06 56.6 85 31.8
Lj1g0000640 Lotus japonicus HOM05D000665 ORTHO05D000140 1.0e-06 56.6 57 45.6
TAR526G0001 Trochodendron aralioides HOM05D000665 ORTHO05D000140 1.0e-06 56.6 93 31.2
Dinv29316 Davidia involucrata HOM05D000001 ORTHO05D000003 1.3e-06 56.2 85 37.6
Glyma.08G295300 Glycine max HOM05D000665 ORTHO05D000140 1.3e-06 56.2 71 43.7
TAR629G1231 Trochodendron aralioides HOM05D000665 ORTHO05D000140 1.3e-06 56.2 47 51.1
Psat1g190200 Pisum sativum HOM05D000665 ORTHO05D000140 1.8e-06 55.8 61 44.3
Lj7A675G36 Lonicera japonica HOM05D000665 ORTHO05D000140 2.3e-06 55.5 92 30.4
QL01p016365 Quercus lobata HOM05D000665 ORTHO05D000140 2.3e-06 55.5 81 30.9
Thecc.09G253400 Theobroma cacao HOM05D000665 ORTHO05D000140 2.3e-06 55.5 87 33.3
Lalb_Chr15g0080181 Lupinus albus HOM05D000665 ORTHO05D000140 3.9e-06 54.7 80 36.2
PSO541G0575 Papaver somniferum HOM05D000665 ORTHO05D000140 5.1e-06 54.3 91 28.6
Phvul.006G016600 Phaseolus vulgaris HOM05D000665 ORTHO05D000140 5.1e-06 54.3 80 32.5
Dinv13787 Davidia involucrata HOM05D000034 ORTHO05D000037 6.7e-06 53.9 42 52.4
FAN20G2650 Fragaria x ananassa HOM05D013617 ORTHO05D016313 6.7e-06 53.9 29 86.2
Lj6g0024114 Lotus japonicus HOM05D000665 ORTHO05D000140 6.7e-06 53.9 80 32.5
Lj4C833G3 Lonicera japonica HOM05D000665 ORTHO05D000140 8.7e-06 53.5 81 34.6
RcHm_v2.0_Chr2g0139691 Rosa chinensis HOM05D000665 ORTHO05D000140 8.7e-06 53.5 93 30.1


User provided reference genes

Program Settings