Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 3.7e-51 204.5 99 100.0
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.2e-49 199.5 99 97.0
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 1.6e-49 199.1 99 98.0
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 4.5e-49 197.6 99 97.0
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 1.6e-41 172.6 99 86.9
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 1.3e-40 169.5 99 86.9
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 1.1e-34 149.8 97 78.4
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 8.6e-32 140.2 100 71.0
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 4.7e-30 134.4 79 78.5
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 1.0e-29 133.3 95 67.4
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 1.4e-29 132.9 79 77.2
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 3.0e-29 131.7 76 77.6
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 8.9e-29 130.2 100 69.0
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 1.5e-28 129.4 80 75.0
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 2.6e-28 128.6 91 63.7
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 4.4e-28 127.9 77 76.6
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 5.7e-28 127.5 77 75.3
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 5.7e-28 127.5 91 63.7
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 7.5e-28 127.1 81 70.4
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 9.8e-28 126.7 96 64.6
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 1.3e-27 126.3 97 66.0
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 2.2e-27 125.6 76 77.6
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 2.2e-27 125.6 99 66.7
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 2.2e-27 125.6 99 66.7
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 3.7e-27 124.8 89 67.4
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 4.9e-27 124.4 137 51.1
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 6.4e-27 124.0 86 69.8
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 8.3e-27 123.6 77 72.7
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 8.3e-27 123.6 77 71.4
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 8.3e-27 123.6 93 64.5
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 1.1e-26 123.2 98 60.2
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 1.1e-26 123.2 86 66.3
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 1.1e-26 123.2 80 71.2
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 1.1e-26 123.2 91 62.6
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 1.1e-26 123.2 69 81.2
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 1.4e-26 122.9 77 72.7
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 1.4e-26 122.9 77 72.7
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 1.4e-26 122.9 76 75.0
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 1.4e-26 122.9 76 75.0
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 1.4e-26 122.9 76 75.0
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 1.4e-26 122.9 69 81.2
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 1.4e-26 122.9 76 72.4
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 1.8e-26 122.5 76 75.0
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 3.2e-26 121.7 97 63.9
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 4.1e-26 121.3 77 72.7
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 5.4e-26 120.9 76 73.7
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 5.4e-26 120.9 79 73.4
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 7.0e-26 120.6 73 72.6
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 7.0e-26 120.6 69 78.3
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 9.2e-26 120.2 88 64.8
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 9.2e-26 120.2 74 71.6
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 9.2e-26 120.2 74 71.6
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 1.2e-25 119.8 77 71.4
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 1.2e-25 119.8 61 85.2
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 2.0e-25 119.0 86 65.1
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 2.0e-25 119.0 98 60.2
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 2.0e-25 119.0 83 69.9
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 2.7e-25 118.6 92 59.8
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 3.5e-25 118.2 80 68.8
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 3.5e-25 118.2 95 60.0
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 4.6e-25 117.9 95 60.0
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 5.9e-25 117.5 77 68.8
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 5.9e-25 117.5 77 68.8
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 5.9e-25 117.5 77 68.8
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 1.0e-24 116.7 76 71.1
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 1.0e-24 116.7 79 72.2
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 1.0e-24 116.7 83 66.3
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 1.0e-24 116.7 77 68.8
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 1.3e-24 116.3 80 68.8
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 1.3e-24 116.3 80 70.0
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 1.3e-24 116.3 80 70.0
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 1.3e-24 116.3 72 72.2
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 1.7e-24 115.9 76 69.7
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 1.7e-24 115.9 92 58.7
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 3.0e-24 115.2 80 67.5
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 3.0e-24 115.2 80 67.5
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 5.0e-24 114.4 83 66.3
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 6.6e-24 114.0 79 65.8
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 1.5e-23 112.8 80 66.2
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 2.5e-23 112.1 75 70.7
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 1.6e-22 109.4 62 75.8
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 6.2e-22 107.5 91 53.8
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 8.0e-22 107.1 69 71.0
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 3.1e-21 105.1 72 66.7
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 5.2e-21 104.4 71 67.6
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 5.2e-21 104.4 76 61.8
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 2.6e-20 102.1 62 80.6
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 2.6e-20 102.1 101 51.5
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 3.4e-20 101.7 61 77.0
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 3.4e-20 101.7 61 77.0
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 1.3e-19 99.8 62 71.0
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 8.3e-19 97.1 61 73.8
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 4.1e-18 94.7 66 60.6
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 5.4e-18 94.4 60 70.0
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 1.6e-17 92.8 54 68.5
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 7.8e-17 90.5 73 53.4
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 1.3e-16 89.7 47 80.9
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 1.7e-16 89.4 102 47.1
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 1.9e-15 85.9 74 50.0
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 3.3e-15 85.1 59 62.7
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 3.3e-15 85.1 59 62.7
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 3.6e-14 81.6 62 59.7
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 4.7e-14 81.3 65 58.5
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 1.1e-13 80.1 67 55.2
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 5.2e-13 77.8 61 59.0
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 6.8e-13 77.4 48 70.8
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 2.7e-09 65.5 65 43.1
Peaxi162Scf00070g00023 Petunia axillaris HOM05D007141 ORTHO05D008975 4.6e-09 64.7 43 67.4
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 3.0e-08 62.0 42 54.8
Atru.BG.143.p Acer truncatum HOM05D007141 ORTHO05D008975 1.2e-06 56.6 28 82.1
Atru.BG.284.p Acer truncatum HOM05D007141 ORTHO05D008975 2.8e-06 55.5 28 82.1


User provided reference genes

Program Settings