Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G3212 Fragaria x ananassa HOM05D000333 ORTHO05D000190 2.8e-177 625.2 311 100.0
FAN27G0298 Fragaria x ananassa HOM05D000333 ORTHO05D000190 2.4e-112 409.5 324 69.1
FvH4_2g19520 Fragaria vesca HOM05D000333 ORTHO05D000190 1.3e-94 350.5 170 100.0
RcHm_v2.0_Chr6g0285241 Rosa chinensis HOM05D000333 ORTHO05D000190 1.1e-77 294.3 171 86.0
Prupe.8G206700 Prunus persica HOM05D000333 ORTHO05D000190 1.4e-51 207.6 180 68.3
MD05G1179400 Malus domestica HOM05D000333 ORTHO05D000190 1.4e-48 197.6 176 68.2
MD10G1169000 Malus domestica HOM05D000333 ORTHO05D000190 1.3e-46 191.0 176 67.6
QL09p044528 Quercus lobata HOM05D000333 ORTHO05D000190 3.7e-41 172.9 172 60.5
CiPaw.04G107300 Carya illinoinensis HOM05D000333 ORTHO05D000190 1.6e-39 167.5 173 58.4
Cpa.g.sc8.182 Carica papaya HOM05D000333 ORTHO05D000190 3.3e-37 159.8 174 54.0
Potri.014G178200 Populus trichocarpa HOM05D000333 ORTHO05D000190 3.3e-37 159.8 171 53.2
Manes.12G042600 Manihot esculenta HOM05D000333 ORTHO05D000190 5.6e-37 159.1 173 52.6
CANSAT01G2448 Cannabis sativa HOM05D000333 ORTHO05D000190 3.6e-36 156.4 191 53.4
GSVIVG01028555001 Vitis vinifera HOM05D000333 ORTHO05D000190 3.1e-35 153.3 172 51.7
Duzib211G0144 Durio zibethinus HOM05D000333 ORTHO05D000190 6.8e-35 152.1 175 51.4
Cfa002541 Carpinus fangiana HOM05D000333 ORTHO05D000190 8.9e-35 151.8 173 56.6
Manes.13G044000 Manihot esculenta HOM05D000333 ORTHO05D000190 1.2e-34 151.4 173 50.9
Duzib138G0749 Durio zibethinus HOM05D000333 ORTHO05D000190 1.5e-34 151.0 173 53.2
Potri.002G238700 Populus trichocarpa HOM05D000333 ORTHO05D000190 2.6e-34 150.2 175 51.4
COL.COLO4_04694 Corchorus olitorius HOM05D001336 ORTHO05D001211 1.7e-33 147.5 179 53.6
Sabra02G0181800 Salix brachista HOM05D000333 ORTHO05D000190 9.3e-32 141.7 173 48.0
Glyma.08G356600 Glycine max HOM05D000333 ORTHO05D000190 1.6e-31 141.0 170 51.8
Glyma.18G174500 Glycine max HOM05D000333 ORTHO05D000190 2.1e-31 140.6 170 50.0
vmacro02742 Vaccinium macrocarpon HOM05D000333 ORTHO05D000190 3.5e-31 139.8 170 50.6
DCAR_018549 Daucus carota HOM05D000333 ORTHO05D000190 1.0e-30 138.3 171 50.9
Sabra14G0136500 Salix brachista HOM05D000333 ORTHO05D000190 1.3e-30 137.9 265 41.5
DCAR_012630 Daucus carota HOM05D000333 ORTHO05D000190 1.7e-30 137.5 173 52.0
Actinidia37579 Actinidia chinensis HOM05D001336 ORTHO05D001211 1.9e-29 134.0 170 49.4
TWI75G0149 Tripterygium wilfordii HOM05D000333 ORTHO05D000190 1.9e-29 134.0 171 48.0
Thecc.01G229500 Theobroma cacao HOM05D000333 ORTHO05D000190 7.3e-29 132.1 172 52.9
Gohir.A07G201600 Gossypium hirsutum HOM05D000333 ORTHO05D000190 1.6e-28 131.0 176 48.3
Hma1.2p1_1061F.1_g253270 Hydrangea macrophylla HOM05D000333 ORTHO05D000190 4.8e-28 129.4 170 47.1
TAR633G0837 Trochodendron aralioides HOM05D000333 ORTHO05D000190 4.8e-28 129.4 170 50.0
TWI31G1277 Tripterygium wilfordii HOM05D000333 ORTHO05D000190 8.1e-28 128.6 172 47.7
Gorai.001G234500 Gossypium raimondii HOM05D000333 ORTHO05D000190 1.1e-27 128.3 177 47.5
Phvul.008G124366 Phaseolus vulgaris HOM05D000333 ORTHO05D000190 1.8e-27 127.5 171 49.1
Oeu017349.1 Olea europaea HOM05D000333 ORTHO05D000190 2.4e-27 127.1 172 48.3
Gohir.D07G207900 Gossypium hirsutum HOM05D000333 ORTHO05D000190 3.1e-27 126.7 175 45.7
MSTRG.18377 Avicennia marina HOM05D000333 ORTHO05D000190 9.0e-27 125.2 174 45.4
TAR228G0003 Trochodendron aralioides HOM05D001336 ORTHO05D001211 2.0e-26 124.0 170 47.1
Nn1g03135 Nelumbo nucifera HOM05D000333 ORTHO05D000190 7.6e-26 122.1 179 45.8
Oeu015459.1 Olea europaea HOM05D000333 ORTHO05D000190 1.3e-25 121.3 170 47.1
Nitab4.5_0000846g0050 Nicotiana tabacum HOM05D001336 ORTHO05D001211 3.8e-25 119.8 185 46.5
VMungo1383G2917 Vigna mungo HOM05D000333 ORTHO05D000190 5.4e-24 115.9 148 50.0
Peaxi162Scf00052g00092 Petunia axillaris HOM05D000333 ORTHO05D000190 7.1e-24 115.5 181 46.4
PSO104G0122 Papaver somniferum HOM05D000333 ORTHO05D000190 1.6e-23 114.4 203 42.9
PSO421G0439 Papaver somniferum HOM05D000333 ORTHO05D000190 6.0e-23 112.5 201 42.3
Eucgr.H00811 Eucalyptus grandis HOM05D000333 ORTHO05D000190 1.3e-22 111.3 178 48.9
Ciclev10024546m.g Citrus clementina HOM05D000333 ORTHO05D000190 1.7e-22 110.9 189 45.5
PSO421G0152 Papaver somniferum HOM05D000333 ORTHO05D000190 3.0e-22 110.2 203 41.4
AUR62031825 Chenopodium quinoa HOM05D000333 ORTHO05D000190 8.1e-20 102.1 180 42.2
ClCG07G001730 Citrullus lanatus HOM05D000333 ORTHO05D000190 8.1e-20 102.1 174 43.7
Lalb_Chr01g0022461 Lupinus albus HOM05D000333 ORTHO05D000190 8.1e-20 102.1 92 58.7
Atru.chr5.1981 Acer truncatum HOM05D000333 ORTHO05D000190 2.4e-19 100.5 183 43.7
Lsat_1_v5_gn_5_179601 Lactuca sativa HOM05D000333 ORTHO05D000190 9.0e-19 98.6 171 41.5
PSO104G0174 Papaver somniferum HOM05D000333 ORTHO05D000190 1.2e-18 98.2 199 39.2
EL10Ac7g17799 Beta vulgaris HOM05D000333 ORTHO05D000190 2.6e-18 97.1 180 37.8
Migut.N02256 Erythranthe guttata HOM05D000333 ORTHO05D000190 2.6e-18 97.1 198 39.9
Rhsim01G0257900 Rhododendron simsii HOM05D000333 ORTHO05D000190 3.4e-18 96.7 173 40.5
Aqoxy2G03794 Aquilegia oxysepala HOM05D000333 ORTHO05D000190 1.3e-17 94.7 186 39.8
Sopen09g024930 Solanum pennellii HOM05D000333 ORTHO05D000190 1.3e-17 94.7 154 43.5
AUR62008883 Chenopodium quinoa HOM05D000333 ORTHO05D000190 2.2e-17 94.0 185 40.5
HanXRQChr01g0014731 Helianthus annuus HOM05D000333 ORTHO05D000190 6.4e-17 92.4 170 40.0
PGSC0003DMG400015816 Solanum tuberosum HOM05D000333 ORTHO05D000190 3.2e-16 90.1 156 43.6
MELO3C012789.2 Cucumis melo HOM05D000333 ORTHO05D000190 4.2e-16 89.7 175 41.1
MBI10_g43787_MAGBIO Magnolia biondii HOM05D000333 ORTHO05D000190 4.2e-16 89.7 173 38.7
Sed0006952 Sechium edule HOM05D000333 ORTHO05D000190 2.7e-15 87.0 174 39.1
ATR0787G074 Amborella trichopoda HOM05D000333 ORTHO05D000190 3.0e-14 83.6 172 40.7
Gohir.D08G211650 Gossypium hirsutum HOM05D000333 ORTHO05D000190 3.0e-14 83.6 171 39.8
CDE06G2234 Ceratophyllum demersum HOM05D000333 ORTHO05D000190 5.1e-14 82.8 159 37.7
Migut.D00516 Erythranthe guttata HOM05D000333 ORTHO05D000190 5.1e-14 82.8 179 39.1
CAN.G546.50 Capsicum annuum HOM05D000333 ORTHO05D000190 1.9e-13 80.9 196 39.3
CDE04G0358 Ceratophyllum demersum HOM05D000333 ORTHO05D000190 1.9e-13 80.9 159 39.6
PGR083G1763 Punica granatum HOM05D000333 ORTHO05D000190 1.9e-13 80.9 177 37.9
Gohir.A08G193850 Gossypium hirsutum HOM05D000333 ORTHO05D000190 7.4e-13 79.0 171 39.2
Gorai.004G224900 Gossypium raimondii HOM05D000333 ORTHO05D000190 7.4e-13 79.0 171 38.6
Sc24g0003590 Simmondsia chinensis HOM05D000333 ORTHO05D000190 7.4e-13 79.0 108 45.4
MSTRG.21436 Avicennia marina HOM05D000333 ORTHO05D000190 1.3e-12 78.2 119 41.2
CsaV3_3G028730 Cucumis sativus L. HOM05D000333 ORTHO05D000190 3.7e-12 76.6 80 58.8
TAR636G0361 Trochodendron aralioides HOM05D001336 ORTHO05D001211 5.3e-11 72.8 171 35.1
Sed0004484 Sechium edule HOM05D000333 ORTHO05D000190 2.9e-09 67.0 173 33.5
SGA_v2.0_scaffold8G04654 Striga asiatica HOM05D000333 ORTHO05D000190 2.9e-09 67.0 111 36.9
THA.LOC104818940 Tarenaya hassleriana HOM05D000333 ORTHO05D000190 1.1e-08 65.1 178 37.1
PSO729G0083 Papaver somniferum HOM05D000333 ORTHO05D000190 1.9e-08 64.3 197 33.5
SGA_v2.0_scaffold1G00711 Striga asiatica HOM05D000333 ORTHO05D000190 1.9e-08 64.3 107 39.3
SGA_v2.0_scaffold3G01582 Striga asiatica HOM05D000333 ORTHO05D000190 6.0e-07 59.3 170 31.2
Sp2g19280 Schrenkiella parvula HOM05D000333 ORTHO05D000190 1.0e-06 58.5 60 58.3
AT5G48890 Arabidopsis thaliana HOM05D000333 ORTHO05D000190 1.8e-06 57.8 56 58.9
Aa31sc98G60 Aethionema arabicum HOM05D000333 ORTHO05D000190 3.9e-06 56.6 60 58.3
A09p04670 Brassica napus HOM05D000333 ORTHO05D000190 3.9e-06 56.6 86 47.7
Carub.0008s0861 Capsella rubella HOM05D000333 ORTHO05D000190 3.9e-06 56.6 56 57.1
SEGI_37376 Sequoiadendron giganteum HOM05D000333 ORTHO05D000190 3.9e-06 56.6 72 45.8
CSS0027388 Camellia sinensis var. sinensis HOM05D000333 ORTHO05D000190 8.7e-06 55.5 137 38.7


User provided reference genes

Program Settings