Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G3155 Fragaria x ananassa HOM05D022571 ORTHO05D029580 5.7e-104 380.9 197 100.0
FvH4_2g07040 Fragaria vesca HOM05D022571 ORTHO05D029580 1.7e-103 379.4 197 99.5
FAN15G1463 Fragaria x ananassa HOM05D022571 ORTHO05D029580 7.8e-101 370.5 197 97.5
FAN27G0090 Fragaria x ananassa HOM05D022571 ORTHO05D029580 1.1e-99 366.7 197 97.0
RcHm_v2.0_Chr6g0275631 Rosa chinensis HOM05D007797 ORTHO05D009741 7.7e-24 114.8 104 63.5
FvH4_2g13880 Fragaria vesca HOM05D007797 ORTHO05D009741 3.9e-12 75.9 103 47.6
FAN27G1170 Fragaria x ananassa HOM05D007797 ORTHO05D009741 8.8e-12 74.7 103 47.6
FAN15G0457 Fragaria x ananassa HOM05D007797 ORTHO05D009741 2.0e-11 73.6 103 46.6
MD14G1212100 Malus domestica HOM05D000142 ORTHO05D000124 3.3e-11 72.8 118 42.4
RcHm_v2.0_Chr6g0257981 Rosa chinensis HOM05D022571 ORTHO05D010624 7.4e-11 71.6 54 74.1
Prupe.5G205300 Prunus persica HOM05D000142 ORTHO05D000124 6.3e-10 68.6 118 39.8
EL10Ac1g02199 Beta vulgaris HOM05D005794 ORTHO05D006814 2.6e-08 63.2 59 52.5
Phvul.003G184700 Phaseolus vulgaris HOM05D000142 ORTHO05D000124 7.7e-08 61.6 117 39.3
Glyma.17G078400 Glycine max HOM05D000142 ORTHO05D000124 1.3e-07 60.8 117 39.3
SHI15111 Sapria himalayana HOM05D005794 ORTHO05D006814 1.7e-07 60.5 55 54.5
MSTRG.25414 Avicennia marina HOM05D009845 ORTHO05D010624 2.9e-07 59.7 59 49.2
SHI35300 Sapria himalayana HOM05D005794 ORTHO05D006814 2.9e-07 59.7 62 50.0
SHI48376 Sapria himalayana HOM05D005794 ORTHO05D006814 2.9e-07 59.7 62 50.0
SHI37163 Sapria himalayana HOM05D005794 ORTHO05D006814 3.8e-07 59.3 62 48.4
CANSAT16G0049 Cannabis sativa HOM05D009845 ORTHO05D010624 5.0e-07 58.9 60 50.0
SHI44549 Sapria himalayana HOM05D005794 ORTHO05D006814 6.5e-07 58.5 62 50.0
SHI50742 Sapria himalayana HOM05D005794 ORTHO05D006814 8.5e-07 58.2 62 48.4
CsaV3_1G002940 Cucumis sativus L. HOM05D000142 ORTHO05D000124 1.1e-06 57.8 118 36.4
Lalb_Chr08g0236141 Lupinus albus HOM05D009845 ORTHO05D010624 1.5e-06 57.4 50 60.0
Lalb_Chr23g0273071 Lupinus albus HOM05D009845 ORTHO05D010624 1.5e-06 57.4 50 60.0
MELO3C017226.2 Cucumis melo HOM05D000142 ORTHO05D000124 1.9e-06 57.0 118 36.4
Glyma.05G020900 Glycine max HOM05D000142 ORTHO05D000124 3.2e-06 56.2 143 35.0
Lalb_Chr00c24g0406721 Lupinus albus HOM05D005794 ORTHO05D006814 4.2e-06 55.8 59 45.8
Potri.004G049600 Populus trichocarpa HOM05D009845 ORTHO05D010624 4.2e-06 55.8 59 45.8
Sabra04G0031300 Salix brachista HOM05D009845 ORTHO05D010624 5.5e-06 55.5 59 45.8
Cpa.g.sc94.58 Carica papaya HOM05D000142 ORTHO05D000124 7.2e-06 55.1 115 37.4
Oeu033677.1 Olea europaea HOM05D009845 ORTHO05D010624 7.2e-06 55.1 59 45.8


User provided reference genes

Program Settings