Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 4.8e-196 687.6 331 100.0
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.6e-191 672.5 327 98.5
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.4e-190 669.5 327 98.2
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 1.3e-185 652.9 327 95.7
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 2.2e-180 635.6 324 94.4
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 1.2e-173 613.2 331 86.1
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 1.0e-169 600.1 327 85.9
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 2.1e-167 592.4 327 83.5
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 6.8e-166 587.4 327 83.8
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 1.1e-163 580.1 327 81.3
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 3.2e-163 578.6 326 82.8
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 5.4e-163 577.8 331 80.7
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 1.6e-162 576.2 327 81.7
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 2.7e-162 575.5 331 80.4
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 7.8e-162 573.9 328 80.8
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 7.8e-162 573.9 327 81.0
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 1.3e-161 573.2 327 80.4
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 2.9e-161 572.0 327 80.7
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 3.9e-161 571.6 327 81.7
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 1.1e-160 570.1 327 80.7
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.5e-160 569.7 327 79.8
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 2.5e-160 568.9 331 78.2
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 2.5e-160 568.9 328 80.5
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 3.3e-160 568.5 327 81.7
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 4.3e-160 568.2 318 83.0
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 4.3e-160 568.2 318 83.0
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 1.2e-159 566.6 331 77.9
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 2.8e-159 565.5 321 82.6
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 2.3e-158 562.4 331 79.5
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 8.9e-158 560.5 327 78.0
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 1.2e-157 560.1 327 78.6
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 2.0e-157 559.3 328 78.4
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 3.4e-157 558.5 327 78.6
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 3.4e-157 558.5 327 79.5
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 7.5e-157 557.4 327 77.4
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.3e-156 556.6 329 79.0
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 3.7e-156 555.1 327 78.6
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 3.7e-156 555.1 327 78.9
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 6.4e-156 554.3 326 78.5
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 1.2e-154 550.1 326 77.0
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 1.2e-154 550.1 327 78.6
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.2e-154 550.1 327 77.7
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 2.0e-154 549.3 327 76.8
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 2.0e-154 549.3 340 78.8
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 2.7e-154 548.9 326 77.6
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 4.6e-154 548.1 331 78.2
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 6.0e-154 547.7 326 77.6
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 2.3e-153 545.8 327 79.5
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 2.3e-153 545.8 327 76.5
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 3.0e-153 545.4 307 81.1
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 6.6e-153 544.3 326 77.9
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 2.5e-152 542.3 326 76.1
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 4.3e-152 541.6 327 75.8
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 2.1e-151 539.3 327 74.9
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 3.6e-151 538.5 327 76.8
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 4.7e-151 538.1 326 76.1
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 4.7e-151 538.1 325 77.5
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 4.0e-150 535.0 339 73.5
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 5.2e-150 534.6 326 75.8
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 8.9e-150 533.9 326 75.8
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 9.8e-149 530.4 342 72.8
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 9.8e-149 530.4 342 72.8
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 9.8e-149 530.4 330 75.5
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 6.4e-148 527.7 339 73.2
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 1.1e-147 526.9 327 73.1
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 5.4e-147 524.6 327 74.9
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 9.2e-147 523.9 327 74.9
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 2.1e-146 522.7 319 76.5
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 6.0e-146 521.2 327 74.3
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 1.0e-145 520.4 327 74.0
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 1.9e-144 516.2 323 75.5
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.9e-144 516.2 322 73.9
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 9.5e-144 513.8 328 72.9
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.6e-143 513.1 326 73.9
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 4.7e-143 511.5 326 73.6
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 1.1e-142 510.4 298 78.2
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 2.3e-142 509.2 314 74.5
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 4.9e-140 501.5 327 70.3
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 9.2e-139 497.3 303 74.6
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 2.1e-138 496.1 316 73.1
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 2.1e-138 496.1 326 69.6
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 2.7e-138 495.7 327 72.5
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 4.6e-138 495.0 327 69.4
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 2.3e-137 492.7 329 69.0
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 2.3e-137 492.7 327 71.6
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.2e-135 486.9 312 73.7
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 3.9e-129 465.3 327 70.3
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 1.9e-128 463.0 254 84.6
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 6.9e-126 454.5 326 64.4
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 6.9e-126 454.5 328 64.0
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 4.4e-125 451.8 256 82.0
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 6.0e-122 441.4 303 67.3
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 6.6e-121 438.0 257 78.6
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 8.7e-121 437.6 255 79.2
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 2.8e-119 432.6 308 64.9
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 4.8e-119 431.8 318 65.1
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 4.0e-118 428.7 328 58.8
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 8.4e-116 421.0 327 63.9
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 1.9e-115 419.9 269 71.4
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 4.8e-111 405.2 255 75.7
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 4.8e-111 405.2 239 78.2
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 9.0e-110 401.0 309 59.9
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 4.5e-109 398.7 318 56.9
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 9.0e-102 374.4 221 81.0
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 9.0e-94 347.8 199 80.9
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 4.6e-90 335.5 319 51.7
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 4.8e-79 298.9 166 77.7
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 4.8e-63 245.7 145 83.4
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 4.7e-58 229.2 132 81.1
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 2.9e-47 193.4 108 77.8
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 4.9e-47 192.6 292 39.4
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 4.6e-45 186.0 141 55.3
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 2.3e-44 183.7 309 36.6
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 9.8e-40 168.3 306 34.0
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 2.0e-32 144.1 82 79.3
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 4.4e-32 142.9 111 66.7
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 1.3e-31 141.4 109 57.8
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 2.9e-31 140.2 78 84.6
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 1.0e-28 131.7 133 51.1
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 4.0e-25 119.8 74 70.3
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.2e-24 118.2 68 70.6
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 8.6e-20 102.1 58 75.9
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 2.1e-13 80.9 73 50.7
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 5.6e-11 72.8 62 59.7
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.2e-07 60.8 40 60.0
Rhsim11G0068700 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.4e-06 58.2 39 69.2


User provided reference genes

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