Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 8.7e-105 383.6 193 100.0
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.1e-104 383.3 193 99.5
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 2.5e-104 382.1 193 99.5
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 2.8e-95 352.1 193 90.7
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 4.9e-84 314.7 186 83.3
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 6.1e-82 307.8 188 83.0
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 7.9e-82 307.4 188 83.0
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 1.5e-80 303.1 161 97.5
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 4.8e-79 298.1 187 80.2
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 2.0e-77 292.7 185 76.2
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 4.5e-77 291.6 187 76.5
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 1.4e-75 286.6 186 72.6
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 1.9e-75 286.2 184 73.4
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 2.5e-75 285.8 186 74.2
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 3.2e-75 285.4 186 73.7
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 7.2e-75 284.3 186 74.2
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 9.4e-75 283.9 185 73.5
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 3.6e-74 282.0 186 72.6
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 7.9e-74 280.8 186 73.1
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 7.9e-74 280.8 186 71.0
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 7.9e-74 280.8 186 72.6
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 1.4e-73 280.0 186 73.7
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 1.8e-73 279.6 186 73.1
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 2.3e-73 279.3 186 71.0
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 3.9e-73 278.5 185 72.4
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 3.9e-73 278.5 186 71.5
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 1.1e-72 276.9 185 70.8
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 1.5e-72 276.6 192 71.4
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.5e-72 276.6 185 72.4
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 2.0e-72 276.2 187 70.6
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 4.3e-72 275.0 185 71.9
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 7.4e-72 274.2 188 70.7
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 2.2e-71 272.7 186 70.4
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 2.2e-71 272.7 186 70.4
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 2.8e-71 272.3 185 71.4
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 4.8e-71 271.6 186 73.1
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 8.2e-71 270.8 189 70.9
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 8.2e-71 270.8 184 70.1
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 1.1e-70 270.4 189 69.8
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.1e-70 270.4 181 71.3
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 1.4e-70 270.0 193 70.5
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 1.4e-70 270.0 192 70.8
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 1.4e-70 270.0 186 71.5
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 1.8e-70 269.6 191 69.6
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 4.1e-70 268.5 184 70.1
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 4.1e-70 268.5 185 68.6
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 5.3e-70 268.1 185 73.0
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 5.3e-70 268.1 182 71.4
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 6.9e-70 267.7 185 72.4
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 6.9e-70 267.7 185 72.4
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 9.1e-70 267.3 185 71.4
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 1.5e-69 266.5 185 66.5
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 2.6e-69 265.8 190 65.3
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 5.9e-69 264.6 185 68.1
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 1.0e-68 263.8 189 68.8
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.0e-68 263.8 187 67.4
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 1.0e-68 263.8 198 63.6
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 2.2e-68 262.7 190 64.2
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 2.2e-68 262.7 188 69.1
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 2.9e-68 262.3 181 71.8
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 3.8e-68 261.9 198 63.1
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 5.0e-68 261.5 189 68.3
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 6.5e-68 261.2 184 67.4
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 8.5e-68 260.8 199 63.3
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.1e-67 260.4 191 67.0
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.1e-67 260.4 186 69.4
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.4e-67 260.0 189 67.7
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 1.9e-67 259.6 185 67.6
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 2.5e-67 259.2 196 68.4
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 2.5e-67 259.2 185 69.7
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 2.5e-67 259.2 200 62.5
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 9.4e-67 257.3 184 69.0
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.6e-66 256.5 185 67.0
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 2.1e-66 256.1 185 66.5
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 2.7e-66 255.8 186 67.7
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 2.7e-66 255.8 185 68.6
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 3.6e-66 255.4 192 67.7
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 3.6e-66 255.4 184 66.3
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 1.8e-65 253.1 185 67.0
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 2.3e-65 252.7 190 65.3
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 3.9e-65 251.9 187 67.9
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 1.5e-64 250.0 179 68.2
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.3e-64 248.8 193 64.8
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.3e-64 248.8 193 64.8
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 2.4e-62 242.7 196 64.3
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 9.1e-62 240.7 217 58.1
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 2.6e-61 239.2 177 62.7
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 4.5e-61 238.4 203 61.1
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 7.2e-59 231.1 260 50.0
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 2.7e-58 229.2 188 63.3
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 1.3e-55 220.3 155 69.0
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 1.3e-55 220.3 153 68.0
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 3.7e-55 218.8 190 57.4
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 1.4e-54 216.9 154 70.8
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 1.8e-54 216.5 153 69.3
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 4.1e-54 215.3 154 67.5
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 5.0e-52 208.4 154 66.9
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 3.2e-51 205.7 153 66.7
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 7.2e-51 204.5 179 53.6
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 2.1e-50 203.0 156 62.8
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 8.0e-50 201.1 157 65.6
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 8.0e-50 201.1 180 55.6
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 3.4e-48 195.7 169 58.6
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 1.3e-47 193.7 185 55.1
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 3.8e-44 182.2 138 60.9
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 3.4e-40 169.1 191 48.7
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 9.8e-40 167.5 190 49.5
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 5.4e-38 161.8 190 48.9
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 4.4e-32 142.1 126 57.1
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 4.9e-31 138.7 187 44.4
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 1.1e-30 137.5 182 42.3
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 9.5e-27 124.4 104 61.5
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 3.7e-23 112.5 184 39.1
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 3.7e-15 85.9 56 73.2
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.9e-06 57.0 53 60.4


User provided reference genes

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