Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G2820 Fragaria x ananassa HOM05D000838 ORTHO05D045387 3.4e-34 147.9 81 100.0
FvH4_2g06280 Fragaria vesca HOM05D000838 ORTHO05D045387 4.9e-33 144.1 81 98.8
FAN15G0539 Fragaria x ananassa HOM05D000838 ORTHO05D000656 1.0e-30 136.3 81 93.8
RcHm_v2.0_Chr6g0256841 Rosa chinensis HOM05D000838 ORTHO05D000656 2.3e-22 108.6 82 75.6
MD05G1079200 Malus domestica HOM05D000838 ORTHO05D000656 1.7e-17 92.4 81 66.7
Prupe.8G122800 Prunus persica HOM05D000838 ORTHO05D000656 6.0e-15 84.0 81 58.0
MD10G1093200 Malus domestica HOM05D000838 ORTHO05D000656 5.0e-14 80.9 81 58.0
RcHm_v2.0_Chr6g0256811 Rosa chinensis HOM05D000838 ORTHO05D000656 2.5e-13 78.6 81 55.6
Manes.12G155800 Manihot esculenta HOM05D000838 ORTHO05D000656 7.3e-13 77.0 81 51.9
Sabra14G0055400 Salix brachista HOM05D000838 ORTHO05D000656 9.5e-13 76.6 81 55.6
FvH4_2g06310 Fragaria vesca HOM05D000838 ORTHO05D000656 1.6e-12 75.9 81 54.3
FAN15G1741 Fragaria x ananassa HOM05D000838 ORTHO05D000656 2.1e-12 75.5 81 54.3
Lj4g0026222 Lotus japonicus HOM05D000838 ORTHO05D000656 6.2e-12 73.9 81 56.8
Haze_01839 Corylus avellana HOM05D000838 ORTHO05D000656 1.1e-11 73.2 81 48.1
Potri.018G140700 Populus trichocarpa HOM05D000838 ORTHO05D000656 1.1e-11 73.2 81 51.9
Cfa005473 Carpinus fangiana HOM05D000838 ORTHO05D000656 1.8e-11 72.4 80 48.8
Ciclev10030084m.g Citrus clementina HOM05D000838 ORTHO05D000656 3.1e-11 71.6 81 51.9
Glyma.01G244800 Glycine max HOM05D000838 ORTHO05D000656 3.1e-11 71.6 81 50.6
Sabra15G0075900 Salix brachista HOM05D000838 ORTHO05D000656 3.1e-11 71.6 81 53.1
Haze_01844 Corylus avellana HOM05D000838 ORTHO05D000656 5.2e-11 70.9 81 46.9
Potri.009G103300 Populus trichocarpa HOM05D000838 ORTHO05D000656 6.8e-11 70.5 81 53.1
QL11p036115 Quercus lobata HOM05D000838 ORTHO05D000656 6.8e-11 70.5 80 50.0
Sabra09G0079100 Salix brachista HOM05D000838 ORTHO05D000656 2.0e-10 68.9 79 54.4
CANSAT25G2449 Cannabis sativa HOM05D000838 ORTHO05D000656 3.4e-10 68.2 81 45.7
CiPaw.05G052100 Carya illinoinensis HOM05D000838 ORTHO05D000656 1.7e-09 65.9 81 45.7
Dinv42145 Davidia involucrata HOM05D000838 ORTHO05D000656 6.4e-09 63.9 83 51.8
Ciclev10028399m.g Citrus clementina HOM05D000838 ORTHO05D000656 8.3e-09 63.5 87 48.3
MD10G1093000 Malus domestica HOM05D000838 ORTHO05D000656 1.4e-08 62.8 82 50.0
GSVIVG01031762001 Vitis vinifera HOM05D000838 ORTHO05D000656 1.9e-08 62.4 82 50.0
Prupe.8G122600 Prunus persica HOM05D000838 ORTHO05D000656 4.1e-08 61.2 81 50.6
Eucgr.G01458 Eucalyptus grandis HOM05D000838 ORTHO05D000656 5.4e-08 60.8 81 45.7
PGR042G1151 Punica granatum HOM05D000838 ORTHO05D000656 9.2e-08 60.1 83 47.0
Rhsim05G0083100 Rhododendron simsii HOM05D000838 ORTHO05D000656 9.2e-08 60.1 81 44.4
MD05G1079100 Malus domestica HOM05D000838 ORTHO05D000656 1.2e-07 59.7 82 46.3
PGR042G1266 Punica granatum HOM05D000838 ORTHO05D000656 2.1e-07 58.9 81 48.1
Actinidia17862 Actinidia chinensis HOM05D000838 ORTHO05D000656 2.7e-07 58.5 82 43.9
Cpa.g.sc62.24 Carica papaya HOM05D000838 ORTHO05D000656 3.5e-07 58.2 81 44.4
Potri.004G141800 Populus trichocarpa HOM05D000838 ORTHO05D000656 3.5e-07 58.2 86 43.0
TAR628G1072 Trochodendron aralioides HOM05D000838 ORTHO05D000656 4.6e-07 57.8 87 42.5
Atru.chr5.2737 Acer truncatum HOM05D000838 ORTHO05D000656 6.0e-07 57.4 81 44.4
COL.COLO4_12449 Corchorus olitorius HOM05D000447 ORTHO05D000315 6.0e-07 57.4 82 42.7
Thecc.02G099200 Theobroma cacao HOM05D000838 ORTHO05D000656 6.0e-07 57.4 82 42.7
RcHm_v2.0_Chr6g0256821 Rosa chinensis HOM05D000838 ORTHO05D000656 7.8e-07 57.0 81 48.1
CSS0004698 Camellia sinensis var. sinensis HOM05D000838 ORTHO05D000656 1.0e-06 56.6 82 43.9
CSS0008602 Camellia sinensis var. sinensis HOM05D000838 ORTHO05D000656 1.0e-06 56.6 82 43.9
Actinidia00449 Actinidia chinensis HOM05D000838 ORTHO05D000656 1.3e-06 56.2 83 45.8
Sabra07G0037700 Salix brachista HOM05D000838 ORTHO05D000656 1.3e-06 56.2 87 44.8
Rhsim11G0166600 Rhododendron simsii HOM05D000838 ORTHO05D000656 1.7e-06 55.8 85 41.2
Rhsim11G0166700 Rhododendron simsii HOM05D000838 ORTHO05D000656 1.7e-06 55.8 85 43.5
PSO675G4528 Papaver somniferum HOM05D000838 ORTHO05D000656 2.3e-06 55.5 87 42.5
PGR142G0798 Punica granatum HOM05D000838 ORTHO05D000656 2.3e-06 55.5 81 43.2
PGR142G3367 Punica granatum HOM05D000838 ORTHO05D000656 2.3e-06 55.5 81 43.2
PGR142G3670 Punica granatum HOM05D000838 ORTHO05D000656 2.3e-06 55.5 81 43.2
Cc07_g05930 Coffea canephora HOM05D000838 ORTHO05D000656 3.9e-06 54.7 87 41.4
Sed0001767 Sechium edule HOM05D000838 ORTHO05D000656 3.9e-06 54.7 81 35.8
Atru.chr5.2739 Acer truncatum HOM05D000838 ORTHO05D000656 5.1e-06 54.3 87 42.5
Dinv39863 Davidia involucrata HOM05D000838 ORTHO05D000656 6.6e-06 53.9 87 41.4
Oeu009813.1 Olea europaea HOM05D000838 ORTHO05D000656 8.6e-06 53.5 87 40.2
Potri.009G103400 Populus trichocarpa HOM05D000838 ORTHO05D000656 8.6e-06 53.5 86 40.7
Thecc.01G054300 Theobroma cacao HOM05D000838 ORTHO05D000656 8.6e-06 53.5 87 42.5


User provided reference genes

Program Settings