Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.3e-113 411.8 216 100.0
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.4e-111 406.4 216 99.1
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 3.1e-111 405.2 216 99.1
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 1.8e-106 389.4 216 94.4
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 1.7e-85 319.7 226 80.1
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 3.8e-85 318.5 225 80.0
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.4e-79 299.3 167 98.2
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 1.5e-73 280.0 217 74.2
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 2.6e-73 279.3 209 75.6
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 1.3e-72 276.9 224 71.0
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 1.1e-71 273.9 219 73.5
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 9.2e-71 270.8 218 73.4
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.2e-70 270.4 218 73.4
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 1.6e-70 270.0 226 69.0
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 1.7e-69 266.5 224 69.6
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 5.0e-69 265.0 226 69.5
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 5.0e-69 265.0 231 68.8
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 8.6e-69 264.2 205 72.2
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 1.5e-68 263.5 237 66.2
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 1.9e-68 263.1 170 82.9
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 1.9e-68 263.1 225 68.9
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 3.3e-68 262.3 170 82.9
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 4.3e-68 261.9 238 66.8
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 5.6e-68 261.5 217 71.0
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 9.5e-68 260.8 213 70.4
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.2e-67 260.4 216 69.9
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 4.7e-67 258.5 223 70.4
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 1.0e-66 257.3 214 67.3
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 1.4e-66 256.9 213 70.0
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 1.8e-66 256.5 167 83.2
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 2.3e-66 256.1 214 66.4
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 1.5e-65 253.4 216 67.1
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 1.5e-65 253.4 214 67.3
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 2.6e-65 252.7 217 68.7
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 4.4e-65 251.9 214 67.3
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 4.4e-65 251.9 208 68.8
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 9.8e-65 250.8 230 66.1
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 1.7e-64 250.0 214 67.3
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 2.2e-64 249.6 207 67.6
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 2.9e-64 249.2 214 67.8
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 3.7e-64 248.8 214 66.8
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 4.9e-64 248.4 196 70.4
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 1.1e-63 247.3 208 70.2
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 1.9e-63 246.5 217 67.7
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 2.4e-63 246.1 170 81.2
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 2.4e-63 246.1 230 66.5
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 2.4e-63 246.1 196 70.4
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 3.2e-63 245.7 209 67.0
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 3.2e-63 245.7 220 66.4
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 5.4e-63 245.0 172 76.7
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 5.4e-63 245.0 172 77.9
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 5.4e-63 245.0 170 78.8
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 1.6e-62 243.4 179 78.8
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 2.0e-62 243.0 207 66.2
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 4.6e-62 241.9 206 66.5
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 6.0e-62 241.5 207 65.7
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 6.0e-62 241.5 159 83.6
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.7e-61 240.0 230 65.7
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 1.1e-60 237.3 227 66.1
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 1.5e-60 236.9 224 64.7
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 3.3e-60 235.7 172 75.6
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 4.3e-60 235.3 173 77.5
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 4.3e-60 235.3 180 75.6
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 5.6e-60 235.0 213 63.8
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 5.6e-60 235.0 213 63.8
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 1.6e-59 233.4 178 70.8
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 1.6e-59 233.4 237 63.3
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.1e-58 230.7 218 67.0
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 1.4e-58 230.3 170 77.6
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 1.8e-58 229.9 183 71.6
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 5.2e-58 228.4 251 59.8
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 5.2e-58 228.4 171 74.3
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 5.2e-58 228.4 181 70.7
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 6.8e-58 228.0 179 74.3
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 1.2e-57 227.3 226 64.6
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 1.5e-57 226.9 175 69.7
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 4.4e-57 225.3 219 65.8
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 4.4e-57 225.3 228 64.9
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 4.4e-57 225.3 209 64.1
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 5.8e-57 224.9 177 75.1
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 5.8e-57 224.9 169 76.3
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 1.7e-56 223.4 173 76.3
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 2.2e-56 223.0 242 59.1
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 8.3e-56 221.1 173 72.3
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 4.1e-55 218.8 149 83.2
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 5.4e-55 218.4 175 75.4
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 5.4e-55 218.4 221 62.0
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 7.1e-55 218.0 199 64.3
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 9.2e-55 217.6 225 62.2
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 9.2e-55 217.6 220 61.4
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 6.6e-53 211.5 190 63.7
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 1.5e-52 210.3 173 68.2
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 2.5e-52 209.5 123 87.8
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 3.3e-52 209.1 216 61.1
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 1.6e-51 206.8 149 79.2
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 3.6e-51 205.7 162 73.5
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 8.9e-50 201.1 121 86.8
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 2.9e-48 196.1 159 75.5
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 3.8e-48 195.7 161 68.3
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 3.2e-47 192.6 124 80.6
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 3.2e-47 192.6 124 80.6
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 1.6e-46 190.3 167 61.1
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 1.3e-45 187.2 124 79.0
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 3.3e-44 182.6 268 46.3
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 1.5e-41 173.7 149 65.8
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 2.6e-41 172.9 160 61.9
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 3.4e-41 172.6 153 58.8
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 1.4e-39 167.2 146 58.2
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 5.1e-37 158.7 191 48.7
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 9.6e-36 154.5 108 76.9
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 4.9e-32 142.1 176 46.6
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 9.3e-31 137.9 167 53.9
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 1.6e-30 137.1 98 75.5
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 3.0e-29 132.9 121 62.0
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 6.9e-26 121.7 137 50.4
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 5.8e-25 118.6 98 59.2
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 6.4e-24 115.2 147 51.7
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 1.1e-23 114.4 90 71.1
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 1.9e-20 103.6 141 40.4
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 1.3e-19 100.9 64 82.8
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 1.2e-17 94.4 71 73.2


User provided reference genes

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