Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G2776 Fragaria x ananassa HOM05D014473 ORTHO05D046404 1.9e-240 835.5 437 100.0
FvH4_2g02770 Fragaria vesca HOM05D014473 ORTHO05D046404 2.4e-187 659.1 398 90.7
FvH4_2g00810 Fragaria vesca HOM05D014473 ORTHO05D197485 2.1e-122 443.4 479 61.0
FAN20G0905 Fragaria x ananassa HOM05D014473 ORTHO05D200089 3.4e-104 382.9 321 71.3
FvH4_5g04910 Fragaria vesca HOM05D002472 ORTHO05D002827 6.2e-50 202.6 426 39.0
FAN18G3439 Fragaria x ananassa HOM05D002472 ORTHO05D002827 4.0e-49 199.9 426 39.0
FAN13G3169 Fragaria x ananassa HOM05D002472 ORTHO05D002827 5.3e-49 199.5 426 39.0
FAN08G2952 Fragaria x ananassa HOM05D002472 ORTHO05D002827 4.4e-48 196.4 427 38.4
FAN04G2199 Fragaria x ananassa HOM05D002472 ORTHO05D002827 1.9e-43 181.0 405 38.3
FAN20G1814 Fragaria x ananassa HOM05D014473 ORTHO05D200971 4.3e-43 179.9 282 44.0
FAN18G0840 Fragaria x ananassa HOM05D014473 ORTHO05D002827 3.3e-35 153.7 304 38.5
FAN15G3503 Fragaria x ananassa HOM05D014473 ORTHO05D203930 6.2e-34 149.4 201 46.3
FAN20G1744 Fragaria x ananassa HOM05D014473 ORTHO05D209424 5.7e-27 126.3 151 49.7
FAN27G0422 Fragaria x ananassa HOM05D014473 ORTHO05D206895 1.4e-17 95.1 109 51.4
Atru.chr2.723 Acer truncatum HOM05D002472 ORTHO05D002827 1.5e-11 75.1 337 27.3
FAN27G0328 Fragaria x ananassa HOM05D014473 ORTHO05D201915 1.5e-11 75.1 69 62.3
Prupe.6G339400 Prunus persica HOM05D002472 ORTHO05D002827 5.7e-11 73.2 345 28.7
CANSAT54G0369 Cannabis sativa HOM05D002472 ORTHO05D002827 9.7e-11 72.4 342 30.1
RcHm_v2.0_Chr3g0452001 Rosa chinensis HOM05D002472 ORTHO05D002827 2.8e-10 70.9 118 41.5
PGSC0003DMG400022472 Solanum tuberosum HOM05D002472 ORTHO05D002827 4.8e-10 70.1 315 27.9
Medtr7g114660 Medicago truncatula HOM05D002472 ORTHO05D002827 1.1e-09 68.9 335 29.9
Psat3g008240 Pisum sativum HOM05D002472 ORTHO05D002827 1.1e-09 68.9 322 28.3
Sopen01g041460 Solanum pennellii HOM05D002472 ORTHO05D002827 1.1e-09 68.9 232 30.6
Oeu021635.2 Olea europaea HOM05D002472 ORTHO05D002827 1.8e-09 68.2 103 42.7
COL.COLO4_15282 Corchorus olitorius HOM05D002472 ORTHO05D002827 6.9e-09 66.2 113 38.9
ECA238G2290 Erigeron canadensis HOM05D002472 ORTHO05D001990 9.1e-09 65.9 113 38.9
FAN05G4815 Fragaria x ananassa HOM05D002472 ORTHO05D002827 9.1e-09 65.9 107 40.2
COL.COLO4_15279 Corchorus olitorius HOM05D002472 ORTHO05D002827 1.5e-08 65.1 103 39.8
CsaV3_1G045680 Cucumis sativus L. HOM05D002472 ORTHO05D002827 1.5e-08 65.1 333 28.5
TWI36G0925 Tripterygium wilfordii HOM05D002472 ORTHO05D002827 2.0e-08 64.7 272 29.0
COL.COLO4_15276 Corchorus olitorius HOM05D002472 ORTHO05D002827 2.6e-08 64.3 113 39.8
FvH4_6g03490 Fragaria vesca HOM05D002472 ORTHO05D002827 3.4e-08 63.9 107 39.3
FAN18G3852 Fragaria x ananassa HOM05D002472 ORTHO05D002827 3.4e-08 63.9 191 31.4
Lsat_1_v5_gn_2_65120 Lactuca sativa HOM05D002472 ORTHO05D002827 3.4e-08 63.9 113 37.2
FAN09G1451 Fragaria x ananassa HOM05D002472 ORTHO05D002827 4.5e-08 63.5 199 31.2
RcHm_v2.0_Chr2g0174231 Rosa chinensis HOM05D002472 ORTHO05D025362 4.5e-08 63.5 367 28.6
FAN14G3559 Fragaria x ananassa HOM05D002472 ORTHO05D002827 7.7e-08 62.8 107 38.3
Hund22109 Selenicereus undatus HOM05D002472 ORTHO05D002827 7.7e-08 62.8 104 41.3
FAN07G1131 Fragaria x ananassa HOM05D002472 ORTHO05D035748 1.3e-07 62.0 155 33.5
Ciclev10001390m.g Citrus clementina HOM05D002472 ORTHO05D002827 1.7e-07 61.6 348 25.3
COL.COLO4_15277 Corchorus olitorius HOM05D002472 ORTHO05D002827 1.7e-07 61.6 139 36.0
HPP92_023569 Vanilla planifolia HOM05D002472 ORTHO05D002827 1.7e-07 61.6 104 38.5
AUR62000974 Chenopodium quinoa HOM05D002472 ORTHO05D002827 2.9e-07 60.8 245 27.3
Migut.N01927 Erythranthe guttata HOM05D002472 ORTHO05D002827 2.9e-07 60.8 323 28.8
CSS0020760 Camellia sinensis var. sinensis HOM05D002472 ORTHO05D002827 3.8e-07 60.5 231 30.3
Ca_09406_v3 Cicer arietinum L. HOM05D002472 ORTHO05D002827 3.8e-07 60.5 335 26.3
FvH4_5g29750 Fragaria vesca HOM05D002472 ORTHO05D002827 5.0e-07 60.1 191 30.4
HanXRQChr14g0446141 Helianthus annuus HOM05D002472 ORTHO05D002827 1.1e-06 58.9 114 37.7
Os03g0695500 Oryza sativa ssp. japonica HOM05D002472 ORTHO05D002827 1.9e-06 58.2 105 36.2
FvH4_4g23690 Fragaria vesca HOM05D002472 ORTHO05D002827 2.5e-06 57.8 105 34.3
Zm00001eb053770 Zea mays HOM05D002472 ORTHO05D002827 3.2e-06 57.4 105 36.2
Zm00001eb217000 Zea mays HOM05D002472 ORTHO05D002827 4.2e-06 57.0 105 36.2
EL10Ac4g09186 Beta vulgaris HOM05D002472 ORTHO05D002827 5.5e-06 56.6 315 26.7
Cc02_g31530 Coffea canephora HOM05D002472 ORTHO05D002827 5.5e-06 56.6 110 39.1
Migut.N01928 Erythranthe guttata HOM05D002472 ORTHO05D002827 7.2e-06 56.2 133 33.1
COL.COLO4_15281 Corchorus olitorius HOM05D002472 ORTHO05D002827 9.4e-06 55.8 99 38.4


User provided reference genes

Program Settings