Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G2630 Fragaria x ananassa HOM05D004473 ORTHO05D005652 3.3e-49 198.0 95 100.0
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 1.0e-21 106.7 83 69.9
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 4.8e-16 87.8 84 58.3
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 4.8e-16 87.8 84 58.3
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 1.4e-15 86.3 84 56.0
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 4.1e-15 84.7 84 56.0
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 7.0e-15 84.0 77 55.8
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 1.6e-14 82.8 82 58.5
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.9e-14 80.9 84 53.6
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 7.7e-14 80.5 81 55.6
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.7e-14 80.5 84 52.4
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.7e-14 80.5 84 52.4
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.7e-14 80.5 84 52.4
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.7e-14 80.5 84 52.4
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.7e-14 80.5 84 52.4
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.7e-14 80.5 84 52.4
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 7.7e-14 80.5 75 57.3
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 3.8e-13 78.2 82 54.9
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 5.0e-13 77.8 84 54.8
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 5.0e-13 77.8 84 54.8
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 8.6e-13 77.0 86 52.3
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 1.1e-12 76.6 82 53.7
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 1.1e-12 76.6 84 56.0
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-12 76.6 84 50.0
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 1.5e-12 76.3 84 50.0
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.5e-12 76.3 84 51.2
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 5.5e-12 74.3 84 50.0
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 9.5e-12 73.6 84 51.2
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 3.6e-11 71.6 84 47.6
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 3.6e-11 71.6 84 47.6
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 3.6e-11 71.6 84 47.6
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 3.6e-11 71.6 84 47.6
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 6.1e-11 70.9 85 47.1
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 8.0e-11 70.5 84 46.4
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 8.0e-11 70.5 84 50.0
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 8.0e-11 70.5 84 50.0
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 8.0e-11 70.5 84 50.0
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 8.0e-11 70.5 83 50.6
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 8.0e-11 70.5 83 50.6
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.0e-10 70.1 84 50.0
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 3.0e-10 68.6 50 64.0
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 4.0e-10 68.2 91 47.3
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 4.0e-10 68.2 82 50.0
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 8.8e-10 67.0 84 48.8
TPR.G40775 Trifolium pratense HOM05D004473 ORTHO05D005652 8.8e-10 67.0 83 49.4
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 1.2e-09 66.6 83 51.8
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 1.2e-09 66.6 83 51.8
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 1.2e-09 66.6 83 51.8
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 1.2e-09 66.6 83 51.8
Atru.chr7.156 Acer truncatum HOM05D004473 ORTHO05D005652 2.6e-09 65.5 79 50.6
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.7e-09 64.3 78 47.4
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.7e-09 64.3 78 47.4
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 7.5e-09 63.9 83 45.8
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 9.8e-09 63.5 49 57.1
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 9.8e-09 63.5 49 57.1
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 9.8e-09 63.5 83 49.4
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 1.3e-08 63.2 82 46.3
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 1.7e-08 62.8 84 46.4
TPR.G10220 Trifolium pratense HOM05D004473 ORTHO05D005652 1.7e-08 62.8 83 48.2
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 3.7e-08 61.6 49 55.1
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 6.3e-08 60.8 84 45.2
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.8e-07 59.3 78 48.7
CAN.G386.22 Capsicum annuum HOM05D004473 ORTHO05D005652 2.4e-07 58.9 74 50.0
Duzib147G0859 Durio zibethinus HOM05D004473 ORTHO05D005696 4.1e-07 58.2 72 48.6
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 3.5e-06 55.1 58 51.7
HanXRQChr00c0496g0575171 Helianthus annuus HOM05D004473 ORTHO05D005652 7.8e-06 53.9 50 58.0


User provided reference genes

Program Settings