Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G2505 Fragaria x ananassa HOM05D026066 ORTHO05D035587 4.1e-248 860.9 424 100.0
FAN24G1919 Fragaria x ananassa HOM05D026066 ORTHO05D035587 1.6e-244 849.0 423 99.1
FvH4_2g07510 Fragaria vesca HOM05D026066 ORTHO05D035587 5.7e-242 840.5 424 97.9
FvH4_6g02420 Fragaria vesca HOM05D026066 ORTHO05D196957 4.5e-45 186.4 362 35.1
FAN27G2322 Fragaria x ananassa HOM05D000007 ORTHO05D035779 2.2e-15 87.8 321 27.1
MD04G1020500 Malus domestica HOM05D000007 ORTHO05D000521 2.2e-15 87.8 321 24.6
Prupe.1G170000 Prunus persica HOM05D000007 ORTHO05D000521 3.7e-15 87.0 324 26.9
FAN12G0768 Fragaria x ananassa HOM05D000007 ORTHO05D000521 2.6e-13 80.9 367 23.7
RcHm_v2.0_Chr4g0412631 Rosa chinensis HOM05D000007 ORTHO05D000521 2.6e-13 80.9 281 26.7
arahy.Tifrunner.gnm1.ann1.N9LGBL Arachis hypogaea HOM05D000007 ORTHO05D000017 1.7e-12 78.2 308 25.0
arahy.Tifrunner.gnm1.ann1.PR6200 Arachis hypogaea HOM05D000007 ORTHO05D000017 1.7e-12 78.2 308 25.0
MD04G1021100 Malus domestica HOM05D000007 ORTHO05D000521 2.9e-12 77.4 339 24.2
Aqoxy5G03361 Aquilegia oxysepala HOM05D000007 ORTHO05D000676 3.8e-12 77.0 260 26.9
QL08p017442 Quercus lobata HOM05D000007 ORTHO05D000017 3.8e-12 77.0 271 26.9
Prupe.1G170100 Prunus persica HOM05D000007 ORTHO05D000521 3.2e-11 73.9 340 24.1
Atru.chr4.1517 Acer truncatum HOM05D000007 ORTHO05D000017 4.2e-11 73.6 255 27.1
Peaxi162Scf00152g00825 Petunia axillaris HOM05D000007 ORTHO05D000039 7.2e-11 72.8 291 26.1
Medtr2g047892 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-10 71.6 227 27.8
Rhsim04G0042200 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.6e-10 71.6 322 23.6
Thecc.04G270600 Theobroma cacao HOM05D000007 ORTHO05D000017 1.6e-10 71.6 277 26.4
Medtr3g010870 Medicago truncatula HOM05D000007 ORTHO05D000017 3.6e-10 70.5 284 23.9
FAN19G0854 Fragaria x ananassa HOM05D000007 ORTHO05D005026 8.0e-10 69.3 315 25.7
Lj2g0007827 Lotus japonicus HOM05D000007 ORTHO05D000017 8.0e-10 69.3 300 25.0
Medtr3g030240 Medicago truncatula HOM05D000007 ORTHO05D000017 8.0e-10 69.3 277 22.4
Potri.001G318400 Populus trichocarpa HOM05D000007 ORTHO05D000017 8.0e-10 69.3 274 21.9
FAN23G0826 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.0e-09 68.9 315 25.4
HanXRQChr08g0216011 Helianthus annuus HOM05D000007 ORTHO05D000017 1.0e-09 68.9 282 24.1
arahy.Tifrunner.gnm1.ann1.L3WLEE Arachis hypogaea HOM05D000007 ORTHO05D000017 1.4e-09 68.6 221 25.8
Rhsim04G0040700 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.8e-09 68.2 285 25.6
RcHm_v2.0_Chr2g0154671 Rosa chinensis HOM05D000007 ORTHO05D000017 2.3e-09 67.8 289 26.3
Ah.15g097560 Amaranthus hybridus HOM05D000007 ORTHO05D000039 3.0e-09 67.4 269 24.2
Medtr3g010590 Medicago truncatula HOM05D000007 ORTHO05D000017 3.9e-09 67.0 282 23.4
PSO675G4172 Papaver somniferum HOM05D000007 ORTHO05D000676 5.2e-09 66.6 243 25.9
arahy.Tifrunner.gnm1.ann1.0HK6QF Arachis hypogaea HOM05D000007 ORTHO05D000017 6.7e-09 66.2 211 25.1
HanXRQChr07g0185881 Helianthus annuus HOM05D000007 ORTHO05D000017 6.7e-09 66.2 268 26.9
Potri.017G058900 Populus trichocarpa HOM05D000007 ORTHO05D000017 6.7e-09 66.2 291 25.1
FvH4_1g04511 Fragaria vesca HOM05D000007 ORTHO05D005026 8.8e-09 65.9 288 25.0
Prupe.1G169800 Prunus persica HOM05D000007 ORTHO05D000521 8.8e-09 65.9 144 32.6
PSO135G0762 Papaver somniferum HOM05D000007 ORTHO05D000676 1.1e-08 65.5 286 23.8
arahy.Tifrunner.gnm1.ann1.7PDR7X Arachis hypogaea HOM05D000007 ORTHO05D000017 1.5e-08 65.1 224 27.2
CiPaw.15G116700 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.5e-08 65.1 336 22.9
RcHm_v2.0_Chr4g0412831 Rosa chinensis HOM05D000007 ORTHO05D000521 1.5e-08 65.1 145 30.3
Medtr3g464470 Medicago truncatula HOM05D000007 ORTHO05D000017 2.0e-08 64.7 259 23.6
Medtr3g464500 Medicago truncatula HOM05D000007 ORTHO05D000017 2.0e-08 64.7 252 23.4
arahy.Tifrunner.gnm1.ann1.S3Q5J6 Arachis hypogaea HOM05D000007 ORTHO05D000017 2.6e-08 64.3 225 24.4
BolC3t14489H Brassica oleracea HOM05D000171 ORTHO05D000101 2.6e-08 64.3 244 27.5
Cc10_g11870 Coffea canephora HOM05D000007 ORTHO05D000521 2.6e-08 64.3 248 26.6
CAN.G411.76 Capsicum annuum HOM05D000007 ORTHO05D000039 3.3e-08 63.9 150 30.0
AUR62028685 Chenopodium quinoa HOM05D000007 ORTHO05D000017 3.3e-08 63.9 244 23.8
AUR62031045 Chenopodium quinoa HOM05D000007 ORTHO05D000039 3.3e-08 63.9 281 22.8
vmacro00488 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 4.4e-08 63.5 275 25.8
TPR.G30820 Trifolium pratense HOM05D000007 ORTHO05D000017 5.7e-08 63.2 282 25.2
arahy.Tifrunner.gnm1.ann1.GL2JS2 Arachis hypogaea HOM05D000007 ORTHO05D000017 7.4e-08 62.8 221 24.9
Gohir.A06G008600 Gossypium hirsutum HOM05D000007 ORTHO05D000017 7.4e-08 62.8 359 22.6
MD02G1290700 Malus domestica HOM05D000007 ORTHO05D000017 7.4e-08 62.8 296 22.3
arahy.Tifrunner.gnm1.ann1.D6FMYT Arachis hypogaea HOM05D000007 ORTHO05D000017 9.7e-08 62.4 219 25.1
PSO782G0120 Papaver somniferum HOM05D000007 ORTHO05D000676 9.7e-08 62.4 271 21.8
arahy.Tifrunner.gnm1.ann1.JCQ2WP Arachis hypogaea HOM05D000007 ORTHO05D000017 1.3e-07 62.0 223 23.3
arahy.Tifrunner.gnm1.ann1.VMDZ8Z Arachis hypogaea HOM05D000007 ORTHO05D000017 1.3e-07 62.0 226 25.2
BcaC01g05920 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-07 62.0 248 27.0
PSO478G4250 Papaver somniferum HOM05D000007 ORTHO05D000676 1.3e-07 62.0 210 27.6
COL.COLO4_15974 Corchorus olitorius HOM05D000007 ORTHO05D000521 1.7e-07 61.6 264 23.1
FAN21G3512 Fragaria x ananassa HOM05D000007 ORTHO05D000521 1.7e-07 61.6 226 28.3
Peaxi162Scf00469g00073 Petunia axillaris HOM05D000007 ORTHO05D000039 1.7e-07 61.6 331 23.6
arahy.Tifrunner.gnm1.ann1.NIV6PW Arachis hypogaea HOM05D000007 ORTHO05D000017 2.2e-07 61.2 227 23.8
AL3G17110 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 2.8e-07 60.8 200 30.0
Peaxi162Scf00048g00194 Petunia axillaris HOM05D000007 ORTHO05D000017 2.8e-07 60.8 258 22.9
AL6G42950 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.7e-07 60.5 264 25.0
arahy.Tifrunner.gnm1.ann1.D1G4W2 Arachis hypogaea HOM05D000007 ORTHO05D000017 3.7e-07 60.5 226 25.2
C03p21070 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-07 60.5 243 26.7
Lj3A538T48 Lonicera japonica HOM05D000007 ORTHO05D000017 3.7e-07 60.5 140 30.0
FAN28G0694 Fragaria x ananassa HOM05D000007 ORTHO05D005026 6.3e-07 59.7 286 23.1
Lj1C663T4 Lonicera japonica HOM05D000007 ORTHO05D000039 6.3e-07 59.7 249 24.5
arahy.Tifrunner.gnm1.ann1.8KF55G Arachis hypogaea HOM05D000007 ORTHO05D000017 8.2e-07 59.3 218 25.2
Hma1.2p1_0657F.1_g197080 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 8.2e-07 59.3 217 23.5
Lju114C2T0 Lonicera japonica HOM05D000007 ORTHO05D000039 8.2e-07 59.3 252 23.0
Lj1C663T3 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-06 58.9 325 24.0
Medtr5g096710 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-06 58.5 154 31.2
PSO210G2562 Papaver somniferum HOM05D000007 ORTHO05D000676 1.4e-06 58.5 147 29.9
ECA236G1971 Erigeron canadensis HOM05D000371 ORTHO05D001484 1.8e-06 58.2 272 23.9
PSO724G0980 Papaver somniferum HOM05D000007 ORTHO05D000676 2.4e-06 57.8 206 26.7
Thhalv10009523m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.1e-06 57.4 243 25.9
Atru.chr1.119 Acer truncatum HOM05D000007 ORTHO05D000017 4.1e-06 57.0 261 24.9
HanXRQChr15g0467301 Helianthus annuus HOM05D000007 ORTHO05D000039 4.1e-06 57.0 236 23.7
Medtr0128s0010 Medicago truncatula HOM05D000007 ORTHO05D000017 4.1e-06 57.0 131 30.5
Atru.chr1.120 Acer truncatum HOM05D000007 ORTHO05D000017 5.3e-06 56.6 268 23.5
Dinv24460 Davidia involucrata HOM05D000007 ORTHO05D000039 5.3e-06 56.6 288 24.0
Medtr7g022600 Medicago truncatula HOM05D000007 ORTHO05D000017 5.3e-06 56.6 123 28.5
Migut.O00490 Erythranthe guttata HOM05D000007 ORTHO05D000017 7.0e-06 56.2 174 28.2
Medtr7g055977 Medicago truncatula HOM05D000007 ORTHO05D000017 9.1e-06 55.8 229 27.1


User provided reference genes

Program Settings