Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 8.7e-212 740.3 462 100.0
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.2e-189 666.8 478 90.2
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 2.8e-186 655.6 495 87.3
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 4.8e-186 654.8 484 88.8
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 1.2e-155 553.9 399 78.2
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 2.8e-149 532.7 401 75.1
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 4.6e-144 515.4 402 71.4
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 2.1e-141 506.5 402 70.4
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 2.3e-140 503.1 402 68.9
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 2.3e-140 503.1 402 68.9
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 7.1e-137 491.5 346 75.7
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 7.1e-137 491.5 402 68.7
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 1.2e-136 490.7 346 75.1
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 2.7e-136 489.6 404 67.8
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 3.5e-136 489.2 399 67.7
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 4.6e-136 488.8 399 68.9
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 3.9e-135 485.7 402 67.7
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 3.3e-134 482.6 406 68.0
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 1.6e-133 480.3 403 67.7
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 2.1e-133 479.9 346 74.6
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 3.6e-133 479.2 346 74.6
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 3.6e-133 479.2 381 70.6
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 4.7e-133 478.8 413 65.9
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 8.1e-133 478.0 403 67.2
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 1.1e-132 477.6 413 65.9
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 1.8e-132 476.9 407 65.8
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 2.4e-132 476.5 403 66.7
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 6.9e-132 474.9 403 65.5
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 1.5e-131 473.8 392 67.6
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 8.4e-130 468.0 403 64.5
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.0e-127 461.1 396 65.7
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 1.3e-127 460.7 353 71.1
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 3.3e-126 456.1 429 60.4
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 1.3e-125 454.1 403 63.3
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 2.8e-125 453.0 391 65.7
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 4.8e-125 452.2 403 63.0
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 5.3e-124 448.7 405 63.7
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 1.2e-123 447.6 398 63.3
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 2.9e-122 443.0 400 63.0
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 6.4e-122 441.8 404 62.9
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.9e-121 440.3 411 60.3
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 7.1e-121 438.3 398 62.3
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 7.1e-121 438.3 396 61.6
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 9.3e-121 438.0 400 63.0
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 2.7e-120 436.4 346 68.5
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 6.0e-120 435.3 391 61.6
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 7.9e-120 434.9 401 60.3
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 1.0e-119 434.5 400 61.2
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 2.3e-119 433.3 400 62.5
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 3.9e-119 432.6 346 67.9
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 6.7e-119 431.8 410 61.7
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 6.7e-119 431.8 403 59.8
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 8.7e-119 431.4 402 62.2
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 1.5e-118 430.6 348 67.8
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.5e-118 430.6 403 59.1
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 1.9e-118 430.3 399 62.2
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.3e-117 427.6 403 59.1
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 2.8e-117 426.4 401 60.6
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 1.1e-116 424.5 403 58.6
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 2.4e-116 423.3 399 61.4
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 6.9e-116 421.8 399 61.4
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 9.0e-116 421.4 402 58.5
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 2.6e-115 419.9 401 59.1
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 3.4e-115 419.5 405 60.0
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 3.4e-115 419.5 403 57.6
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 2.2e-114 416.8 400 62.2
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 8.4e-114 414.8 397 58.9
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 2.4e-113 413.3 330 67.9
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 4.2e-113 412.5 330 68.2
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 7.1e-113 411.8 330 67.9
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 1.6e-112 410.6 399 59.1
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 2.7e-112 409.8 343 64.1
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 2.7e-112 409.8 407 59.7
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 4.6e-112 409.1 329 69.0
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 4.6e-112 409.1 398 59.8
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 7.9e-112 408.3 329 67.8
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 1.3e-111 407.5 397 58.9
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 1.3e-111 407.5 405 58.5
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 1.8e-111 407.1 498 52.0
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 1.8e-111 407.1 498 52.0
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 2.3e-111 406.8 397 61.5
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 3.0e-111 406.4 400 58.2
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 3.0e-111 406.4 398 58.8
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 3.9e-111 406.0 391 60.9
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 1.9e-110 403.7 403 58.8
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 5.6e-110 402.1 329 66.0
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 9.6e-110 401.4 389 58.9
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 9.6e-110 401.4 329 66.6
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 1.3e-109 401.0 396 57.1
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 1.6e-109 400.6 396 60.1
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 6.2e-109 398.7 329 66.0
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 8.1e-109 398.3 387 60.5
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 2.4e-108 396.7 405 56.5
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 2.4e-108 396.7 398 60.1
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 5.3e-108 395.6 397 59.2
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 9.0e-108 394.8 340 64.1
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.0e-107 393.7 396 59.1
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 7.6e-107 391.7 329 65.0
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 7.6e-107 391.7 329 65.0
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 1.0e-106 391.3 396 58.6
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 1.7e-106 390.6 398 57.0
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 2.2e-106 390.2 402 57.0
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 3.8e-106 389.4 402 58.7
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 1.0e-103 381.3 402 56.0
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 1.8e-103 380.6 349 63.6
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 8.7e-103 378.3 402 59.2
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 6.3e-101 372.1 398 54.3
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 6.5e-98 362.1 348 57.2
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 1.3e-95 354.4 356 58.4
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 1.2e-91 341.3 277 67.1
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 3.4e-91 339.7 277 66.8
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 1.4e-87 327.8 410 49.8
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 4.1e-84 316.2 289 62.3
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 1.3e-82 311.2 292 57.2
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 2.1e-80 303.9 288 57.6
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 5.2e-79 299.3 261 64.8
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 2.6e-78 297.0 313 64.5
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 6.3e-77 292.4 166 94.0
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 5.3e-76 289.3 223 68.6
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 2.7e-72 276.9 412 41.7
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 3.5e-67 260.0 401 39.4
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 1.7e-58 231.1 350 40.9
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 2.3e-58 230.7 185 67.6
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.3e-53 214.9 256 52.3
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 1.8e-52 211.1 406 36.9
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 2.9e-50 203.8 261 49.4
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 3.6e-48 196.8 496 34.1
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 3.4e-46 190.3 140 73.6
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 2.7e-43 180.6 254 48.4
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 3.9e-42 176.8 157 61.8
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 5.8e-38 162.9 135 66.7
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 4.4e-30 136.7 99 74.7
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 6.0e-27 126.3 147 51.7
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 1.9e-25 121.3 126 57.1
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 4.7e-24 116.7 95 69.5
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 4.7e-24 116.7 95 69.5
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 1.7e-21 108.2 111 55.9
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 6.2e-16 89.7 106 48.1
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 2.4e-15 87.8 154 42.2
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 3.1e-15 87.4 119 51.3
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 1.2e-14 85.5 56 73.2
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 1.7e-13 81.6 96 53.1
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 3.8e-13 80.5 60 76.7
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.2e-11 75.5 62 66.1
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 1.2e-11 75.5 75 60.0
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 1.0e-10 72.4 170 35.9
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 8.7e-10 69.3 165 34.5
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 1.9e-09 68.2 87 43.7
CSS0049387 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 2.4e-07 61.2 191 29.8


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