Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G2255 Fragaria x ananassa HOM05D007656 ORTHO05D008529 5.0e-87 324.3 154 100.0
FvH4_2g06610 Fragaria vesca HOM05D000005 ORTHO05D008529 8.5e-71 270.4 159 85.5
RcHm_v2.0_Chr6g0258611 Rosa chinensis HOM05D007656 ORTHO05D008529 1.8e-57 226.1 127 81.1
Prupe.8G120400 Prunus persica HOM05D000005 ORTHO05D000012 3.1e-28 129.0 121 52.9
Prupe.8G120300 Prunus persica HOM05D000005 ORTHO05D000012 3.8e-26 122.1 133 45.9
MD15G1057200 Malus domestica HOM05D000521 ORTHO05D008529 1.2e-24 117.1 127 51.2
Prupe.8G119800 Prunus persica HOM05D000005 ORTHO05D000012 1.7e-23 113.2 121 50.4
Prupe.1G197200 Prunus persica HOM05D007656 ORTHO05D008529 6.6e-23 111.3 120 51.7
Prupe.5G012500 Prunus persica HOM05D007656 ORTHO05D008529 1.9e-22 109.8 121 50.4
Prupe.5G012700 Prunus persica HOM05D007656 ORTHO05D008529 1.9e-22 109.8 121 50.4
FAN15G0049 Fragaria x ananassa HOM05D007656 ORTHO05D008529 4.3e-22 108.6 122 50.8
FvH4_2g06570 Fragaria vesca HOM05D007656 ORTHO05D008529 5.6e-22 108.2 122 50.8
Prupe.4G127700 Prunus persica HOM05D007656 ORTHO05D008529 7.3e-22 107.8 120 47.5
MD00G1172900 Malus domestica HOM05D000009 ORTHO05D000008 2.8e-21 105.9 113 48.7
Prupe.8G119700 Prunus persica HOM05D007656 ORTHO05D008529 1.4e-20 103.6 114 48.2
MD06G1218400 Malus domestica HOM05D000306 ORTHO05D008529 6.9e-20 101.3 120 47.5
RcHm_v2.0_Chr6g0276271 Rosa chinensis HOM05D000005 ORTHO05D008529 3.4e-19 99.0 121 46.3
MD15G1057100 Malus domestica HOM05D007656 ORTHO05D008529 5.8e-19 98.2 97 48.5
Prupe.5G012300 Prunus persica HOM05D007656 ORTHO05D008529 9.9e-19 97.4 115 48.7
RcHm_v2.0_Chr6g0276291 Rosa chinensis HOM05D000005 ORTHO05D008529 9.9e-19 97.4 118 44.1
RcHm_v2.0_Chr6g0276251 Rosa chinensis HOM05D000005 ORTHO05D008529 4.9e-18 95.1 118 43.2
MD07G1045600 Malus domestica HOM05D000009 ORTHO05D000008 1.3e-15 87.0 113 46.0
FAN21G1592 Fragaria x ananassa HOM05D000005 ORTHO05D008529 1.7e-15 86.7 117 38.5
Prupe.5G012400 Prunus persica HOM05D007656 ORTHO05D008529 1.7e-15 86.7 120 43.3
FvH4_2g06640 Fragaria vesca HOM05D007656 ORTHO05D008529 2.3e-15 86.3 109 48.6
FvH4_2g36090 Fragaria vesca HOM05D000005 ORTHO05D008529 3.9e-15 85.5 117 37.6
FAN24G2886 Fragaria x ananassa HOM05D000005 ORTHO05D008529 5.1e-15 85.1 109 48.6
Prupe.5G011800 Prunus persica HOM05D007656 ORTHO05D008529 5.1e-15 85.1 114 43.0
MD07G1045400 Malus domestica HOM05D000009 ORTHO05D000008 6.6e-15 84.7 113 45.1
Manes.01G113600 Manihot esculenta HOM05D007656 ORTHO05D008529 6.6e-15 84.7 105 43.8
MD07G1044900 Malus domestica HOM05D007656 ORTHO05D008529 8.7e-15 84.3 113 46.9
Prupe.5G011700 Prunus persica HOM05D007656 ORTHO05D008529 8.7e-15 84.3 114 44.7
FvH4_2g14140 Fragaria vesca HOM05D000005 ORTHO05D008529 2.5e-14 82.8 117 37.6
Manes.10G131200 Manihot esculenta HOM05D007656 ORTHO05D008529 1.3e-13 80.5 121 41.3
MD02G1277000 Malus domestica HOM05D007656 ORTHO05D008529 1.6e-13 80.1 119 41.2
Manes.10G012400 Manihot esculenta HOM05D000510 ORTHO05D001548 2.1e-13 79.7 114 40.4
Ciclev10003516m.g Citrus clementina HOM05D007656 ORTHO05D008529 3.6e-13 79.0 115 41.7
MD11G1218200 Malus domestica HOM05D007656 ORTHO05D008529 3.6e-13 79.0 102 42.2
Atru.chr1.33 Acer truncatum HOM05D007656 ORTHO05D008529 2.4e-12 76.3 115 34.8
Manes.10G012500 Manihot esculenta HOM05D000510 ORTHO05D001548 2.4e-12 76.3 114 36.8
Manes.10G012600 Manihot esculenta HOM05D000510 ORTHO05D001548 2.4e-12 76.3 114 36.8
Manes.12G099400 Manihot esculenta HOM05D000009 ORTHO05D000008 3.1e-12 75.9 113 33.6
Duzib132G0971 Durio zibethinus HOM05D007656 ORTHO05D008529 5.3e-12 75.1 111 36.9
Cpa.g.sc87.8 Carica papaya HOM05D000317 ORTHO05D008529 6.9e-12 74.7 128 35.2
Cpa.g.sc87.14 Carica papaya HOM05D000317 ORTHO05D008529 9.0e-12 74.3 128 35.9
COL.COLO4_29685 Corchorus olitorius HOM05D007656 ORTHO05D008529 2.0e-11 73.2 118 37.3
Ciclev10021347m.g Citrus clementina HOM05D007656 ORTHO05D008529 3.4e-11 72.4 112 37.5
MD03G1201200 Malus domestica HOM05D007656 ORTHO05D008529 4.5e-11 72.0 116 38.8
Manes.10G012300 Manihot esculenta HOM05D000510 ORTHO05D001548 7.6e-11 71.2 117 35.9
Ciclev10024498m.g Citrus clementina HOM05D007656 ORTHO05D008529 9.9e-11 70.9 111 34.2
RcHm_v2.0_Chr6g0276221 Rosa chinensis HOM05D007656 ORTHO05D029394 9.9e-11 70.9 105 36.2
FvH4_2g14130 Fragaria vesca HOM05D007656 ORTHO05D029394 1.3e-10 70.5 124 36.3
Prupe.4G212800 Prunus persica HOM05D007656 ORTHO05D008529 1.3e-10 70.5 134 37.3
Duzib213G0740 Durio zibethinus HOM05D007656 ORTHO05D008529 1.7e-10 70.1 119 32.8
Thecc.01G158100 Theobroma cacao HOM05D007656 ORTHO05D008529 1.7e-10 70.1 111 36.9
MD05G1139600 Malus domestica HOM05D000494 ORTHO05D008529 2.9e-10 69.3 121 34.7
Manes.10G131300 Manihot esculenta HOM05D007656 ORTHO05D008529 3.8e-10 68.9 118 36.4
CARHR110660 Cardamine hirsuta HOM05D000005 ORTHO05D008529 4.9e-10 68.6 104 33.7
CARHR110670 Cardamine hirsuta HOM05D000005 ORTHO05D008529 8.4e-10 67.8 104 35.6
Thecc.02G020400 Theobroma cacao HOM05D007656 ORTHO05D008529 8.4e-10 67.8 104 40.4
FvH4_2g36100 Fragaria vesca HOM05D000005 ORTHO05D029394 1.4e-09 67.0 124 36.3
Manes.07G014200 Manihot esculenta HOM05D007656 ORTHO05D008529 1.4e-09 67.0 120 32.5
RcHm_v2.0_Chr6g0258551 Rosa chinensis HOM05D007656 ORTHO05D008529 1.4e-09 67.0 118 36.4
Carub.0003s3445 Capsella rubella HOM05D000005 ORTHO05D000294 2.4e-09 66.2 104 36.5
FAN20G3034 Fragaria x ananassa HOM05D000005 ORTHO05D029394 3.2e-09 65.9 124 35.5
Ciclev10002893m.g Citrus clementina HOM05D007656 ORTHO05D008529 4.2e-09 65.5 94 37.2
Ciclev10003163m.g Citrus clementina HOM05D007656 ORTHO05D008529 4.2e-09 65.5 104 34.6
Manes.07G014101 Manihot esculenta HOM05D007656 ORTHO05D008529 4.2e-09 65.5 120 32.5
AL3G47945 Arabidopsis lyrata HOM05D000005 ORTHO05D000294 5.5e-09 65.1 102 34.3
Ciclev10002149m.g Citrus clementina HOM05D007656 ORTHO05D008529 5.5e-09 65.1 105 39.0
Prupe.8G120000 Prunus persica HOM05D007656 ORTHO05D008529 5.5e-09 65.1 113 38.1
Potri.001G007501 Populus trichocarpa HOM05D007656 ORTHO05D008529 7.1e-09 64.7 106 36.8
TWI53G0295 Tripterygium wilfordii HOM05D000694 ORTHO05D008529 7.1e-09 64.7 113 34.5
Thhalv10002051m.g Eutrema salsugineum HOM05D000005 ORTHO05D008529 2.1e-08 63.2 112 33.0
Potri.018G023600 Populus trichocarpa HOM05D007656 ORTHO05D008529 2.1e-08 63.2 106 39.6
Thecc.02G023700 Theobroma cacao HOM05D007656 ORTHO05D008529 2.1e-08 63.2 108 33.3
AT2G20142 Arabidopsis thaliana HOM05D000005 ORTHO05D000294 2.7e-08 62.8 104 33.7
Prupe.8G120500 Prunus persica HOM05D007656 ORTHO05D008529 6.0e-08 61.6 116 37.1
Manes.04G013200 Manihot esculenta HOM05D000548 ORTHO05D008529 7.9e-08 61.2 103 35.9
Prupe.4G212900 Prunus persica HOM05D007656 ORTHO05D008529 1.8e-07 60.1 112 34.8
Thecc.02G021500 Theobroma cacao HOM05D007656 ORTHO05D008529 3.0e-07 59.3 110 39.1
BolC8t51984H Brassica oleracea HOM05D007656 ORTHO05D008529 3.9e-07 58.9 104 31.7
Sabra19G0011600 Salix brachista HOM05D007656 ORTHO05D008529 3.9e-07 58.9 102 37.3
Ciclev10003101m.g Citrus clementina HOM05D007656 ORTHO05D008529 5.1e-07 58.5 111 30.6
Thecc.02G023800 Theobroma cacao HOM05D007656 ORTHO05D008529 5.1e-07 58.5 100 34.0
Sabra19G0012000 Salix brachista HOM05D007656 ORTHO05D008529 6.7e-07 58.2 107 37.4
Thecc.07G066400 Theobroma cacao HOM05D000521 ORTHO05D008529 6.7e-07 58.2 101 33.7
Ciclev10024525m.g Citrus clementina HOM05D007656 ORTHO05D008529 1.1e-06 57.4 104 32.7
COL.COLO4_30650 Corchorus olitorius HOM05D007656 ORTHO05D008529 1.5e-06 57.0 113 33.6
Potri.T044600 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.5e-06 57.0 130 30.8
Manes.10G119600 Manihot esculenta HOM05D000138 ORTHO05D008529 1.9e-06 56.6 99 33.3
Ciclev10003970m.g Citrus clementina HOM05D007656 ORTHO05D008529 3.3e-06 55.8 88 31.8
Sabra19G0010500 Salix brachista HOM05D007656 ORTHO05D008529 4.3e-06 55.5 106 35.8
SabraUnG0004400 Salix brachista HOM05D003906 ORTHO05D004776 5.6e-06 55.1 106 34.9
Sabra18G0026200 Salix brachista HOM05D007656 ORTHO05D008529 7.4e-06 54.7 103 35.0
THA.LOC104820128 Tarenaya hassleriana HOM05D007656 ORTHO05D008529 9.6e-06 54.3 109 34.9


User provided reference genes

Program Settings