Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.8e-162 575.9 292 100.0
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 3.3e-132 475.3 243 99.6
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 4.5e-129 464.9 243 96.7
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 5.9e-105 384.8 201 95.5
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 3.7e-99 365.5 243 77.8
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 3.6e-62 242.7 254 55.9
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 4.0e-61 239.2 248 54.8
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 2.4e-58 229.9 242 56.2
FAN15G0678 Fragaria x ananassa HOM05D000722 ORTHO05D000590 2.7e-57 226.5 206 62.1
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 8.1e-46 188.3 249 45.4
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 9.9e-44 181.4 241 46.1
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 2.2e-43 180.3 241 45.2
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 1.9e-39 167.2 243 40.3
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 4.3e-39 166.0 250 41.6
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 9.6e-39 164.9 248 41.1
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 1.3e-38 164.5 251 41.8
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 2.1e-38 163.7 236 39.8
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 4.8e-38 162.5 253 41.1
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 8.1e-38 161.8 256 41.4
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 1.8e-37 160.6 251 39.0
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 4.0e-37 159.5 229 42.4
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 9.0e-37 158.3 279 36.9
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 9.0e-37 158.3 243 39.5
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 1.7e-35 154.1 248 42.3
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 4.2e-34 149.4 377 31.0
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 1.0e-32 144.8 243 40.3
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 3.0e-32 143.3 248 41.1
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 3.0e-32 143.3 250 39.6
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 3.9e-32 142.9 241 41.9
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 3.9e-32 142.9 254 40.2
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 6.7e-32 142.1 229 40.2
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 1.9e-31 140.6 247 36.8
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 5.6e-31 139.0 247 38.5
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 5.6e-31 139.0 247 35.6
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 1.6e-30 137.5 234 36.8
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 4.8e-30 136.0 254 36.2
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 1.4e-29 134.4 263 35.7
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 1.4e-29 134.4 265 36.2
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 1.8e-29 134.0 243 37.0
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 1.5e-28 131.0 244 37.3
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 5.8e-28 129.0 254 37.0
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 1.1e-26 124.8 245 34.7
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 2.4e-26 123.6 277 32.5
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 4.2e-26 122.9 220 35.0
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 3.5e-25 119.8 251 37.1
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 7.9e-25 118.6 247 35.6
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 1.0e-24 118.2 238 36.1
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 5.1e-24 115.9 252 35.3
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 6.7e-24 115.5 248 33.5
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 8.7e-24 115.2 329 29.2
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 1.1e-23 114.8 246 36.6
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 1.9e-23 114.0 329 29.2
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 4.3e-23 112.8 250 36.8
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 5.6e-23 112.5 247 35.6
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.3e-22 111.3 246 33.3
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 1.6e-22 110.9 294 31.6
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 7.6e-20 102.1 212 36.3
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 1.3e-19 101.3 206 35.9
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 1.3e-19 101.3 261 31.8
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 2.2e-19 100.5 273 30.4
Gohir.D12G031200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 3.8e-19 99.8 222 32.9
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 1.1e-18 98.2 267 30.3
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 1.4e-18 97.8 250 34.4
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 2.5e-18 97.1 249 33.7
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 4.2e-18 96.3 213 35.7
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 5.5e-18 95.9 250 34.4
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 7.1e-18 95.5 220 33.2
Psat4g137840 Pisum sativum HOM05D000120 ORTHO05D009410 3.5e-17 93.2 284 32.0
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 1.3e-16 91.3 259 27.0
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 1.8e-16 90.9 237 32.9
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 2.3e-16 90.5 256 30.9
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 3.3e-15 86.7 250 29.6
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 9.7e-15 85.1 238 30.3
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 2.1e-14 84.0 216 32.4
Zm00001eb180650 Zea mays HOM05D000120 ORTHO05D009410 3.7e-14 83.2 213 28.6
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 4.8e-14 82.8 233 31.3
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 1.4e-13 81.3 242 31.4
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 6.9e-13 79.0 261 28.4
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 1.2e-12 78.2 220 31.4
Sabra04G0109000 Salix brachista HOM05D000120 ORTHO05D009410 1.5e-12 77.8 240 29.2
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 5.0e-11 72.8 201 27.9
AT4G38980 Arabidopsis thaliana HOM05D011065 ORTHO05D009410 3.2e-10 70.1 279 25.8
Sp7g36860 Schrenkiella parvula HOM05D011065 ORTHO05D009410 3.2e-10 70.1 279 27.2
Thhalv10027283m.g Eutrema salsugineum HOM05D011065 ORTHO05D009410 7.2e-10 68.9 258 26.7
AL7G10880 Arabidopsis lyrata HOM05D011065 ORTHO05D009410 9.3e-10 68.6 267 27.3
BcaB03g12236 Brassica carinata HOM05D011065 ORTHO05D009410 9.3e-10 68.6 257 28.4
Aa31LG6G16270 Aethionema arabicum HOM05D011065 ORTHO05D009410 6.1e-09 65.9 247 24.3
Glyma.12G151000 Glycine max HOM05D000120 ORTHO05D009410 1.3e-08 64.7 120 33.3
BcaC01g00270 Brassica carinata HOM05D011065 ORTHO05D009410 3.9e-08 63.2 259 25.9
C03p77470 Brassica napus HOM05D011065 ORTHO05D009410 3.9e-08 63.2 259 25.9
BolC3t20002H Brassica oleracea HOM05D011065 ORTHO05D009410 3.9e-08 63.2 259 25.9
A08p23900 Brassica napus HOM05D011065 ORTHO05D009410 6.7e-08 62.4 247 28.7
BraA08t34348Z Brassica rapa HOM05D011065 ORTHO05D009410 8.7e-08 62.0 256 27.7
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 3.3e-07 60.1 279 26.9
arahy.Tifrunner.gnm1.ann1.T5BQ73 Arachis hypogaea HOM05D000120 ORTHO05D009410 5.7e-07 59.3 76 42.1
BcaC01g00269 Brassica carinata HOM05D011065 ORTHO05D009410 1.3e-06 58.2 236 26.7
C03p77450 Brassica napus HOM05D011065 ORTHO05D009410 1.3e-06 58.2 236 26.7
BolC3t20000H Brassica oleracea HOM05D011065 ORTHO05D009410 1.3e-06 58.2 236 26.7
Carub.0007s0080 Capsella rubella HOM05D011065 ORTHO05D009410 2.2e-06 57.4 269 23.4
CDE02G1861 Ceratophyllum demersum HOM05D055785 ORTHO05D043884 3.7e-06 56.6 91 45.1
THA.LOC104824794 Tarenaya hassleriana HOM05D011065 ORTHO05D009410 8.2e-06 55.5 206 25.7
HPP92_003062 Vanilla planifolia HOM05D000120 ORTHO05D009410 8.2e-06 55.5 216 28.7


User provided reference genes

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