Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 7.1e-176 620.5 326 100.0
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 7.1e-176 620.5 326 100.0
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 1.1e-157 560.1 327 93.0
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.1e-149 533.5 330 90.3
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.1e-147 525.4 330 88.8
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 2.8e-140 502.3 327 84.1
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.3e-133 478.8 326 83.7
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 2.0e-101 373.2 328 67.7
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 7.0e-99 364.8 328 65.9
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 7.6e-69 265.0 327 52.9
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 2.2e-68 263.5 339 53.1
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 4.9e-68 262.3 341 52.8
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.9e-67 260.4 334 52.7
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 4.2e-67 259.2 334 52.7
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 1.2e-66 257.7 329 52.0
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.2e-66 257.7 334 52.4
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 2.7e-66 256.5 333 52.0
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 4.6e-66 255.8 330 52.1
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 1.8e-65 253.8 331 50.5
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 8.7e-65 251.5 336 51.5
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 1.1e-64 251.1 329 52.0
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 1.9e-64 250.4 330 51.8
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 1.3e-63 247.7 338 53.0
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 8.1e-63 245.0 329 50.8
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 1.4e-62 244.2 332 49.1
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 1.5e-61 240.7 329 51.1
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 4.5e-61 239.2 327 49.5
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 1.3e-60 237.7 333 48.9
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 4.9e-60 235.7 334 49.1
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 4.2e-59 232.6 337 49.3
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 7.9e-58 228.4 313 50.5
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 1.3e-57 227.6 350 48.0
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.1e-56 224.6 330 48.2
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 4.3e-56 222.6 335 44.8
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 5.6e-56 222.2 396 44.9
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 1.6e-55 220.7 344 45.1
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 6.2e-55 218.8 311 49.8
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 4.0e-54 216.1 343 46.9
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 7.6e-53 211.8 332 45.8
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 2.9e-52 209.9 317 46.4
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 3.8e-52 209.5 331 45.0
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 4.6e-50 202.6 121 91.7
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 6.0e-50 202.2 339 43.7
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 2.3e-49 200.3 336 46.1
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 1.5e-48 197.6 308 47.1
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 1.5e-48 197.6 344 44.2
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 2.4e-46 190.3 335 44.2
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 1.7e-44 184.1 371 39.4
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 1.1e-43 181.4 328 41.2
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 1.4e-43 181.0 328 41.2
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 1.2e-42 177.9 314 40.8
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 3.0e-41 173.3 289 45.7
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 1.1e-40 171.4 289 45.0
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 4.3e-40 169.5 315 40.6
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 5.7e-40 169.1 330 40.3
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 5.7e-40 169.1 326 42.9
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 5.7e-40 169.1 332 40.4
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 4.8e-39 166.0 332 40.7
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 4.8e-39 166.0 331 42.6
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 1.1e-38 164.9 367 37.6
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 1.4e-38 164.5 316 43.0
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 2.4e-38 163.7 331 43.2
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 3.1e-38 163.3 333 37.5
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 7.7e-37 158.7 326 42.3
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 1.0e-36 158.3 363 39.7
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 2.5e-35 153.7 331 40.8
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 3.2e-35 153.3 343 38.2
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 5.5e-35 152.5 328 40.9
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 5.5e-35 152.5 336 42.0
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 9.4e-35 151.8 335 38.5
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 6.1e-34 149.1 328 37.8
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 1.4e-33 147.9 404 36.4
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 1.1e-32 144.8 326 36.5
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 1.7e-31 141.0 330 36.7
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 1.7e-31 141.0 329 38.6
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 1.7e-31 141.0 315 37.8
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.8e-31 140.2 333 39.0
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 4.8e-31 139.4 229 41.0
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 8.2e-31 138.7 330 38.2
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 2.4e-30 137.1 336 37.5
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 3.1e-30 136.7 331 39.9
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 5.3e-30 136.0 190 44.7
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 3.4e-29 133.3 334 38.3
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 3.4e-29 133.3 167 48.5
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 2.9e-28 130.2 208 44.7
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 5.0e-28 129.4 243 41.6
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 8.5e-28 128.6 145 53.1
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 2.5e-27 127.1 336 36.6
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 7.2e-27 125.6 326 36.2
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 1.6e-26 124.4 283 42.8
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 1.6e-26 124.4 338 34.9
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 2.1e-26 124.0 333 35.1
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 6.7e-25 119.0 251 38.6
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 6.7e-25 119.0 327 37.9
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 1.1e-24 118.2 333 39.0
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 1.1e-24 118.2 324 36.4
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 1.5e-24 117.9 332 39.2
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 2.8e-23 113.6 330 37.3
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 3.7e-23 113.2 260 35.4
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 4.8e-23 112.8 244 42.2
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 1.1e-22 111.7 334 37.7
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.1e-22 111.7 194 40.2
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 3.1e-22 110.2 324 35.5
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 4.1e-22 109.8 291 34.0
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 1.2e-21 108.2 330 34.5
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 2.0e-21 107.5 335 37.6
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 5.9e-21 105.9 317 37.2
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 5.9e-21 105.9 336 38.4
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.7e-20 104.4 227 38.8
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 8.5e-20 102.1 298 33.9
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 7.2e-19 99.0 143 44.1
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 1.0e-17 95.1 333 36.3
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 2.6e-16 90.5 306 33.0
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 4.1e-14 83.2 197 35.0
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 3.8e-12 76.6 329 33.4
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 2.5e-11 73.9 223 33.6
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 3.2e-11 73.6 259 30.5
Dinv15805 Davidia involucrata HOM05D006273 ORTHO05D007607 3.6e-10 70.1 125 41.6
SEGI_25142 Sequoiadendron giganteum HOM05D006273 ORTHO05D007607 1.4e-09 68.2 254 31.1
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 1.8e-09 67.8 328 32.0
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 8.8e-09 65.5 238 35.3
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 1.4e-06 58.2 65 61.5


User provided reference genes

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