Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G1812 Fragaria x ananassa HOM05D012992 ORTHO05D020705 2.8e-70 268.5 134 100.0
FAN20G2539 Fragaria x ananassa HOM05D012992 ORTHO05D020705 4.1e-61 238.0 119 99.2
FvH4_2g24210 Fragaria vesca HOM05D012992 ORTHO05D020705 3.4e-55 218.4 107 100.0
FAN20G0181 Fragaria x ananassa HOM05D012992 ORTHO05D001207 3.4e-39 165.2 119 75.6
FvH4_2g24200 Fragaria vesca HOM05D012992 ORTHO05D001207 4.9e-38 161.4 119 73.9
FAN24G0490 Fragaria x ananassa HOM05D012992 ORTHO05D001207 4.9e-38 161.4 119 73.9
FAN27G2024 Fragaria x ananassa HOM05D012992 ORTHO05D020705 2.3e-32 142.5 76 90.8
FAN15G2801 Fragaria x ananassa HOM05D012992 ORTHO05D020705 7.5e-31 137.5 120 66.7
FAN27G0987 Fragaria x ananassa HOM05D012992 ORTHO05D020705 9.8e-31 137.1 119 65.5
FAN24G0865 Fragaria x ananassa HOM05D012992 ORTHO05D020705 1.7e-30 136.3 120 66.7
FAN15G3114 Fragaria x ananassa HOM05D012992 ORTHO05D001207 3.9e-27 125.2 99 68.7
FAN07G0948 Fragaria x ananassa HOM05D001578 ORTHO05D001207 1.5e-26 123.2 120 58.3
FvH4_2g24190 Fragaria vesca HOM05D012992 ORTHO05D045488 8.9e-16 87.4 80 61.2
FAN24G0283 Fragaria x ananassa HOM05D012992 ORTHO05D045488 8.9e-16 87.4 80 61.2
RcHm_v2.0_Chr3g0482891 Rosa chinensis HOM05D001578 ORTHO05D001207 5.1e-11 71.6 112 42.0
Prupe.1G114500 Prunus persica HOM05D001578 ORTHO05D001207 1.2e-09 67.0 127 35.4
FvH4_4g20440 Fragaria vesca HOM05D001578 ORTHO05D001207 2.8e-09 65.9 116 40.5
FAN07G2152 Fragaria x ananassa HOM05D001578 ORTHO05D001207 2.8e-09 65.9 116 40.5
FAN12G2021 Fragaria x ananassa HOM05D001578 ORTHO05D001207 2.8e-09 65.9 116 40.5
MD13G1150400 Malus domestica HOM05D001578 ORTHO05D001207 8.1e-09 64.3 104 36.5
MD16G1150100 Malus domestica HOM05D001578 ORTHO05D001207 8.1e-09 64.3 112 39.3
Glyma.20G029700 Glycine max HOM05D001578 ORTHO05D001207 5.2e-08 61.6 117 35.0
Cfa015283 Carpinus fangiana HOM05D001578 ORTHO05D001207 1.5e-07 60.1 118 36.4
Haze_01334 Corylus avellana HOM05D001578 ORTHO05D001207 2.6e-07 59.3 117 35.0
Haze_01339 Corylus avellana HOM05D001578 ORTHO05D001207 3.4e-07 58.9 116 35.3
FvH4_1g05890 Fragaria vesca HOM05D001578 ORTHO05D001207 4.4e-07 58.5 112 40.2
Glyma.20G028900 Glycine max HOM05D001578 ORTHO05D001207 5.8e-07 58.2 115 33.0
Glyma.20G029500 Glycine max HOM05D001578 ORTHO05D001207 7.6e-07 57.8 117 32.5
Glyma.20G029200 Glycine max HOM05D001578 ORTHO05D001207 9.9e-07 57.4 117 32.5
Manes.15G002100 Manihot esculenta HOM05D001578 ORTHO05D001207 1.7e-06 56.6 113 34.5
RcHm_v2.0_Chr2g0143761 Rosa chinensis HOM05D001578 ORTHO05D001207 1.7e-06 56.6 117 35.9
RcHm_v2.0_Chr2g0144321 Rosa chinensis HOM05D001578 ORTHO05D001207 1.7e-06 56.6 117 35.9
RcHm_v2.0_Chr7g0200071 Rosa chinensis HOM05D001578 ORTHO05D001207 1.7e-06 56.6 117 35.9
Lj1g0019408 Lotus japonicus HOM05D001578 ORTHO05D001207 2.2e-06 56.2 109 31.2
Lj1g0016642 Lotus japonicus HOM05D001578 ORTHO05D001207 2.9e-06 55.8 116 31.9
MD13G1150200 Malus domestica HOM05D001578 ORTHO05D001207 4.9e-06 55.1 106 34.9
FAN18G0021 Fragaria x ananassa HOM05D001578 ORTHO05D001207 6.4e-06 54.7 114 36.0
RcHm_v2.0_Chr4g0426481 Rosa chinensis HOM05D001578 ORTHO05D001207 6.4e-06 54.7 120 35.8
FvH4_5g04330 Fragaria vesca HOM05D001578 ORTHO05D001207 8.4e-06 54.3 113 36.3


User provided reference genes

Program Settings