Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G1627 Fragaria x ananassa HOM05D005302 ORTHO05D006422 7.7e-64 246.9 118 100.0
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 6.6e-63 243.8 118 98.3
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 2.5e-62 241.9 118 97.5
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 2.1e-61 238.8 118 96.6
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 2.1e-61 238.8 118 95.8
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 4.7e-61 237.7 115 97.4
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 5.9e-56 220.7 118 87.3
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 6.6e-55 217.2 118 86.4
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 1.5e-54 216.1 118 83.9
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 8.0e-53 210.3 118 80.5
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 2.3e-52 208.8 118 78.8
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 8.9e-52 206.8 118 79.7
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 1.5e-51 206.1 118 79.7
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 1.5e-51 206.1 118 82.2
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 2.0e-51 205.7 118 79.7
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 4.4e-51 204.5 118 78.8
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 4.4e-51 204.5 118 78.8
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 7.5e-51 203.8 118 78.0
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 7.5e-51 203.8 118 78.0
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 9.8e-51 203.4 118 79.7
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 1.7e-50 202.6 118 79.7
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 1.7e-50 202.6 118 78.8
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.2e-50 202.2 118 78.0
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 2.2e-50 202.2 118 78.0
Cfa013356 Carpinus fangiana HOM05D005302 ORTHO05D006422 4.9e-50 201.1 118 76.3
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 8.3e-50 200.3 118 78.0
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 4.1e-49 198.0 118 75.4
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 7.0e-49 197.2 118 77.1
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 7.0e-49 197.2 117 75.2
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 9.2e-49 196.8 118 74.6
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 9.2e-49 196.8 118 77.1
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 1.2e-48 196.4 118 75.4
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 1.2e-48 196.4 118 75.4
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 1.2e-48 196.4 118 73.7
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 1.6e-48 196.1 117 76.9
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 1.6e-48 196.1 118 74.6
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 2.0e-48 195.7 118 78.0
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 2.0e-48 195.7 118 74.6
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 2.0e-48 195.7 118 75.4
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 3.5e-48 194.9 118 73.7
Hma1.2p1_0393F.1_g143070 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 3.5e-48 194.9 118 74.6
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 3.5e-48 194.9 118 74.6
Lj7A704G80 Lonicera japonica HOM05D005302 ORTHO05D006422 3.5e-48 194.9 118 73.7
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 4.6e-48 194.5 118 75.4
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 6.0e-48 194.1 118 74.6
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 7.8e-48 193.7 118 75.4
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 7.8e-48 193.7 118 75.4
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 7.8e-48 193.7 118 75.4
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 1.0e-47 193.4 109 79.8
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 1.3e-47 193.0 118 73.7
Hma1.2p1_1884F.1_g306480 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.3e-47 193.0 118 73.7
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 1.7e-47 192.6 118 75.4
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 6.6e-47 190.7 118 72.9
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 8.6e-47 190.3 118 72.9
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 1.1e-46 189.9 118 73.7
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 1.5e-46 189.5 117 71.8
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 3.3e-46 188.3 119 73.9
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 3.3e-46 188.3 118 72.0
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 5.6e-46 187.6 118 72.9
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 7.3e-46 187.2 119 72.3
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 7.3e-46 187.2 119 72.3
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 7.3e-46 187.2 118 71.2
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 9.5e-46 186.8 118 70.3
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 9.5e-46 186.8 118 70.3
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 9.5e-46 186.8 118 70.3
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 1.2e-45 186.4 138 64.5
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 1.2e-45 186.4 118 69.5
Sabra18G0041600 Salix brachista HOM05D005302 ORTHO05D006422 1.2e-45 186.4 111 74.8
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 2.8e-45 185.3 116 71.6
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 4.7e-45 184.5 118 70.3
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 4.7e-45 184.5 119 72.3
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 6.2e-45 184.1 119 71.4
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 6.2e-45 184.1 119 71.4
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 6.2e-45 184.1 115 71.3
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 8.1e-45 183.7 118 70.3
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 1.1e-44 183.3 119 71.4
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 1.4e-44 183.0 119 71.4
Cc07_g15020 Coffea canephora HOM05D005302 ORTHO05D006422 1.8e-44 182.6 118 72.0
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 1.8e-44 182.6 118 72.0
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 2.3e-44 182.2 118 70.3
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 2.3e-44 182.2 118 69.5
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 2.3e-44 182.2 119 70.6
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 2.3e-44 182.2 119 70.6
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 3.1e-44 181.8 119 71.4
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 3.1e-44 181.8 118 70.3
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 5.2e-44 181.0 118 70.3
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 6.8e-44 180.6 119 71.4
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 6.8e-44 180.6 115 70.4
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 1.2e-43 179.9 119 70.6
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 1.2e-43 179.9 110 72.7
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 1.2e-43 179.9 119 69.7
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 1.5e-43 179.5 109 77.1
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.0e-43 179.1 118 69.5
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 3.4e-43 178.3 118 67.8
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 4.4e-43 177.9 118 69.5
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 7.5e-43 177.2 118 68.6
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 7.5e-43 177.2 118 68.6
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 9.8e-43 176.8 119 69.7
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 1.3e-42 176.4 112 69.6
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 2.2e-42 175.6 118 67.8
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 3.7e-42 174.9 110 71.8
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 6.4e-42 174.1 118 66.1
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 6.4e-42 174.1 120 69.2
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 1.4e-41 172.9 122 63.9
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 1.9e-41 172.6 110 70.0
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 3.2e-41 171.8 118 66.9
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 9.2e-41 170.2 96 80.2
Zm00001eb237270 Zea mays HOM05D005302 ORTHO05D006422 1.7e-39 166.0 118 64.4
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 3.0e-39 165.2 118 63.6
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 2.1e-37 159.1 115 65.2
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.1e-36 156.8 118 59.3
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 2.6e-35 152.1 118 56.8
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 2.6e-35 152.1 118 55.9
Potri.006G240100 Populus trichocarpa HOM05D005302 ORTHO05D006422 1.1e-33 146.7 109 63.3
SEGI_31241 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 9.2e-33 143.7 118 54.2
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 3.9e-31 138.3 118 55.9
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 4.3e-30 134.8 118 55.1
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 2.1e-29 132.5 118 52.5
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 1.4e-25 119.8 118 50.8
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 1.6e-24 116.3 120 49.2
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 3.1e-20 102.1 119 47.1
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 3.1e-20 102.1 120 42.5
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 4.5e-19 98.2 59 74.6
Sabra18G0041700 Salix brachista HOM05D005302 ORTHO05D006422 1.3e-18 96.7 60 65.0
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 9.3e-17 90.5 59 69.5
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 8.7e-15 84.0 76 52.6
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 1.3e-13 80.1 108 47.2
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 1.2e-08 63.5 46 69.6
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 1.3e-07 60.1 44 61.4


User provided reference genes

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