Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G1498 Fragaria x ananassa HOM05D066129 ORTHO05D046400 6.3e-168 594.0 286 100.0
FvH4_2g22762 Fragaria vesca HOM05D066129 ORTHO05D046400 4.3e-60 235.7 133 88.7
MD05G1357800 Malus domestica HOM05D000151 ORTHO05D000074 4.7e-22 109.4 377 28.1
RcHm_v2.0_Chr6g0290601 Rosa chinensis HOM05D000151 ORTHO05D000074 3.1e-18 96.7 208 35.6
RcHm_v2.0_Chr6g0290581 Rosa chinensis HOM05D000151 ORTHO05D000074 5.9e-17 92.4 210 33.8
RcHm_v2.0_Chr6g0287791 Rosa chinensis HOM05D000151 ORTHO05D000074 8.5e-16 88.6 278 27.0
FAN24G1182 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.1e-15 88.2 260 29.2
RcHm_v2.0_Chr6g0287741 Rosa chinensis HOM05D000151 ORTHO05D000074 1.1e-15 88.2 361 24.9
FAN08G1298 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.5e-15 87.0 225 31.6
FAN13G3246 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.5e-15 87.0 238 31.1
Prupe.8G190900 Prunus persica HOM05D000151 ORTHO05D000074 2.5e-15 87.0 225 32.4
FvH4_2g21230 Fragaria vesca HOM05D000151 ORTHO05D000074 3.2e-15 86.7 260 28.8
FAN06G4102 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.2e-15 86.3 357 26.6
RcHm_v2.0_Chr5g0032291 Rosa chinensis HOM05D000151 ORTHO05D000074 4.2e-15 86.3 205 32.2
MD05G1357500 Malus domestica HOM05D000151 ORTHO05D000074 5.5e-15 85.9 404 25.7
FAN20G0778 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.7e-14 82.8 244 29.1
Peaxi162Scf00132g00056 Petunia axillaris HOM05D000151 ORTHO05D000074 1.4e-13 81.3 209 32.1
RcHm_v2.0_Chr5g0006331 Rosa chinensis HOM05D000151 ORTHO05D000074 3.0e-13 80.1 294 26.5
PGSC0003DMG400034482 Solanum tuberosum HOM05D000151 ORTHO05D000074 5.2e-13 79.3 211 30.3
FAN11G4015 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.8e-13 78.6 277 27.8
FAN04G2560 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.2e-12 78.2 240 29.6
FAN13G0355 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.2e-12 78.2 208 30.8
Peaxi162Scf00089g00166 Petunia axillaris HOM05D000151 ORTHO05D000074 1.5e-12 77.8 220 28.2
PGSC0003DMG400018156 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.6e-12 77.0 216 30.1
PGSC0003DMG400009902 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.4e-12 76.6 207 32.9
FAN18G2144 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.4e-12 76.3 290 28.6
Nitab4.5_0000058g0110 Nicotiana tabacum HOM05D000151 ORTHO05D000074 7.5e-12 75.5 208 30.8
PGSC0003DMG400018086 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.5e-12 75.5 211 29.4
FvH4_7g21590 Fragaria vesca HOM05D000151 ORTHO05D000074 9.8e-12 75.1 382 24.3
Peaxi162Scf00017g00215 Petunia axillaris HOM05D000151 ORTHO05D000074 9.8e-12 75.1 216 31.0
FAN27G0663 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.7e-11 74.3 74 52.7
RcHm_v2.0_Chr1g0372911 Rosa chinensis HOM05D000151 ORTHO05D000074 1.7e-11 74.3 262 26.3
PGSC0003DMG400018087 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.2e-11 73.9 212 27.4
FvH4_2g23250 Fragaria vesca HOM05D000151 ORTHO05D000074 3.7e-11 73.2 73 52.1
FvH4_5g23981 Fragaria vesca HOM05D000151 ORTHO05D000074 3.7e-11 73.2 190 29.5
FAN04G3257 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.7e-11 73.2 220 29.1
FAN06G3114 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.7e-11 73.2 384 24.5
Peaxi162Scf00078g00539 Petunia axillaris HOM05D000151 ORTHO05D000074 3.7e-11 73.2 215 30.7
Peaxi162Scf00078g00540 Petunia axillaris HOM05D000151 ORTHO05D000074 3.7e-11 73.2 215 30.7
Peaxi162Scf00271g00224 Petunia axillaris HOM05D000151 ORTHO05D000074 3.7e-11 73.2 205 31.7
Peaxi162Scf39827g00001 Petunia axillaris HOM05D000151 ORTHO05D000074 3.7e-11 73.2 205 31.7
FAN24G3062 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.9e-11 72.8 73 52.1
Peaxi162Scf00089g00158 Petunia axillaris HOM05D000151 ORTHO05D000074 4.9e-11 72.8 220 29.1
PGSC0003DMG400003928 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.1e-10 71.6 206 29.6
PGSC0003DMG400037580 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.4e-10 70.5 206 29.1
PGSC0003DMG400040741 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.4e-10 70.5 204 30.4
FAN20G3166 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.1e-10 70.1 72 51.4
PGSC0003DMG400012149 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.1e-10 69.7 220 30.0
PGSC0003DMG400012150 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.1e-10 69.7 216 31.0
Peaxi162Scf00760g10023 Petunia axillaris HOM05D000151 ORTHO05D000074 2.0e-09 67.4 224 25.9
CAN.G999.2 Capsicum annuum HOM05D000151 ORTHO05D000074 2.7e-09 67.0 210 26.2
Solyc04g016580.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 2.7e-09 67.0 219 27.9
FAN06G3075 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.5e-09 66.2 329 24.0
Nitab4.5_0001095g0040 Nicotiana tabacum HOM05D000151 ORTHO05D000074 4.5e-09 66.2 229 27.9
Peaxi162Scf00038g02631 Petunia axillaris HOM05D000151 ORTHO05D000074 4.5e-09 66.2 207 28.5
PGSC0003DMG400012867 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.5e-09 66.2 217 30.9
FvH4_7g21350 Fragaria vesca HOM05D000151 ORTHO05D000074 5.9e-09 65.9 346 25.4
Sopen12g006910 Solanum pennellii HOM05D000151 ORTHO05D000074 5.9e-09 65.9 213 28.6
FAN10G1847 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.8e-09 65.5 266 25.6
PGSC0003DMG400012285 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.8e-09 65.5 213 28.6
Nitab4.5_0000642g0140 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.7e-08 64.3 218 28.0
FAN01G0776 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.3e-08 63.9 267 26.6
Nitab4.5_0002367g0120 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.3e-08 63.9 214 27.6
Peaxi162Scf00074g00438 Petunia axillaris HOM05D000151 ORTHO05D000074 2.3e-08 63.9 243 27.2
Sopen04g035970 Solanum pennellii HOM05D000151 ORTHO05D000074 2.3e-08 63.9 207 30.4
TAR636G2770 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.3e-08 63.9 394 23.6
Peaxi162Scf00017g00231 Petunia axillaris HOM05D000151 ORTHO05D000074 6.6e-08 62.4 211 26.5
Solyc04g017610.2 Solanum lycopersicum HOM05D000151 ORTHO05D000074 6.6e-08 62.4 215 25.6
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.6e-08 62.4 360 23.3
Peaxi162Scf00746g00412 Petunia axillaris HOM05D000151 ORTHO05D000074 8.6e-08 62.0 223 27.8
Peaxi162Scf00746g00510 Petunia axillaris HOM05D000151 ORTHO05D000074 8.6e-08 62.0 223 27.8
Rhsim02G0249600 Rhododendron simsii HOM05D000151 ORTHO05D000074 8.6e-08 62.0 218 28.0
Solyc08g082350.4 Solanum lycopersicum HOM05D000151 ORTHO05D000074 1.1e-07 61.6 210 28.1
Sopen03g031860 Solanum pennellii HOM05D000151 ORTHO05D000074 1.1e-07 61.6 219 27.9
Eucgr.H00634 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.9e-07 60.8 176 27.3
FAN04G1849 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.9e-07 60.8 279 25.4
Hma1.2p1_0091F.1_g046550 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 1.9e-07 60.8 218 29.4
Sopen08g030590 Solanum pennellii HOM05D000151 ORTHO05D000074 1.9e-07 60.8 213 27.2
CAN.G1804.4 Capsicum annuum HOM05D000151 ORTHO05D000074 2.5e-07 60.5 214 25.7
Peaxi162Scf00074g00073 Petunia axillaris HOM05D000151 ORTHO05D000074 2.5e-07 60.5 211 28.4
Atru.chr10.13 Acer truncatum HOM05D000151 ORTHO05D000074 3.3e-07 60.1 219 29.7
MBI17_g17504_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 3.3e-07 60.1 215 27.0
PGSC0003DMG400003927 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.3e-07 60.1 215 28.4
PGSC0003DMG400014336 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.3e-07 60.1 210 27.1
PGSC0003DMG400027899 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.3e-07 60.1 241 26.1
vmacro11301 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 4.3e-07 59.7 213 28.6
MBI17_g17509_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 5.6e-07 59.3 209 29.7
PGSC0003DMG400024650 Solanum tuberosum HOM05D000151 ORTHO05D000074 5.6e-07 59.3 212 24.5
Peaxi162Scf00111g00720 Petunia axillaris HOM05D000151 ORTHO05D000074 9.5e-07 58.5 212 26.4
Cc08_g14740 Coffea canephora HOM05D000151 ORTHO05D000074 1.2e-06 58.2 216 30.6
FAN20G0623 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.2e-06 58.2 219 28.8
FAN24G1821 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.2e-06 58.2 76 43.4
TAR636G2429 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-06 58.2 217 27.6
FAN13G0841 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.6e-06 57.8 191 28.8
FAN24G1140 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.7e-06 56.2 219 28.3
Nitab4.5_0003015g0050 Nicotiana tabacum HOM05D000151 ORTHO05D000074 4.7e-06 56.2 213 28.6
FAN20G2617 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.0e-06 55.5 73 46.6
FAN25G0460 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.0e-06 55.5 103 35.0


User provided reference genes

Program Settings