Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 2.1e-117 425.6 203 100.0
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 2.1e-117 425.6 203 100.0
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 2.3e-116 422.2 203 99.0
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 9.1e-113 410.2 203 96.1
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 1.6e-109 399.4 203 94.6
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 2.1e-85 319.3 204 78.9
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 3.1e-84 315.5 205 78.0
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 1.9e-81 306.2 204 76.5
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 1.5e-70 270.0 212 67.0
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 6.8e-68 261.2 209 65.6
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 7.6e-67 257.7 208 65.9
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 1.2e-64 250.4 211 63.5
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.6e-64 250.0 210 62.9
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 1.6e-64 250.0 202 63.9
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.0e-63 247.3 187 65.2
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.7e-63 246.5 213 62.4
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.0e-63 245.7 213 62.4
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 3.0e-63 245.7 213 62.0
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.9e-63 245.4 214 62.1
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 5.1e-63 245.0 214 62.1
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 9.6e-62 240.7 213 62.0
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 3.6e-61 238.8 206 64.1
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 8.1e-61 237.7 227 57.3
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 2.4e-60 236.1 204 62.7
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 3.1e-60 235.7 213 59.6
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 8.9e-60 234.2 203 60.1
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 8.9e-60 234.2 204 56.9
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 5.8e-59 231.5 204 62.7
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 3.8e-58 228.8 205 55.1
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 2.4e-57 226.1 204 56.9
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 3.2e-57 225.7 202 57.9
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 4.2e-57 225.3 206 59.7
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 4.6e-56 221.9 203 60.1
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 1.3e-55 220.3 195 57.9
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 1.5e-54 216.9 214 54.7
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 2.1e-53 213.0 221 52.5
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 8.1e-53 211.1 220 51.8
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 5.3e-52 208.4 210 54.8
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 6.9e-52 208.0 211 55.0
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 6.9e-52 208.0 202 55.4
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 1.2e-51 207.2 209 55.5
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.0e-51 206.5 212 53.8
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 2.6e-51 206.1 212 54.2
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 4.4e-51 205.3 212 52.4
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 6.4e-50 201.4 202 52.5
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 4.2e-49 198.7 192 56.8
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 3.5e-48 195.7 210 53.8
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 4.6e-48 195.3 206 53.4
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 3.9e-47 192.2 172 57.6
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 2.1e-45 186.4 199 50.3
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 1.1e-44 184.1 155 58.1
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 3.2e-41 172.6 199 48.7
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 7.1e-41 171.4 205 48.3
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 6.0e-40 168.3 194 49.0
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 1.9e-38 163.3 197 48.2
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 2.1e-37 159.8 156 51.9
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 4.0e-36 155.6 238 42.4
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 6.5e-34 148.3 112 65.2
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 1.4e-33 147.1 143 54.5
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 5.1e-31 138.7 205 42.9
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 2.8e-29 132.9 206 42.7
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 4.8e-29 132.1 183 43.7
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 8.2e-29 131.3 182 45.1
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 8.2e-29 131.3 115 57.4
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 2.6e-27 126.3 183 40.4
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 5.9e-27 125.2 181 42.5
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 5.5e-25 118.6 106 58.5
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 5.5e-25 118.6 219 36.1
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 9.3e-25 117.9 113 54.0
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 1.6e-24 117.1 113 54.0
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 2.7e-24 116.3 174 41.4
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 6.7e-23 111.7 96 59.4
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 9.7e-22 107.8 93 63.4
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 2.0e-19 100.1 96 59.4
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 5.9e-19 98.6 97 56.7
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.1e-17 94.4 98 56.1
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 4.2e-17 92.4 95 48.4
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 3.1e-12 76.3 79 57.0
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 5.9e-11 72.0 64 57.8


User provided reference genes

Program Settings